prot_L-elsbetiae_contig722.16069.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig722.16069.1
Unique Nameprot_L-elsbetiae_contig722.16069.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length289
Homology
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BLAST of mRNA_L-elsbetiae_contig722.16069.1 vs. uniprot
Match: D8LGY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY2_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 8.040e-47
Identity = 105/177 (59.32%), Postives = 117/177 (66.10%), Query Frame = 0 
Query:   35 EAMAEAVEV-----PPSQAPARGSVQQXXXXXXXLPPLGFAAVEGVPVARATTSPFAYVGIPLDDTNGGGPGESLSAPLLPXXXXXARSGEVAGARGRVHGDVSLGVGRDFAGAEEAARTSARRDNAAFVEKRGLTESQALSRVAEDLRALEVARVNAKRRDAEGLDMRPHPGNRLE 206
            EA+A  VEV       S  P  G VQQ         P GFAAVEGVPVARAT  PFAYVG+P+DD N        +    P     +     AGA GRVHGDVS+GVG D+ GA EAA+ SARRDNAAF EK+  TE+QA SRV EDLRA+E AR+NAKRRDAEGLDMRPHPGNRLE
Sbjct:   11 EAVAPLVEVMGELEQQSPLPDSGCVQQHQQ------PPGFAAVEGVPVARATMRPFAYVGVPIDDDN-------HNELRRPSTAAASYDNSRAGA-GRVHGDVSVGVGADYDGAAEAAKASARRDNAAFFEKKRFTEAQAKSRVEEDLRAIETARINAKRRDAEGLDMRPHPGNRLE 173
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig722.16069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGY2_ECTSI8.040e-4759.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig722contigL-elsbetiae_contig722:9223..16458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig722.16069.1mRNA_L-elsbetiae_contig722.16069.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig722 9223..16458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig722.16069.1 ID=prot_L-elsbetiae_contig722.16069.1|Name=mRNA_L-elsbetiae_contig722.16069.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=289bp
RGQRKFETTHTVETRAKAGRRKGAETMATIRPGSEAMAEAVEVPPSQAPA
RGSVQQQQQQQQQLPPLGFAAVEGVPVARATTSPFAYVGIPLDDTNGGGP
GESLSAPLLPPPPPPARSGEVAGARGRVHGDVSLGVGRDFAGAEEAARTS
ARRDNAAFVEKRGLTESQALSRVAEDLRALEVARVNAKRRDAEGLDMRPH
PGNRLERTESESSPEEEGWACGAGGGVGKSMGEKEAAGAGGARGGEEARA
SSSSSEGYPCGGYVPAAYVPAEYVIPEYTSVYEKPCQK*
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