prot_L-elsbetiae_contig7240.16106.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7240.16106.1
Unique Nameprot_L-elsbetiae_contig7240.16106.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length252
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7240.16106.1 vs. uniprot
Match: D7FRL9_ECTSI (Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL9_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 1.190e-98
Identity = 153/240 (63.75%), Postives = 167/240 (69.58%), Query Frame = 0 
Query:    8 HRAVA-GLLLLCPYAASFVSSPSQKQQRLPPHTPHSSSGVLAPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGKPPRSVLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKIQNGSSGHFENRADRVSEDGAPDGFVLTCSTHPTGPGVKLELSANADMWEAYCSRFDDISTQDLLRQTSAGLMRKYRVEHPDYFREEVERQF 246
            HRA A   LLLCP +++FV +     +R P            P  A                                          +GKPPRSVLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAA++QNGSS HFEN ADR+ EDGAPDGFVLTCSTHPTGPGVKL+LSANA+MW+AYC+R DDISTQDLLRQTSA +MRKYRVEHPDYFREEVERQF
Sbjct:   93 HRAAATAALLLCPLSSAFVPALPSPHERRPSAVGRGLVATSTPVVAQTTSPACSTRPRAKRGLHATELGAAADRGGGGEECGDEGKGGEGKPPRSVLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAARVQNGSSSHFENSADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMWDAYCARLDDISTQDLLRQTSAEVMRKYRVEHPDYFREEVERQF 332
[Close]
BLAST of mRNA_L-elsbetiae_contig7240.16106.1 vs. uniprot
Match: A0A836CQ20_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ20_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.480e-26
Identity = 56/157 (35.67%), Postives = 88/157 (56.05%), Query Frame = 0 
Query:  104 ERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKIQNGSS------------GHFENRADRVSEDGAPD-GFVLTCSTHPTGPGVKLELSANADMWEA-YCSRFDDISTQDLLRQTSAGLMRKYRVEHPDYFREEVERQF 246
            E+ W+V  + HGE   + ++P D+IL+AAE++G+   Y+CRRGNC++CA + +  SS            G     +D    D A D GF L+C ++P GPG+++EL    + W+  YC R  D +T+    +  A + R Y   +PD F  ++ERQF
Sbjct:    8 EKTWEVTFELHGEETTVLMRPDDTILQAAELAGLRAPYDCRRGNCLTCAGRFKAASSYNLVTTLRQEAGGAVTLDSDTFLCDEAKDEGFFLSCCSYPVGPGLRVELGVQKEAWQIQYCDRLRDEATRAAALEAVAQVQRGYSERNPDKFVADLERQF 164
[Close]
BLAST of mRNA_L-elsbetiae_contig7240.16106.1 vs. uniprot
Match: A0A0G4EXA3_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EXA3_VITBC)

HSP 1 Score: 79.3 bits (194), Expect = 4.380e-15
Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = 0 
Query:  105 RPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKIQNGSSGH-FENRADRVSEDGAPDGFVLTCSTHPTGPGVKLELSANADMWEAYCSRFD 211
            R W +E+++ G+   + V  G S+LEAAE    +   +CR G C SCA +I  G  G  +    D + E     G+VLTC T+  GPG+K+EL+ N +++     RF+
Sbjct:   18 RSWTIELNYDGDIETVEVPEGTSVLEAAETVWEDPPCDCRNGVCTSCAGRIVGGKLGEAYVINRDSLEEVTKDKGYVLTCQTYVCGPGLKVELNKNEEVYGMQYGRFE 125
[Close]
BLAST of mRNA_L-elsbetiae_contig7240.16106.1 vs. uniprot
Match: A0A6V1VDI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VDI3_HETAK)

HSP 1 Score: 78.2 bits (191), Expect = 3.100e-14
Identity = 35/112 (31.25%), Postives = 62/112 (55.36%), Query Frame = 0 
Query:  107 WDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKIQNGSSG-HFENRADRVSEDGAPDGFVLTCSTHPTGPGVKLELSANADMWEAYCSRFDDISTQD 217
            W++E+   G  +++TV   D +LEAAE    +  + CR G C +C+ +I  G  G +++     + E     GF ++C TH TGPGVK+EL+    ++E    +++  + +D
Sbjct:   50 WEIELTLDGVTKMVTVSEADCVLEAAEKVFDDPPFSCRNGVCTTCSCRIVEGKEGENYKLAVHGLGETALSQGFTMSCQTHVTGPGVKIELNQYDTVYEMQYGQYEKGTAKD 161
[Close]
BLAST of mRNA_L-elsbetiae_contig7240.16106.1 vs. uniprot
Match: A0A7S4F9M2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F9M2_CHRCT)

HSP 1 Score: 77.8 bits (190), Expect = 3.690e-14
Identity = 40/112 (35.71%), Postives = 62/112 (55.36%), Query Frame = 0 
Query:  101 SVLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKIQNGSSGHFENRADR-VSEDGAPDGFVLTCSTHPTGPGVKLELSANADMWEA-YCSRF 210
            +V++R W V V    +  V+ V  G  +L A E +G+    +CRRGNC+SCAA+I NG+      R +  +  +    GFVL CS +  G G+++E+    ++WE  Y  RF
Sbjct:   17 AVVKRAWPVTVHIGRQAHVLRVPEGQPVLLALEAAGLLPGSDCRRGNCLSCAARIINGAPFSLRVRDNTALCSEAHESGFVLLCSAYVCGKGLEIEVDMEGEVWELQYSKRF 128
[Close]
BLAST of mRNA_L-elsbetiae_contig7240.16106.1 vs. uniprot
Match: A0A4D9D796_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D796_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.650e-13
Identity = 38/111 (34.23%), Postives = 63/111 (56.76%), Query Frame = 0 
Query:  107 WDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKIQNGSSGHFENRADRVSEDGAPDGFVLTCSTHPTGPGVKLELSANADMWEAYCSRFDDISTQD 217
            WDV++ + GE +V+TV     ILEAAE    ++   CR G C +CA ++        E     +S + + +GFVLTC THP GPG+++EL     ++E+   +++  +T +
Sbjct:   55 WDVKMTYKGETKVLTVSEDTCILEAAEKE-WDVPCSCRNGICTTCAGRVIANPDSKKE-AIHGLSAEQSKNGFVLTCQTHPCGPGLEVELGMYDTVYESQYGQYEKKATTE 163
[Close]
BLAST of mRNA_L-elsbetiae_contig7240.16106.1 vs. uniprot
Match: A0A0M0K3H8_9EUKA (Ferredoxin (2fe-2s) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K3H8_9EUKA)

HSP 1 Score: 76.3 bits (186), Expect = 3.410e-12
Identity = 45/115 (39.13%), Postives = 63/115 (54.78%), Query Frame = 0 
Query:   99 PRSVLERPWDVE-VDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKIQNGSSGHFENRADRVSEDGAP-DGFVLTCSTHPTGPGVKLELSANADMWEA-YCSRF 210
            P S   R WDV  V    +R  ++V    S+L AAE++G+    +CRRG C+SCAA++ +GS       +D    D A  +G VL CS +P GP ++L+L A  D  E  Y  RF
Sbjct:  417 PSSNPSRVWDVTLVSADEQRHTLSVAENQSVLRAAELAGLLPCSDCRRGRCLSCAARVVSGSKFSLAVDSDTALCDEAHVEGIVLLCSAYPRGPNLELKLDAEGDALEIQYEKRF 531
[Close]
BLAST of mRNA_L-elsbetiae_contig7240.16106.1 vs. uniprot
Match: A0A0G4EFE2_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFE2_VITBC)

HSP 1 Score: 71.6 bits (174), Expect = 8.240e-12
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 0 
Query:  109 VEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKIQNGSSGH-FENRADRVSEDGAPDGFVLTCSTHPTGPGVKLEL 196
            V+V  +G+   +TV PGDSILEAAE +G+ L ++CR G C+ C AK+ +GS  H      D V+E G    + L C   P    V +E+
Sbjct:   68 VKVSINGDTYDVTVNPGDSILEAAEEAGLELPHDCRLGTCLQCTAKVVSGSVDHGMGTLDDEVTEAG----YTLACQATPLSDDVHIEI 152
[Close]
BLAST of mRNA_L-elsbetiae_contig7240.16106.1 vs. uniprot
Match: A0A7S2BT51_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BT51_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.870e-11
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 0 
Query:  122 VQPGDSILEAAEMSGMNLSYECRRGNCISCAAKI--QNGSSGHFENRADRVS----EDGAPDGFVLTCSTHPTGPGVKLELSANADMWEA-YCSRFDDISTQDLLRQTSAGLMRKYRVEHPDYFREEVERQFNE 248
            ++   +IL+  E  G+    ECRRGNC+SC+ K+  ++ +S H  +     +    +D   +GF+LTC ++ TGPGV L L    + ++  Y  RF     + L  + SA  MR++   +P  F   VE+QF E
Sbjct:   20 IRKDQTILDLCEEMGLRPPSECRRGNCLSCSGKLLPESTTSVHTVDETGDCNVFLCDDARREGFLLTCVSYVTGPGVVLHLEQAHEAYKVQYVKRFKKKDVEVLGVEASAQAMREWGERNPAKFIGIVEKQFAE 153
[Close]
BLAST of mRNA_L-elsbetiae_contig7240.16106.1 vs. uniprot
Match: A0A7R9YXN5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YXN5_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.870e-10
Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 0 
Query:  141 YECRRGNCISCAAKIQNGSSGHFENRADR-----VSEDGAPDGFVLTCSTHPTGPGVKLELSANADMWE-AYCSRFDDISTQDLLRQTSAGLMR 228
            +ECRRGNC++CA +   GS+     R +      +SE+    G+VLTCS++  G GVKL+L +N+D WE  + SR     T+       A LMR
Sbjct:    9 FECRRGNCLTCAGRHAEGSATSNLRRGEDGLSPYLSEEVRGLGYVLTCSSYVEGDGVKLDLGSNSDAWEDVHTSRLQSPETERTGLAAQAKLMR 102
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7240.16106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRL9_ECTSI1.190e-9863.75Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A836CQ20_9STRA2.480e-2635.672Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A0G4EXA3_VITBC4.380e-1536.112Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A6V1VDI3_HETAK3.100e-1431.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4F9M2_CHRCT3.690e-1435.71Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A4D9D796_9STRA4.650e-1334.232Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A0M0K3H8_9EUKA3.410e-1239.13Ferredoxin (2fe-2s) n=1 Tax=Chrysochromulina tobin... [more]
A0A0G4EFE2_VITBC8.240e-1240.452Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S2BT51_9STRA7.870e-1132.84Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7R9YXN5_9STRA1.870e-1039.36Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 100..202
e-value: 3.8E-19
score: 70.4
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 114..188
e-value: 2.3E-10
score: 40.3
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 107..200
score: 11.271
NoneNo IPR availablePANTHERPTHR43112FAMILY NOT NAMEDcoord: 42..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..251
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.724
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 109..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7240contigL-elsbetiae_contig7240:3755..8081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7240.16106.1mRNA_L-elsbetiae_contig7240.16106.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7240 2993..8906 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7240.16106.1 ID=prot_L-elsbetiae_contig7240.16106.1|Name=mRNA_L-elsbetiae_contig7240.16106.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp
MVMLSSVHRAVAGLLLLCPYAASFVSSPSQKQQRLPPHTPHSSSGVLAPA
TAAATATATAKTPASSSARATELAATNPGGGGGDGDGAGDGTGAKGKPPR
SVLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCIS
CAAKIQNGSSGHFENRADRVSEDGAPDGFVLTCSTHPTGPGVKLELSANA
DMWEAYCSRFDDISTQDLLRQTSAGLMRKYRVEHPDYFREEVERQFNEPK
A*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012675Beta-grasp_dom_sf
IPR0010412Fe-2S_ferredoxin-type
IPR0360102Fe-2S_ferredoxin-like_sf