prot_L-elsbetiae_contig7214.16063.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7214.16063.1
Unique Nameprot_L-elsbetiae_contig7214.16063.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length278
Homology
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: D7FV16_ECTSI (PUB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV16_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 3.640e-117
Identity = 241/283 (85.16%), Postives = 250/283 (88.34%), Query Frame = 0
Query:    1 RLEDELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSLHESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNATEKKAA------ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLELDERF 277
            RLEDELSKKV+KFE+RL+ETDPV+GAPRYGESMTAKVVALGAKHQ LL+RL Q+EAE+TAAVS HESREAVSAEEA+KREVERQ  XXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXX         XXX X  REREAQEL SSVAVGAAGVEDGLRRIDDACGG   EKKAA      ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLK+ELDERF
Sbjct:   42 RLEDELSKKVSKFERRLNETDPVSGAPRYGESMTAKVVALGAKHQALLERLPQLEAEITAAVSQHESREAVSAEEARKREVERQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTREREAQELASSVAVGAAGVEDGLRRIDDACGGKPAEKKAAVQALQQILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMELDERF 324          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A835YSV6_9STRA (PUB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSV6_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.380e-43
Identity = 135/283 (47.70%), Postives = 170/283 (60.07%), Query Frame = 0
Query:    2 LEDELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSLHESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGG---NATEKKAA-----ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLELDER 276
            +E EL  K+AKFEKRL+ETDP++G  RYGE M AKV  L  ++  L   L   E ++ AA++ H +                 XXXXXXXXXXXXXXXXXXXXXXX      XXX                        XXX    REREA  + +SV VGAAGVE GLR + DACGG   +A  +K       IL+N+ S+PEDPRFRRI+ +NE F   +GRFEG +Q+LLSSGF++ VEEG ++LVM EPDL+ DMDGWT WY  + + ++RL  E + R
Sbjct:   43 VEGELQGKMAKFEKRLTETDPISGQLRYGEGMRAKVAQLQQQYDALAAELRLAEGKLAAALAAHANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLAREAAVLRDKKKADXXXXXXXXXXARLAREREAAAIMASVPVGAAGVEAGLRALRDACGGGGGSAQMRKTCGALLQILQNMRSSPEDPRFRRIRCENERFAADVGRFEGAVQVLLSSGFKVVVEEGASLLVMAEPDLATDMDGWTTWYDTLKDTIDRLNDETNAR 325          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: G4ZJA0_PHYSP (PUB domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA0_PHYSP)

HSP 1 Score: 92.4 bits (228), Expect = 1.360e-18
Identity = 94/276 (34.06%), Postives = 141/276 (51.09%), Query Frame = 0
Query:   10 VAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEA--EVTAAVSLHESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNAT-----EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR--MQVEEGQ--TVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLELD 274
            + KF  R S  DPVT  PR+G +M AKV       Q LL+R  +++   E  A + L E++ A  AE A+++E ER      XXXXX              +  L+         XXXXXXXXX    +E  R        E E ++L +S+  G  G+E  +  + D+ G  A      +K  A++ N+ S+PE+  FR I ++N +F   LG++ GG Q LL+ GF+   Q +E Q   V V+ EPDLSED+D W+ W+  + E    ++ +L+
Sbjct:    2 IEKFRARCSMVDPVTNQPRFGPNMLAKV-------QDLLRRYDEVKLAMEEEAPLRLQEAQRA--AELAREQEQERHLQGARXXXXXQQ------------REELQRIEALAAAAXXXXXXXXXXXXXEELLRQL-----EEEEREKLNASIPHGKEGLERAIAMLKDSTGSEALYRQSLQKLLAVVSNICSSPENTAFRHIPKENAHFHADLGQYAGGHQCLLALGFKELQQGDEAQLRAVFVLEEPDLSEDLDAWSNWFDELKEMQSFVEYKLN 251          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A7S1YSV5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YSV5_TRICV)

HSP 1 Score: 87.4 bits (215), Expect = 5.410e-16
Identity = 92/283 (32.51%), Postives = 143/283 (50.53%), Query Frame = 0
Query:    9 KVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLG------------QIEAEVTAAVSLHESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNATEKKAA------ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 273
            K  +F KRL+E DP+T APRYG     +VVA+  K+  L   +G            Q++ EV A V    +++  + ++ +K+E E                       XX      XXXXXXXXXXXXXXXXXX         XXX XX R        +S+  GA GV + L  + D    + +  + A      I   +A++PE+ ++RRI+RD+  F   +GR  GG ++L+++GF+++  +G +     EPD+  DMDGW+ W+  I + +E ++ E+
Sbjct:  120 KAGRFRKRLAERDPITDAPRYGGKTMGRVVAMLEKYDALRVGIGMAFGGNQPGEGHQMDGEVLADVMRKLAKQEKAIKDQEKQEAETGKVDVESRREAEALALKELQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRA-----FVASIKKGADGVREQLAAMRDGTSSDPSGHRKALDSLHMIFNQIAAHPEEMKYRRIRRDHPKFMEDIGRHPGGKELLIAAGFKLETLDGVSCFFSKEPDIENDMDGWSAWFDAIKQTLEIIEEEM 397          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A6A3IUC9_9STRA (PUB domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IUC9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.600e-15
Identity = 107/292 (36.64%), Postives = 156/292 (53.42%), Query Frame = 0
Query:    5 ELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSLHESREA----VSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAK---------QEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNAT-----EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEG-----QTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 273
            E+   + KF  R S  DPVT  PR+G  M AKV       Q LL+R  +++  +     L    EA    ++AEEA K++   +    XXXXXXXXXXXX        + +LE   XXXXXXXXXXXXXXX AA          +E A XXX       E + L +S+  G  G+E  +  + ++    A      +K  A++ N+ S+PE+  FR I +DN +F   LG++ GG Q LL+ GF+ ++++G     + V V+ EPDLSED+D W+ W+  + E    ++ +L
Sbjct:   60 EMDDMMEKFRARCSMVDPVTNQPRFGPKMLAKV-------QDLLRRYDEVKVAMEEDAPLGLQVEAKINQLTAEEAAKKQ---EQAARXXXXXXXXXXXXLAREQEQERLLLEAREXXXXXXXXXXXXXXXLAAXXXXXXXQRGKERAEXXXXRQLEGEERERLNASIPHGKEGLEKAIAMLRNSTASEALFRQSLQKLLAVVSNICSSPENAAFRHIPKDNAHFHADLGQYAGGPQCLLALGFK-ELQQGDEAHPRAVFVLEEPDLSEDLDAWSNWFDELKEMQSLVESKL 340          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A6U3X4B2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3X4B2_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.710e-15
Identity = 48/140 (34.29%), Postives = 75/140 (53.57%), Query Frame = 0
Query:  149 EREAQE----LTSSVAVGAAGVEDGLRRIDDACGGNAT---EKK--------AAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 273
            E EA+E      +SV  G  GV   +  I +AC  N     EK+          I   + S PE+P+FRRI+RD+  F   +GR  GG +I ++SGFR+   EG +     EP++  DMDGW++W+  + E ++ ++ E+
Sbjct:   78 EEEAREADRAFVASVPRGGDGVRAQIGLIREACRSNTDGSGEKEWNTAIGALHTIFTQIMSRPEEPKFRRIRRDHPKFLEDVGRHPGGKEIFIASGFRLDNIEGVSCFFSKEPNIEHDMDGWSDWFNELKETLQIIEEEM 217          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A8K1FKC0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKC0_PYTOL)

HSP 1 Score: 84.0 bits (206), Expect = 5.220e-15
Identity = 100/281 (35.59%), Postives = 152/281 (54.09%), Query Frame = 0
Query:    2 LEDELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSL---HESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNAT-----EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR-MQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 273
            +E E+   + KF  R +  DPVT  PR+G    AKV+ +  ++  L + +G  E   TA  S+   H+ ++A +            XXXXXXXXXXXXXXXXXXXXXX A+   E   XX             +  +Q    XXX XXX+ER  Q+  +SV VG  G++D +  ++   G   T     +K   ++ NV + PE   +R I +DN +F + +G+++GG + LL+ GF+ ++ E  + V +M EPDLSED+D W+ W+  + +  E L+  L
Sbjct:   52 VEGEVDVTMEKFRARSTMVDPVTNEPRFGPKTLAKVLDMLLRYDALKENVGSGEVLRTARKSIEAFHKEQQAHAQRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRAQELEQXXIAELARLAQQKRIEREQQXXXXXXXXXXXQERLNQQ-NASVQVGVEGLQDAISTLETNLGDPKTFRSVLQKLHVLIGNVCAAPEKTEYRHIPKDNAHFHQDIGQYQGGHECLLTMGFKELEPEPTKRVFIMEEPDLSEDLDRWSAWFDGLKDMKELLEQRL 331          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A833S132_PHYIN (PUB domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S132_PHYIN)

HSP 1 Score: 77.0 bits (188), Expect = 3.520e-14
Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 0
Query:  183 EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR--MQVEEGQ--TVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 273
            +K  A++RN+  +PE+  FR I +DN +F   LG++ GG Q LL+ GF+   Q +E Q   V V+ EPDLSED+D W+ W+  + E    ++ +L
Sbjct:   21 QKLLAVVRNICQSPENAAFRHIPKDNAHFHADLGQYPGGHQCLLAMGFKELQQGDETQPRNVFVLEEPDLSEDLDAWSSWFDELKELQSLVESKL 115          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A3F2RTW5_9STRA (PUB domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RTW5_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 6.410e-14
Identity = 44/135 (32.59%), Postives = 76/135 (56.30%), Query Frame = 0
Query:  153 QELTSSVAVGAAGVEDGLRRIDDACGGNAT-----EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQT-----VLVMNEPDLSEDMDGWTEWYKHITEAVERLKLELDERF 277
            + L +S+  G  G+E+ +  + D+ G  A       K  A++ N+ S+PE+  FR I + N NF   LG++ GG Q +L+ GFR ++++G +     V V+ EPDLSED D W+ W+  + +    +K  ++ +F
Sbjct:  124 ERLNASIQHGKEGLENAITMLQDSTGSEALFHRSLGKLLAVVSNICSSPENAAFRHIPKGNANFHTDLGQYTGGHQCILALGFR-ELQQGDSTQSRAVFVLEEPDLSEDFDAWSNWFDELKD----MKSLIESKF 253          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: F0WG38_9STRA (Uncharacterized protein AlNc14C87G5567 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG38_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 7.340e-14
Identity = 78/272 (28.68%), Postives = 121/272 (44.49%), Query Frame = 0
Query:    4 DELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSLHESRE-AVSAEEAQ----KREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXR-EREAQELTS---SVAVGAAGVEDGL----RRIDD-ACGGNATEKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEE--GQTVLVMNEPDLSEDMDGWTEWY 259
            ++LS  V++ EKR    DPVT APR+G  M  KV AL       ++R    + E+  +  L + +   +   E +    K +VE+                      XX                        QA ++  AR   +   R + E Q+L +   +V +G  G+   L    R +DD A   +  +K   I+ N+ S PE   +R+I +DN  FQ   G+FEGG   LLS GF+   +E   +T+  + EPD++EDMD WT+W+
Sbjct:   63 EKLSTLVSRLEKRTKMMDPVTKAPRFGPRMLEKVNAL-------IRRFDAWKLELETSDVLRDIKSMGLCLRERKLCKLKEKVEQSRLSKVEEVRREHELLQMVREDXXXXXXXRIVKDEIERQNLTMLARQAQAIREAKARKLEEDALRSDEELQKLNAQKEAVVLGKEGLRQALLTLERNVDDKALYRSKLDKVHKIVSNICSEPEKELYRKIDKDNYRFQEDFGKFEGGYHFLLSMGFKEVYDEIESKTMFYLEEPDVNEDMDAWTDWF 327          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FV16_ECTSI3.640e-11785.16PUB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YSV6_9STRA2.380e-4347.70PUB domain-containing protein n=1 Tax=Tribonema mi... [more]
G4ZJA0_PHYSP1.360e-1834.06PUB domain-containing protein n=1 Tax=Phytophthora... [more]
A0A7S1YSV5_TRICV5.410e-1632.51Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6A3IUC9_9STRA1.600e-1536.64PUB domain-containing protein n=5 Tax=Phytophthora... [more]
A0A6U3X4B2_9STRA3.710e-1534.29Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8K1FKC0_PYTOL5.220e-1535.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A833S132_PHYIN3.520e-1440.00PUB domain-containing protein n=1 Tax=Phytophthora... [more]
A0A3F2RTW5_9STRA6.410e-1432.59PUB domain-containing protein n=3 Tax=Phytophthora... [more]
F0WG38_9STRA7.340e-1428.68Uncharacterized protein AlNc14C87G5567 n=1 Tax=Alb... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..155
NoneNo IPR availableGENE3D1.20.58.2190coord: 180..257
e-value: 4.9E-14
score: 53.7
IPR018997PUB domainSMARTSM00580PGNneucoord: 188..245
e-value: 1.4E-5
score: 34.5
IPR018997PUB domainPFAMPF09409PUBcoord: 188..250
e-value: 2.8E-13
score: 49.6
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 188..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7214contigL-elsbetiae_contig7214:1751..5861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7214.16063.1mRNA_L-elsbetiae_contig7214.16063.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7214 1751..5861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7214.16063.1 ID=prot_L-elsbetiae_contig7214.16063.1|Name=mRNA_L-elsbetiae_contig7214.16063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=278bp
RLEDELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQR
LGQIEAEVTAAVSLHESREAVSAEEAQKREVERQEEEEARVRIRLAEAEE
ERRRAVAAQSILERDRERQAAEANRSREEREQAAKQEAARQAEDKRRRER
EAQELTSSVAVGAAGVEDGLRRIDDACGGNATEKKAAILRNVASNPEDPR
FRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSE
DMDGWTEWYKHITEAVERLKLELDERF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR036339PUB-like_dom_sf