prot_L-elsbetiae_contig7229.16084.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7229.16084.1
Unique Nameprot_L-elsbetiae_contig7229.16084.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length255
Homology
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BLAST of mRNA_L-elsbetiae_contig7229.16084.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 2.290e-5
Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:   29 GGRQKQCGHPGCTTQPSFGMTGSTKRQYCSKHAKRGMVS 67
            G R  QCGH  CT +P++G+ GS KR++CS+HA+ GMV+
Sbjct:   58 GSRMSQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVN 96
[Close]
BLAST of mRNA_L-elsbetiae_contig7229.16084.1 vs. uniprot
Match: A0A6H5KRV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV0_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 4.630e-5
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 0 
Query:   33 KQCGHPGCTTQPSFGMTGSTKRQYCSKHAKRGMVS 67
            K CGHPGC  +PSFG  GSTK ++CS+HA +GMV+
Sbjct:   35 KGCGHPGCIKRPSFGNDGSTKAEFCSQHAWKGMVN 69
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7229.16084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT00_9PHAE2.290e-553.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRV0_9PHAE4.630e-562.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7229contigL-elsbetiae_contig7229:6432..7775 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7229.16084.1mRNA_L-elsbetiae_contig7229.16084.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7229 5919..8072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7229.16084.1 ID=prot_L-elsbetiae_contig7229.16084.1|Name=mRNA_L-elsbetiae_contig7229.16084.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp
MPMTGAGSGRAEGVAASGNSTGAIIQRRGGRQKQCGHPGCTTQPSFGMTG
STKRQYCSKHAKRGMVSAYSKRCGHPGCTTQPIFGMAGSKKREFCSKHSK
PGMIDIKNQKCGHQGCTTRPYFGMVGTKKAEFCSKHAKPGMIDVKSHKCG
HQGCATIPYFGMVGSKKKEFCSKHAKPGMVDVKNKRCGHPGCTTQPYFGM
VGSKKKEFCSKHAKPGMVDVKHKKCGHSGCTTSVNFTGTGSKQGEFCSKH
AKNI*
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