prot_L-elsbetiae_contig721.16060.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig721.16060.1
Unique Nameprot_L-elsbetiae_contig721.16060.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1098
Homology
BLAST of mRNA_L-elsbetiae_contig721.16060.1 vs. uniprot
Match: A0A6H5JNQ0_9PHAE (KIX_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ0_9PHAE)

HSP 1 Score: 843 bits (2177), Expect = 7.520e-284
Identity = 668/1169 (57.14%), Postives = 721/1169 (61.68%), Query Frame = 0
Query:    6 GATPGMVGVSSGMSLPAG-------------------QHDAVLKEERAKQQRSHRAEELRNIYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRCHDTGHVPSAASLQSLEHTLIRVHKASNALQVMIRDHSKTQNQNNLQYGSSGMPQVSRPPPPSV-----SRQYSG--NDFSPAPPSLSQSSSTLGALGSAAG---TPVSSVG--ITGSMDPGD--ALNLDPIPLAESASAFRTPQQXXXXXXXXXXXXXXXXXXXXAAQ----QLQAXXXXXXXXXXXXXXXXXXXXXXXXXQQKAAHERQXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXXXXXQQSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXTASNAASSSLPDARPSLLRGESS-DMFWNSVDMGDLEPTPLSGSLEDQAIPTNLDAGGGDFDMPVEDFFDLDPFPXXXMPLDGEDWLSTQTLPEEGSGKPSGSALT-----DPSASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLQLLPTQ-------QPAAGGFAPAGNGGAPGGAPTMSADTIPEPLPQTVVDRLHAVVADGGPAAANLGRLARTVSAQLGFREQGSTAAAADSARPYLGGAAQDPELLAAEASLGXXXXXXVVAGATPMP----TVSGLRSAGKTLGRQAHSAFEAMATAADVNKGNPALLPNVISHQLGPLPRLLDGLVSGCTAVVPSPSASTVPAXXXXXXXXXXXXXXDGASSPP---------LSNKRAK-ESDDADFGRPEKKIALGERGEQKSGLASSFPASGGGGGDSAGIATVKSENGQGASSSPATVAPPASS----------NLLARPASADFRHGGGEELMALLKAKVGRLFSLDAEYTHVRMGDVPQNGTPAARGGE-GTKDE-GKGGASANGSAVASXXXXXXXXXXXXXXXXXLRRVVSRLRAERAGQFVVHIKFDVAGENACRPCDVSVLSWNEAQESGVGGNAGVAAGGA---VKTDGEQNGAGDFMAAVGGSTPWRTSQHTAFVRVSGHAFQALHDFVDKQPTGDVGEALVSFLAWMSKYDRLFQDPCKIANKLVATDSGTGEPLPPTLRTSDGDALLAESLAGTTQREPQSPXXXXXXXSATSSGAV 1095
            G++ GMVGVS+GM +  G                   QH+A LKEERAKQ RS RAEELR IYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRCH+TGHVPSAASLQSLEHTLIRVHKASNALQVMIRDHSKTQ      YG  G                 SRQYS   N FSP      QS+STLG LG  AG   TPV SVG  +TGS+D GD  AL+LD IPL ++ + +RTPQQXXXXXX                +    QLQ XXXXXXXXXXXXXXXXXXXXXXXX QQ+    +Q XXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXX                                        ++A+S +LPDAR  L +GESS DMFW SVD+GDLEPTPLSG LEDQ IP NL+ GG DFDMPVEDF DLDPFP   MPLDG+DWLSTQ LPE    KP GS        D SA G                               GLQ    Q       Q + GG  P GNG A G AP   AD IPEPLPQTVVDRL AVVA GG AA+NLGRLA +VSAQLGFR  GSTAAAADS+R YLGGAAQDP+LLAAEASLG                   T SGLRSAG+TL RQA+SAFEAMATAADVNKGNPALL NVI+HQLGP+PRLL+GLVSGCT VVP+PS + VP               DG +            LSNKR K E  D D GRPEKKIALG                                                            NLLARPASADFRHGGGEELMALL+AKVGRLFSL AEYTHVR G +  NG+ AA GGE G K E G             XXXX             LRRV+SR++A RAG FVVHI FDVAG N CRPCDVSVLSWNEAQE         +AGGA   VK +G     G FM  V GS PWR SQHTAFVRVSGHAFQALH FV+K+  G+VGEAL SFL WM+ YDR+FQDPC IANKLVATDSGTGEPLPPTLRTSDG ALLAESLAGT QREPQSP       +A  +G  
Sbjct:  271 GSSTGMVGVSAGMVMSTGHTGGGGVGAVGGGSGTSTGQHEAALKEERAKQHRSRRAEELRTIYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRCHETGHVPSAASLQSLEHTLIRVHKASNALQVMIRDHSKTQ------YGGCGXXXXXXXXXXXXXXQQPSRQYSADQNAFSPG-----QSNSTLGPLGGTAGGVVTPVCSVGPTLTGSIDGGDSAALSLDAIPLPDTGTGYRTPQQXXXXXXNFLRQTQQQVGTARRQRAHQLQLQXXXXXXXXXXXXXXXXXXXXXXXXXLQQQQLXXQQNXXXXXXXXXXXXXXXXXXXXXXXMPFRQXXXXXXXXXXXXXXX----------------------------------------ASASSGALPDARLLLAQGESSNDMFWGSVDIGDLEPTPLSGPLEDQVIPPNLEEGG-DFDMPVEDFLDLDPFPLEGMPLDGDDWLSTQCLPEGSGNKPGGSPRAGNNSMDSSAVGGCGGASTRPGAYVPPPGALGDSGAGGLAVSSGLQQQQQQGLPQLQTQLSVGGLTPLGNG-ASGVAPINPADPIPEPLPQTVVDRLAAVVAGGGTAASNLGRLAGSVSAQLGFRAPGSTAAAADSSRSYLGGAAQDPDLLAAEASLGMGQSGRASGXXXXXXCGALTASGLRSAGQTLCRQANSAFEAMATAADVNKGNPALLHNVINHQLGPMPRLLNGLVSGCTVVVPAPSVAAVPPARSGSRGSGAAQ--DGTAXXXXXXXXXXXALSNKRTKDECGDGDDGRPEKKIALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLARPASADFRHGGGEELMALLRAKVGRLFSLSAEYTHVRTGGMSGNGSSAALGGEVGKKQEDGLTXXXXXXXXXXXXXXXTAGDVKPDVGGGGLRRVLSRVKAVRAGHFVVHINFDVAGSNECRPCDVSVLSWNEAQEG-----ESASAGGADARVKVEG-----GGFMDTVHGSKPWRASQHTAFVRVSGHAFQALHGFVNKRTDGNVGEALASFLTWMANYDRVFQDPCTIANKLVATDSGTGEPLPPTLRTSDGSALLAESLAGTPQREPQSPASSQTASTAAGTGVA 1374          
BLAST of mRNA_L-elsbetiae_contig721.16060.1 vs. uniprot
Match: D7FX92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX92_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 1.360e-135
Identity = 340/714 (47.62%), Postives = 379/714 (53.08%), Query Frame = 0
Query:  392 LRGESS-DMFWNSVDMGDLEPTPLSGSLEDQAIPTNLDAGGGDFDMPVEDFFDLDPFPXXXMPLDGEDWLSTQTLPEEGSGKPSGSALTDPSASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLQLLPTQQPAAGGFAPAGNGGAPGGAPTMSADTIPEPLPQTVVDRLHAVVADGGPAAANLGRLARTVSAQLGFREQGSTAAAADSARPYLGGAAQDPELLAAEASLGXXXXXXVVAGATPMPTVSGLRSAGKTLGRQAHSAFEAMATAADVNKGNPALLPNVISHQLGPLPRLLDGLVSGCTAVVPSPSASTVPAXXXXXXXXXXXXXXDGASSPPLS-------NKRAK-ESDDADFGRPEKKIALGERGEQKSGLASSFPASGGGGGDSAGIATVKSENGQGASSSPATVAPPASS----------NLLARPASADFRHGGGEELMALLKAKVGRLFSLDAEYTHVRMGDVPQNGTPAARGGEGTKDEGKGGAS------ANGSAVASXXXXXXXXXXXXXXXXXLRRVVSRLRAERAGQFVVHIKFDVAGENACRPCDVSVLSWNEAQESGVGGNAGVAAGGAVKTDGEQNGAGDFMAAVGGSTPWRTSQHTAFVRVSGHAFQALHDFVDKQPTGDVGEALVSFLAWMSKYDRLFQDPCKIANKLVATDSGTGEPLPPTLRTSDGDALLAESLAGTTQREPQSP 1080
            ++GESS DMFW SVD+GDLEPTPLSGSLEDQ IP NL+ GG DFDMPVEDF DLDPFP   MPL+G+DWLSTQ+LPE    KP GS    P A                                     +     A GG          GGA T     +P P               G   A+  G LA  VS+ L  ++Q                  Q    L  + S+G         G TP             LG  A S    +  A  + +GNPALL NVI+HQLGP+PRLL+GLVSGCT VVP+PS + VP XXXXXXXXXXXXXX                NKR K E  D D GRP                                                                   NLLARPASADFRHGGGEELMA LKAKVGRLFSL AEYTHVR G VP+NG+PAA GG     + + G +              XXXXX            LRRV++R++A RAG FVVHIKFDVAG N CRPCDVSVLSWNEAQE       G  A   VK +G     G FM  V GS PWRTSQHTAFVRVSGHAFQALH +V+K+  G+VGEALVSFL WM+ YDR+FQDPC IANKLVATDSGTGEPLPPTLRT DG ALLAESLAGT QREPQSP
Sbjct:    1 MQGESSNDMFWGSVDIGDLEPTPLSGSLEDQVIPPNLEEGG-DFDMPVEDFLDLDPFPLEGMPLEGDDWLSTQSLPEGSGNKPGGS----PRAGN-----------------------------------VSMDSSAVGGS---------GGASTRPGAYVPPP---------------GALGASGAGGLA--VSSGLQQQQQ------------------QGLPQLQTQLSVG---------GLTP-------------LGNGA-SGVAPINPADPIPEGNPALLQNVINHQLGPMPRLLNGLVSGCTVVVPAPSVAAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRTKDECGDGDDGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLARPASADFRHGGGEELMARLKAKVGRLFSLSAEYTHVRTGVVPENGSPAALGGGEVGKKQEAGLTNXXXXXXXXXXXXXXXXXXAGDVKSDVGGGGLRRVLARVKAVRAGHFVVHIKFDVAGSNECRPCDVSVLSWNEAQEGESASTGGADA--RVKVEGGGQSGGGFMDTVHGSKPWRTSQHTAFVRVSGHAFQALHGYVNKRTDGNVGEALVSFLTWMANYDRVFQDPCTIANKLVATDSGTGEPLPPTLRTPDGSALLAESLAGTPQREPQSP 605          
BLAST of mRNA_L-elsbetiae_contig721.16060.1 vs. uniprot
Match: A0A835Z449_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z449_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.190e-14
Identity = 52/98 (53.06%), Postives = 64/98 (65.31%), Query Frame = 0
Query:   42 AEELRNIYQEDIHYFVQHGSSLLKKLHKTRPASQ------NSEQVLKLVQYVKEGHNALLYINRCHDTGHVPSAASLQSLEHTLIRVHKASNALQVMI 133
            AE+LR  Y+ DI  FVQ G S+L K H   P S        ++Q+ KL QYV+EG NAL+Y+ RCH  GHVPSA SLQSLE TL +VH AS  L+ M+
Sbjct:  447 AEQLRRRYEADIRAFVQQGRSVLLK-HDGSPRSMAAHGSGGADQIRKLRQYVREGQNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQMM 543          
BLAST of mRNA_L-elsbetiae_contig721.16060.1 vs. uniprot
Match: A0A836CHY1_9STRA (KIX_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY1_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.350e-6
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 0
Query:   79 QVLKLVQYVKEGHNALLYINRCHDTGHVPSAASLQSLEHTLIRVHKASNALQVM 132
            +V KLVQY++EG NAL+Y+ RCH   H+PS  SL+SL  TL +VHKAS AL+ M
Sbjct:   70 RVRKLVQYIREGQNALMYMERCHLQHHIPSGPSLESLHLTLQKVHKASLALRSM 123          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig721.16060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JNQ0_9PHAE7.520e-28457.14KIX_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FX92_ECTSI1.360e-13547.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z449_9STRA3.190e-1453.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHY1_9STRA1.350e-659.26KIX_2 domain-containing protein n=1 Tax=Tribonema ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 242..324
NoneNo IPR availableCOILSCoilCoilcoord: 345..377
NoneNo IPR availablePANTHERPTHR21704:SF18NIPPED-B-LIKE PROTEINcoord: 302..736
IPR021627Mediator complex, subunit Med27PFAMPF11571Med27coord: 981..1060
e-value: 5.7E-11
score: 42.6
IPR033031SCC2/Nipped-B familyPANTHERPTHR21704NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATEDcoord: 302..736

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig721contigL-elsbetiae_contig721:22892..29066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig721.16060.1mRNA_L-elsbetiae_contig721.16060.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig721 22890..30204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig721.16060.1 ID=prot_L-elsbetiae_contig721.16060.1|Name=mRNA_L-elsbetiae_contig721.16060.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1098bp
MCGGGGATPGMVGVSSGMSLPAGQHDAVLKEERAKQQRSHRAEELRNIYQ
EDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRC
HDTGHVPSAASLQSLEHTLIRVHKASNALQVMIRDHSKTQNQNNLQYGSS
GMPQVSRPPPPSVSRQYSGNDFSPAPPSLSQSSSTLGALGSAAGTPVSSV
GITGSMDPGDALNLDPIPLAESASAFRTPQQQQQQQQQQYLRQQQQQRQR
RAAQQLQAQQLQAQQQQQLQAQQLQQQQLQQQQQQKAAHERQQQQEINVR
RQRQQQLQLQQQQQQLQLQQQQRQHQLQVQQQHQQHQLPYRQQQSAQQQQ
QAQQLQLQQQQLQQQQQQQQLQQATASNAASSSLPDARPSLLRGESSDMF
WNSVDMGDLEPTPLSGSLEDQAIPTNLDAGGGDFDMPVEDFFDLDPFPLD
GMPLDGEDWLSTQTLPEEGSGKPSGSALTDPSASGGGGVGATTRPGAYMP
PPTGAVSTAAAAAASSGLQLLPTQQPAAGGFAPAGNGGAPGGAPTMSADT
IPEPLPQTVVDRLHAVVADGGPAAANLGRLARTVSAQLGFREQGSTAAAA
DSARPYLGGAAQDPELLAAEASLGLGLGLGVVAGATPMPTVSGLRSAGKT
LGRQAHSAFEAMATAADVNKGNPALLPNVISHQLGPLPRLLDGLVSGCTA
VVPSPSASTVPAAAGGGGGGGGGVAKDGASSPPLSNKRAKESDDADFGRP
EKKIALGERGEQKSGLASSFPASGGGGGDSAGIATVKSENGQGASSSPAT
VAPPASSNLLARPASADFRHGGGEELMALLKAKVGRLFSLDAEYTHVRMG
DVPQNGTPAARGGEGTKDEGKGGASANGSAVASTAAEEDAKRATGGGGGG
LRRVVSRLRAERAGQFVVHIKFDVAGENACRPCDVSVLSWNEAQESGVGG
NAGVAAGGAVKTDGEQNGAGDFMAAVGGSTPWRTSQHTAFVRVSGHAFQA
LHDFVDKQPTGDVGEALVSFLAWMSKYDRLFQDPCKIANKLVATDSGTGE
PLPPTLRTSDGDALLAESLAGTTQREPQSPPSPPPAASATSSGAVAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021627Mediator_Med27
IPR033031SCC2/Nipped-B