prot_L-elsbetiae_contig7237.16098.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7237.16098.1
Unique Nameprot_L-elsbetiae_contig7237.16098.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length390
Homology
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BLAST of mRNA_L-elsbetiae_contig7237.16098.1 vs. uniprot
Match: D8LN18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN18_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 2.280e-49
Identity = 138/273 (50.55%), Postives = 160/273 (58.61%), Query Frame = 0 
Query:  140 DEEGLGLLRQQLSAVQRIRIEHERKDATIAALRLEVSTLSRQREEMLALNRERNGEWLRLVRMEESCRRLGEREREASRRWASEEKAWRKQLSEAQEQYRVERDRTE----------------------------------FRLGSMTERLNSELEGERAKSGDLEEKLRMLREDLAAAEDKSERLTPRVKALEEANEALRGELAAVSGRCSDAELELSRLQVYRPLVEHADSIDRRRGEAEEGLRAATAELGRERESSAAAKEEATQLRSRL 378
            DEEGLGLLRQQLSAVQRIRIEHERKDATIAALRLE S                                      + +RR   EE+AWRKQL + QEQ R ERDR E                                  FR G++TERLN+E+E ERAKS  LE+KLR+L E+LA A     RL P VK+++ ANEALR EL   S R S+ ELEL++L+VYRPLVE AD IDRRR  AEEGLRAATAEL RER++ AAAK+ A +LR  L
Sbjct:  114 DEEGLGLLRQQLSAVQRIRIEHERKDATIAALRLEASA-------------------------------------DTARRCTREEEAWRKQLRDMQEQCRAERDRAEELAALEPALAKARSEAVAXXXXXARDEAGRAEAEFRAGTITERLNAEMERERAKSRGLEDKLRVLEEELAGAN----RLIPEVKSIQGANEALRAELVVASERRSEVELELAQLKVYRPLVERADFIDRRRVAAEEGLRAATAELSRERDALAAAKDGAAELRLAL 345
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7237.16098.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LN18_ECTSI2.280e-4950.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 364..389
NoneNo IPR availableCOILSCoilCoilcoord: 253..287
NoneNo IPR availableCOILSCoilCoilcoord: 295..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7237contigL-elsbetiae_contig7237:2480..7513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7237.16098.1mRNA_L-elsbetiae_contig7237.16098.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7237 2150..7513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7237.16098.1 ID=prot_L-elsbetiae_contig7237.16098.1|Name=mRNA_L-elsbetiae_contig7237.16098.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=390bp
MPSEREPPPRRRKTPTTTTTTATTAAAAARPCRVTPPSPAPRRRRRRREQ
PHAADPASAEEEPTHRTTRIGQPSMASMRGVGRPRGVLDFAFGGGGVGGG
VGVSGGAGVSVGQSTATWRGDGGGSGGGGGDEESGRSAADEEGLGLLRQQ
LSAVQRIRIEHERKDATIAALRLEVSTLSRQREEMLALNRERNGEWLRLV
RMEESCRRLGEREREASRRWASEEKAWRKQLSEAQEQYRVERDRTEFRLG
SMTERLNSELEGERAKSGDLEEKLRMLREDLAAAEDKSERLTPRVKALEE
ANEALRGELAAVSGRCSDAELELSRLQVYRPLVEHADSIDRRRGEAEEGL
RAATAELGRERESSAAAKEEATQLRSRLAEAEAEVARCG*
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