prot_L-elsbetiae_contig723.16086.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig723.16086.1
Unique Name	prot_L-elsbetiae_contig723.16086.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	670

Homology

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BLAST of mRNA_L-elsbetiae_contig723.16086.1 vs. uniprot
Match: D8LM12_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM12_ECTSI)

HSP 1 Score: 597 bits (1540), Expect = 3.530e-205
Identity = 386/668 (57.78%), Postives = 419/668 (62.72%), Query Frame = 0

Query:   12 EEVWARGQRHVKISKLYLKGLLKRGPNIFVALAWSQAFWLFLEATAGNADSRGYVRLSSVACYALTLHTGGHLVLSRYSSGRHKLSHHALEFLLDLITDVVGFAWINFAEEMLAQACIYLRFRASHASTYDLKHASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQVFEVRAKTTLMYAVLAFAASLGAMEAGSVARGLLDWPVDFEETANQFDAGSFALPTSWLITQAVHIGLYGFFYRTAGGQGGRDGGSRGDGDDVVDIRPAASLFLLAYALLCSVVATRVVGGTVAASAIAVDGSATIDGXXXXXXXXXXX-----RNDLVIQAISSYEVTAAQATDAEVTTPGAXXXXXXXXXXXERSQAAPSAFSRGAGS-SHPGREPSLKPDDDGGEGHGSASLAAEALVA--------AAATAEAGRVRRQSLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAIAYASLSTALGVCIMVRGADKLDARIRGDRAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRTAGEXXXXXXXXXXAEMYRD---ALRSFHARRLLVVVGGVSLVVGWAWEEAFDLVLEGLVGEKADAGTVLAKLALAFVSTAVVLGREVRAAAGHGRHGGT-SGGRAAGETGVGDELREPLVAT 661
            +EV+A+G+RH+KISKLYLKGLLKRGPNIFVALAWSQAFWL LEATAGN DSRGYVRLSSVACYAL LH GGHL+L RYSSGR KLSHHALEFLLDL+TDVVGFAWIN AEEMLAQ                                                           VFEVRAKTTL+YA LAFAASLGAME GS+AR LLDWPV FEETANQFDAGSFALPTSWL+TQ VHIGLYGFFYRTAGGQGGR  G  G+ DDVVD+R AASLFLLAYALLCS +ATRV+GGTVAA             XXXX            R+DLVI+AISSY VTAAQA+DA       XX                +++  G G  +  G   S K  D GGE  G+A LA              AA   +A   RR SLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGA AYA+LSTALGVC+MVRGADKL    R    A                              R  G            E  R    A+RS+HARRLLVVVGGVSLVVGWAWEEAFDL LEGL+G++ADA TV+AKL+LA  +T VVLGREVR A      GG       AGE G G  L EPLV T
Sbjct:    2 DEVYAKGRRHLKISKLYLKGLLKRGPNIFVALAWSQAFWLILEATAGNEDSRGYVRLSSVACYALALHAGGHLLLHRYSSGRRKLSHHALEFLLDLVTDVVGFAWINVAEEMLAQ-----------------------------------------------------------VFEVRAKTTLVYAALAFAASLGAMELGSLARSLLDWPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGFFYRTAGGQGGR--GGDGEEDDVVDVRLAASLFLLAYALLCSALATRVIGGTVAAXXXXXXXXXXXXXXXXXLTRSNSGGSTGSRSDLVIRAISSYGVTAAQASDAAXXXXXXXXGDVEASSTPSCGGGRNTSYREGGGDVADVGPSNSTKVGDGGGE-RGAAPLAXXXXXXXXXXXXXXAAGGEDA---RRDSLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGSNRRKNGAGGAVNDSVGGALGS----------------RPGGGYFHVERPEEDGEETRRRDAAVRSYHARRLLVVVGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAKLSLAVAATVVVLGREVRRAGRRDAGGGDLHDHNGAGEGGGG--LLEPLVPT 586

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig723.16086.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig723.16086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LM12_ECTSI	3.530e-205	57.78	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 588..606
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 194..215
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 87..97
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 460..478
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 54..64
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 442..459
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 36..53
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 479..498
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 118..147
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 65..86
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 98..117
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 148..173
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 607..625
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 258..441
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 235..257
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..35
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 626..669
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 216..234
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 569..587
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 499..568
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 174..193
None	No IPR available	TMHMM	TMhelix		coord: 476..498
None	No IPR available	TMHMM	TMhelix		coord: 284..306
None	No IPR available	TMHMM	TMhelix		coord: 236..258
None	No IPR available	TMHMM	TMhelix		coord: 569..588
None	No IPR available	TMHMM	TMhelix		coord: 151..173
None	No IPR available	TMHMM	TMhelix		coord: 442..461
None	No IPR available	TMHMM	TMhelix		coord: 193..215
None	No IPR available	TMHMM	TMhelix		coord: 603..625

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig723	contig	L-elsbetiae_contig723:12175..16230 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig723.16086.1	mRNA_L-elsbetiae_contig723.16086.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig723 11277..16675 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig723.16086.1 ID=prot_L-elsbetiae_contig723.16086.1|Name=mRNA_L-elsbetiae_contig723.16086.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=670bp
MKCDTHMSSGFEEVWARGQRHVKISKLYLKGLLKRGPNIFVALAWSQAFW
LFLEATAGNADSRGYVRLSSVACYALTLHTGGHLVLSRYSSGRHKLSHHA
LEFLLDLITDVVGFAWINFAEEMLAQACIYLRFRASHASTYDLKHASAAA
AAAVIGAAPMVLAVLLLCFTDIISPVLSPPPPPAQVFEVRAKTTLMYAVL
AFAASLGAMEAGSVARGLLDWPVDFEETANQFDAGSFALPTSWLITQAVH
IGLYGFFYRTAGGQGGRDGGSRGDGDDVVDIRPAASLFLLAYALLCSVVA
TRVVGGTVAASAIAVDGSATIDGGGGGGGGDSSSRNDLVIQAISSYEVTA
AQATDAEVTTPGASAAAAAAAAAAERSQAAPSAFSRGAGSSHPGREPSLK
PDDDGGEGHGSASLAAEALVAAAATAEAGRVRRQSLRRGLKAYMRLTVGM
MVGWAYNLWGQVEFRQEELEFRFGPALGAIAYASLSTALGVCIMVRGADK
LDARIRGDRAAAAAAAPGAVNGDGGGGGGFGSGLGGAGRGHRTAGEEEEA
AAAAAAAEMYRDALRSFHARRLLVVVGGVSLVVGWAWEEAFDLVLEGLVG
EKADAGTVLAKLALAFVSTAVVLGREVRAAAGHGRHGGTSGGRAAGETGV
GDELREPLVATDGRGAAVL*