prot_L-elsbetiae_contig7248.16111.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7248.16111.1
Unique Nameprot_L-elsbetiae_contig7248.16111.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length475
Homology
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BLAST of mRNA_L-elsbetiae_contig7248.16111.1 vs. uniprot
Match: D8LGF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF7_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 3.090e-107
Identity = 332/477 (69.60%), Postives = 353/477 (74.00%), Query Frame = 0 
Query:    1 GESGGGVAGAXXXXXAELPARWAAGETGKVVARFSNPLQVPLEVESITAVVDGAKVQAFPTSVLLPPRAEFHEVLLFVKPLEDGQVILRGVTVEVLSLVTMCKVDKWGRGISLGPRAPPPRTYKSLRATFRKPQQVLTTDTVDIAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGGILVEVIGSGGGSVGLASSEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGAARDGDGKPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFSPDPRMRKGETACRKLRVEGAAPIVRLFRASPPTSEALAGEEIEEVAQFLGGGLSFGGDADADATECLLLLELANDSSFPVFSWRSHSRCRKGLRRQRQRAXXXXXXXXXXXXEGGRELEPTGEGGAE--AGFVEGGVVEIPGGSRRCLPLRIPRLRVRPEGK 475
            G+ GGG +G      AELPARWAAGETG+VVARFSNPLQVPLEVESITAVVDGA+VQAFPTSVLLPPRAEFHE         DGQV+LRGV+VEVLSLVTMC+VDK+GRG+S GPRAPPPRTYKSLRATFR+P+Q LTTDTVDIAA   XXXXXXXXXXXXXXX                            GG  VEVIG G G     SS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEF+PDPRMRKGETACRKLRVE AAP+VRL RASPPTSE LAGEEI EVAQFLGGGLSF  D DAD+TECLL+LELANDS+FPVF WRSH   ++   R R                  R+L     GG E   G   G VVEIP GSRRCL LR+PRLRVRPEG+
Sbjct:  222 GQGGGGDSGGRPG--AELPARWAAGETGRVVARFSNPLQVPLEVESITAVVDGARVQAFPTSVLLPPRAEFHE---------DGQVVLRGVSVEVLSLVTMCRVDKFGRGVSPGPRAPPPRTYKSLRATFRQPKQALTTDTVDIAAXXXXXXXXXXXXXXXXXXEEEGGSPVDSEGNPAEGTGVGF------GGGDVEVIGGGTG----VSSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFTPDPRMRKGETACRKLRVESAAPVVRLSRASPPTSEVLAGEEIVEVAQFLGGGLSF--DGDADSTECLLVLELANDSAFPVFPWRSHRAKQQQQGRHR------------------RQLTAGTIGGPEDGGGLGRGQVVEIPRGSRRCLSLRVPRLRVRPEGR 657
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BLAST of mRNA_L-elsbetiae_contig7248.16111.1 vs. uniprot
Match: A0A6H5J9H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H9_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 1.530e-87
Identity = 331/630 (52.54%), Postives = 355/630 (56.35%), Query Frame = 0 
Query:   16 AELPARWAAGETGKVVARFSNPLQVPLEVESITAVVDGAKVQAFPTSVLLPPRAEFHEVLLFVKPLEDGQVILRGVTVEVLSLVTMCKVDKWGRGISLGPRAPPPRTYKSLRATFRKPQQVLTTDTVDIAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGGILVEV---------IGSGGGSVGLASSEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGAARDGDGKPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFSPDPRMRKGETACRKLRVEGAAPIVRLFRASPPTSEALAGEEIEEV---------------------------------------------------------------------------------------------------------------------------------------------------------------AQFLGGGLSFGGDADADATECLLLLELANDSSFPVFSWRSHSRCRKGLRRQRQRAXXXXXXXXXXXXEGGRELEPTGEGGAE--AGFVEGGVVEIPGGSRRCLPLRIPRLRVRPEGK 475
            AELPARWAAGETG+VV RFSNPLQVPLEVESITAVVDGA+VQAFPTSVLLPPRAEFHEV+LF+KPLEDGQV+LRGV+VEVLSLVTMC+VDK+GRG+S GPRAPPPRTYKSLRATFR+P+Q LTTDTVDIAA   XXXXXXXXXXXXXXX                          +EGG  V+          +G GGG V +     G   XXXXXXXXXXXXXXXXXXXXXXXXXXXX      R+G      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEF PDPRM KGETACRKLRVE AAP+VRL RASPPTSE LAGEEIEEV                                                                                                                                                               AQFLGGGL F  D DAD+TECLL+LELANDS+FPVF WRSH   +K   R R                  R+L     GG E   G   G VVEIPGGSRRCL LR+PRLRVRPEG+
Sbjct:  829 AELPARWAAGETGRVVTRFSNPLQVPLEVESITAVVDGARVQAFPTSVLLPPRAEFHEVVLFIKPLEDGQVVLRGVSVEVLSLVTMCRVDKFGRGVSPGPRAPPPRTYKSLRATFRQPKQALTTDTVDIAAXXXXXXXXXXXXXXXXXXE-------------------------EEGGSPVDSEGNPAEGTGVGFGGGDVEVIGGGTGVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ASPHGREG------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFVPDPRMWKGETACRKLRVESAAPVVRLSRASPPTSEVLAGEEIEEVLELVNQGGPSVGVMEVWTRPCRSTKKPLASAMSLLFSLADSAXXXXXXXXXXXXXXXEFGGEGGSGSAMSSLGLDVGLAXXXXXXXXXXXXXXXXXVVVPGGAVRLALKLRAGQAANRDVVTEVLVKYSEKEGAPFHRQLRLPLRLTIRGGLRVCSLRVAQFLGGGLRF--DVDADSTECLLVLELANDSAFPVFPWRSHRAKQKQQGRHR------------------RQLTAGTIGGPEDGGGLGRGQVVEIPGGSRRCLSLRVPRLRVRPEGR 1406
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7248.16111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGF7_ECTSI3.090e-10769.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9H9_9PHAE1.530e-8752.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 286..313
IPR013935TRAPP II complex, Trs120PFAMPF08626TRAPPC9-Trs120coord: 24..98
e-value: 2.8E-6
score: 25.0
IPR013935TRAPP II complex, Trs120PANTHERPTHR21512TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9coord: 21..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7248contigL-elsbetiae_contig7248:416..9246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7248.16111.1mRNA_L-elsbetiae_contig7248.16111.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7248 416..9246 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7248.16111.1 ID=prot_L-elsbetiae_contig7248.16111.1|Name=mRNA_L-elsbetiae_contig7248.16111.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=475bp
GESGGGVAGAGAGAGAELPARWAAGETGKVVARFSNPLQVPLEVESITAV
VDGAKVQAFPTSVLLPPRAEFHEVLLFVKPLEDGQVILRGVTVEVLSLVT
MCKVDKWGRGISLGPRAPPPRTYKSLRATFRKPQQVLTTDTVDIAADAAA
AAAQAEMEAAAAAAAARAEEEGGGEKGDGEGEKGEGEGEGDEGGILVEVI
GSGGGSVGLASSEAGGGASGSENGEGGGGGGGGGGSGGASGDGAGGAVDG
AARDGDGKPRQQQQQQQQQQHQQQQQGGGGEAGGGEAGEVEEKEQEQEEE
EEEEEEEEEDDEEFSPDPRMRKGETACRKLRVEGAAPIVRLFRASPPTSE
ALAGEEIEEVAQFLGGGLSFGGDADADATECLLLLELANDSSFPVFSWRS
HSRCRKGLRRQRQRAVVAAGGGGGGAEEGGRELEPTGEGGAEAGFVEGGV
VEIPGGSRRCLPLRIPRLRVRPEGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013935TRAPP_II_complex_Trs120