prot_L-elsbetiae_contig7196.16032.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7196.16032.1
Unique Nameprot_L-elsbetiae_contig7196.16032.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length239
Homology
BLAST of mRNA_L-elsbetiae_contig7196.16032.1 vs. uniprot
Match: D7FMA7_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA7_ECTSI)

HSP 1 Score: 421 bits (1081), Expect = 2.930e-147
Identity = 207/238 (86.97%), Postives = 217/238 (91.18%), Query Frame = 0
Query:    1 MRTNLKQNPAWSRAPPPTDDFLLMFLRSEVFRPDKAADRYRKFWKVKVALCGEDKAVLPIKVEDAREGLDLEFCQIVPGSKDREGRHVVVVNTGQADKSLDRTVRVLAVWYVLMAALEDVETQRKGFCFVVNLKTSRISQVDQKFNKMVLDSIQGTLPVRVGSMNMCYAPSFFRVIWMVISTFLHERVRQRFRFFYGTDEAVLEALESTVAPENLPPPMGQKPLDFQGWLAERIKAEV 238
            MR NLK+ PAWSRAPPPTDDFLLMFLRSEVF+P KAADRYRKFWKVKV LCGEDKA  PIKVEDAR GLD EFCQIVPGSKDREGR VV+VNTGQADK+LDR +RV AVWYVL+AALEDVETQRKGFCFVV LKT+RISQVDQKFNKMVLDSIQG+LPVRVGSMNMCY PSFFR IWMVISTFLHERVR RFRF YG DE VLEAL  TVAPENLPPP+G+KPLDFQGWLAER KAEV
Sbjct:   42 MRANLKKVPAWSRAPPPTDDFLLMFLRSEVFKPHKAADRYRKFWKVKVGLCGEDKAAFPIKVEDARLGLDREFCQIVPGSKDREGRQVVLVNTGQADKTLDRKMRVRAVWYVLLAALEDVETQRKGFCFVVTLKTARISQVDQKFNKMVLDSIQGSLPVRVGSMNMCYPPSFFRWIWMVISTFLHERVRARFRFIYGEDEDVLEALTGTVAPENLPPPIGRKPLDFQGWLAERQKAEV 279          
BLAST of mRNA_L-elsbetiae_contig7196.16032.1 vs. uniprot
Match: D7FMA8_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA8_ECTSI)

HSP 1 Score: 299 bits (765), Expect = 8.670e-100
Identity = 141/238 (59.24%), Postives = 180/238 (75.63%), Query Frame = 0
Query:    1 MRTNLKQNPAWSRAPPPTDDFLLMFLRSEVFRPDKAADRYRKFWKVKVALCGEDKAVLPIKVEDAREGLDLEFCQIVPGSKDREGRHVVVVNTGQADKSLDRTVRVLAVWYVLMAALEDVETQRKGFCFVVNLKTSRISQVDQKFNKMVLDSIQGTLPVRVGSMNMCYAPSFFRVIWMVISTFLHERVRQRFRFFYGTDEAVLEALESTVAPENLPPPMGQKPLDFQGWLAERIKAEV 238
            M+ +L  NPAWS AP  TD+FLLMFLR+EVF P  AA+RYRKFWK K+ LCGE+KA LPIK EDAR  L+ EF Q+VPG++D EGR VV++ +   DK+L+R +R+L+VWYVL+AALEDVETQR+GFCFV   K  + SQ D  F KMV+ S+QG LPVR+GS+N+CY P+FFRV+W +I+ FLHERV++R R   GTD  VL  L + V P+ LPPPMG KP +F  WLAE+ + + 
Sbjct:    1 MKADLAANPAWSGAPSQTDEFLLMFLRAEVFSPSAAANRYRKFWKAKITLCGEEKAALPIKFEDARAALESEFVQLVPGTRDIEGRQVVMIVSSNMDKTLERRLRLLSVWYVLLAALEDVETQRRGFCFVGYQKAVKRSQADPTFVKMVMQSLQGALPVRIGSINICYPPTFFRVVWGIINPFLHERVKRRVRVIPGTDAEVLGVLGAIVPPDGLPPPMGPKPKEFSAWLAEQAQKDA 238          
BLAST of mRNA_L-elsbetiae_contig7196.16032.1 vs. uniprot
Match: A0A7S3L2B2_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2B2_9STRA)

HSP 1 Score: 145 bits (367), Expect = 4.950e-39
Identity = 80/223 (35.87%), Postives = 130/223 (58.30%), Query Frame = 0
Query:   18 TDDFLLMFLRSEVFRPDKAADRYRKFWKVKVALCGEDKAVLPIKVEDARE----GLDLEFCQIVPGSKDREGRHVVVVNTGQADKS-LDRTVRVLAVWYVLMAALEDVETQRKGFCFVVNLKTSRISQVDQKFNKMVLDSIQGTLPVRVGSMNMCYAPSFFRVIWMVISTFLHERVRQRFRFFYGTDEAVLEALEST-VAPENLPPPMGQKPL-DFQGWLAER 233
            TD F L+FLRSEVF  D AA RY K+W  +V + G +KA LP+ ++ A +     L + +   + G  D +GR ++ +  G+ DK+   R   V A+WY+L AA+E+ ETQ+ G  FV       +SQ+D+   K++L SIQGT+PVR+ + + C  P+F +++   +  F+ ER + R  F +G+ E V   L+S  +  E++P  +G   + D + W+ +R
Sbjct:   61 TDSFKLIFLRSEVFNADLAAKRYAKYWDKRVEIFGPEKAFLPLTLDGALKDDDAALTIGYANFLHGHCDPQGRSIMYMEAGRQDKTKYSRESMVRAIWYMLHAAMENEETQKYGMLFVTYPGGVTMSQIDRGLIKILLPSIQGTIPVRLSAFHSCQPPTFLKLVLPFVKLFMSERTKDRLLFHFGSTEKVCRKLQSYGLRKEDIPQTLGGNVVVDTKAWIEQR 283          
BLAST of mRNA_L-elsbetiae_contig7196.16032.1 vs. uniprot
Match: A0A7S3P5Y9_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5Y9_9STRA)

HSP 1 Score: 144 bits (363), Expect = 2.050e-38
Identity = 82/228 (35.96%), Postives = 128/228 (56.14%), Query Frame = 0
Query:   18 TDDFLLMFLRSEVFRPDKAADRYRKFWKVKVALCGEDKAVLPIKVE----DAREGLDLEFCQIVPGSKDREGRHVVVVNTGQADKS-LDRTVRVLAVWYVLMAALEDV-ETQRKGFCFVVNLKTSRISQVDQKFNKMVLDSIQGTLPVRVGSMNMCYAPSFFRVIWMVISTFLHERVRQRFRFFYGTDEAVLEALEST--VAPENLPPPMG-QKPLDFQGWLAERIKA 236
            T++F LMFLRSEVF  D AA RY  +W  +V +CG +KA LP+ ++    D    L + F   + G  D  GR ++ V  G  DK+   R     AVWYV+ AALE++ E Q+ G  F+ +   ++++Q D+   K+VL +IQGTLPVR+ + ++C  P+FF++I  +   F+ ER ++R    +G+   + E L  T  +   N+P  +G    +D   W+  R  A
Sbjct:   61 TNEFKLMFLRSEVFNADLAAKRYAHYWDKRVEICGPEKAFLPLTLDGALRDDEVALKIGFVNYLAGCSDPHGRAILYVLPGNQDKTKYTRESMGRAVWYVIHAALEEMPEAQKHGIIFMAHPAGAKLAQFDRAMMKVVLSAIQGTLPVRLSAFHICQPPAFFKIILPIAKLFMSERTKKRLCIHFGSTAKICEKLTKTYGLTKANIPQTLGGDAKVDTPAWIETRRAA 288          
BLAST of mRNA_L-elsbetiae_contig7196.16032.1 vs. uniprot
Match: A0A6V2CPB1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2CPB1_9STRA)

HSP 1 Score: 115 bits (289), Expect = 5.590e-27
Identity = 74/222 (33.33%), Postives = 119/222 (53.60%), Query Frame = 0
Query:   23 LMFLRSEVFRPDKAADRYRKFWKVKVALCGEDKAVLPI-----KVEDAREGLDLEFCQIVPGSKDREGRHVVVVNTGQADKS-LDRTVRVLAVWYVLMAALEDVETQRKGFCFVVNLKTS-RISQVDQKFNKMVLDSIQGTLPVRVGSMNMCYAPSFFRVIWMVISTFLHERVRQRFRFFYGTDEAVLEALEST-VAPENLPPPMGQK-PLDFQGWLAERIK 235
            LMFLRSE+F    AA+RY K+W  ++ L GE+KA  PI      ++D    L++ F +++ G  D  GR ++ ++    D +   R   V AVWY++ AALE    Q+KG  F+V +  +  +S  D+    MV +SI   +P+R G++++   P  F V+  +I   L  R+R   +   G+++ +L+ L    V  + LP  +G K   D   WLA+R K
Sbjct:  131 LMFLRSELFDVQPAAERYAKYWNKRIELFGEEKACKPILSLNDALQDDESALNVGFIKLLDGVTDDRGRALMWIDPANLDSTKYSRESMVRAVWYIMHAALESETAQQKGLVFLVYIGNNPALSVFDRPLISMVAESISYLIPLRAGAIHLFPTPLVFSVLLNIIKYVLGSRLRNTLKVTGGSNDKILDTLNKLGVTTDVLPIEVGGKVDHDHDAWLAKRRK 352          
BLAST of mRNA_L-elsbetiae_contig7196.16032.1 vs. uniprot
Match: A0A7S2GSM7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GSM7_9STRA)

HSP 1 Score: 101 bits (251), Expect = 8.160e-22
Identity = 68/217 (31.34%), Postives = 120/217 (55.30%), Query Frame = 0
Query:   24 MFLRSEVFRPDKAADRYRKFWKVKVALCGEDKAVLPIKVEDA-RE---GLDLEFCQIVPGSKDREGRHVVVVNTGQADKSLDRTVRVL-AVWYVLMAALEDVETQRKGFCFVVNLKTSRISQVDQKFNKMVLDSIQGTLPVRVGSMNMCYAPSFFRVIWMVISTFLHERVRQRFRFFYGTDEAVLEAL-ESTVAPENLPPPMGQKP-LDFQGWLAER 233
            +FLR E F  ++AA R   +W+ K+   G +K+ +P+ +++A RE    L+    +++P + D  GR ++  +    D ++     ++ A+WY+L+AA+ED  TQ +G  FV+ LK S + Q D+K    +L+     +P+R  S ++C+  + F +   ++   L +R+R R     GT+E VL  L E  + P+ +P  MG K  LD + WL+ R
Sbjct:   92 LFLRREAFDAERAARRLVDYWQQKLKWFGPEKSFIPLALDNAMREDTAALNRGLLRLLPVT-DSFGRCILFCDISLHDATMYSMESMMRAIWYMLLAAIEDETTQNRGAIFVLYLKQSTLDQFDRKLLHRLLELEDKFVPIRFRSFHICHPGACFDIERPILQFLLGKRLRARMDVHQGTEEEVLIELDEYGMPPDRVPSIMGGKVVLDHERWLSNR 307          
BLAST of mRNA_L-elsbetiae_contig7196.16032.1 vs. uniprot
Match: A0A1E7FHR2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHR2_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 3.480e-13
Identity = 63/218 (28.90%), Postives = 105/218 (48.17%), Query Frame = 0
Query:   19 DDFLLMFLRSEVFRPDKAADRYRKFWKVKVALCGEDKAVLPIKVEDAREG----LDLEFCQIVPGSKDREGRHV-VVVNTGQADKSLDRTVRVLAVWYVLMAALEDVETQRKGFCFV-VNLKTSRISQVDQKFNKMVLDSIQGTLPVRVGSMNMCYAPSFFRVIWMVISTFLHERVRQRFRFFYGTDEAVLEALESTVAPENLPPPMGQKPLDFQGWL 230
            + FL+MFLR+  F    AA R+  F++ K+ L G +K    I+V+D  E     L+  + Q++   +DR GR + +++   +  K+L   +R   ++ V+M AL+DVETQ++G   +  N+  S        +   +L S+   LP+R   ++ CY     R ++ V      +  R R RF  GTD  V+  L +   P          P+ F G L
Sbjct:   31 EKFLIMFLRAVEFNTKTAAIRFVAFFETKLELFGREKLGRDIRVDDLDEDDINCLESGYAQVL-NKRDRAGRAIFMLMPMIRRYKTLQNRMRT--IYMVIMFALKDVETQKRGIVAIPYNVGPSHTKDRQAVWKNALLVSV---LPIRFTGVHYCYDDEKLRAVFFVAMVVFEKAARIRSRFHLGTDMEVIYTLMTFGIPNEA------LPVSFSGSL 236          
BLAST of mRNA_L-elsbetiae_contig7196.16032.1 vs. uniprot
Match: A0A7S4ADD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ADD2_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.300e-12
Identity = 67/204 (32.84%), Postives = 106/204 (51.96%), Query Frame = 0
Query:   21 FLLMFLRSEVFRPDKAADRYRKFWKVKVALCGEDKAVLPIKVEDAREG----LDLEFCQIVPGSKDREGRHV-VVVNTGQADKSLDRTVRVLAVWYVLMAALEDVETQRKGFCFVVNLKTSRISQVDQKFNKMVLDSIQ--GTLPVRVGSMNMCYAPSFFRVIWMVISTFLHERVRQRFRFFYGTDEAVLEALESTVAP-ENLP 216
            F LMFLR+  F    AA R+  F++ K+ L G++K    I+V+D  E     L+  + QI+ G +DR  R + +++   +  K+L+  +R  A++ VLM AL+DVETQ++G   +       I Q   K  + V  + Q    LP+R  +++ CY     R I+ +    L +  R R RF  GTD  V+  L +   P E+LP
Sbjct:   91 FQLMFLRALEFDVKAAAARFISFFQEKLKLFGKEKLGRDIRVDDLDEDDIACLESGYAQIL-GVRDRADRAIFMLMPMIRQFKTLENKMR--AIYMVLMFALKDVETQKRGIVAI----PYNIGQGRSKDRQAVFKNAQLLAALPLRFTAVHYCYDDEKLRHIFFLAMYALQKAARIRTRFHLGTDMEVIYTLMTFGLPSESLP 287          
BLAST of mRNA_L-elsbetiae_contig7196.16032.1 vs. uniprot
Match: A0A7S4QUR0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QUR0_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.610e-6
Identity = 29/82 (35.37%), Postives = 47/82 (57.32%), Query Frame = 0
Query:   23 LMFLRSEVFRPDKAADRYRKFWKVKVALCGEDKAVLPI-----KVEDAREGLDLEFCQIVPGSKDREGRHVVVVNTGQADKS 99
            LMFLRSE+F    AA+RY K+W  ++ L GE+KA  PI      ++D    L++ F +++ G  D  GR ++ ++    D +
Sbjct:  175 LMFLRSELFDVQPAAERYAKYWNKRIELFGEEKACKPILSLNDALQDDESALNVGFIKLLDGVTDDRGRALMWIDPANLDST 256          
BLAST of mRNA_L-elsbetiae_contig7196.16032.1 vs. uniprot
Match: A0A7S4EQS5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQS5_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.440e-5
Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 0
Query:   18 TDDFLLMFLRSEVFRPDKAADRYRKFWKVKVALCGEDKAVLPIKVED-AREGLDLEFC---QIVPGSKDREGRHVVVVNTGQADKSLDRTVRVLAVWYVLMAALEDVETQRKGFCFVV--NLKTSRISQVDQ-KFNK-MVLDSIQGTLPVRVGSMNMC 167
            ++ F L F+RS +F   KAA R   F  + V L G+      +++ D +RE + L      Q++P  +DR GR + V   G   KS     RV  + Y ++AA +DVETQRKG   +V    K      V   KF++ M L  +   LP+R  S++ C
Sbjct:  117 SNGFRLRFIRSSLFDVRKAAMRMVTFLDLLVELFGDFALRRELQMSDFSREEMQLFRAGRMQLLP-YRDRSGRRIFVCVGGFGLKS-SLVSRVKILIYTMLAASDDVETQRKGITSIVWPGKKVPDGDTVQNVKFDRVMFLKRVYENLPIRTCSLHFC 272          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7196.16032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FMA7_ECTSI2.930e-14786.97CRAL-TRIO domain-containing protein n=2 Tax=Ectoca... [more]
D7FMA8_ECTSI8.670e-10059.24CRAL-TRIO domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S3L2B2_9STRA4.950e-3935.87Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A7S3P5Y9_9STRA2.050e-3835.96Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A6V2CPB1_9STRA5.590e-2733.33Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2GSM7_9STRA8.160e-2231.34Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1E7FHR2_9STRA3.480e-1328.90Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S4ADD2_9STRA2.300e-1232.84Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S4QUR0_9STRA4.610e-635.37Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4EQS5_9STRA1.440e-533.54Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 69..224
e-value: 3.4E-8
score: 43.2
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 73..219
e-value: 5.6E-20
score: 71.7
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 79..227
score: 12.45
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 58..228
e-value: 5.0E-26
score: 93.0
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 74..221
NoneNo IPR availablePANTHERPTHR10174:SF208CRAL-TRIO DOMAIN-CONTAINING PROTEIN DDB_G0278031coord: 18..213
NoneNo IPR availablePANTHERPTHR10174RETINALDEHYDE BINDING PROTEIN-RELATEDcoord: 18..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7196contigL-elsbetiae_contig7196:1801..6686 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7196.16032.1mRNA_L-elsbetiae_contig7196.16032.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7196 1759..8500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7196.16032.1 ID=prot_L-elsbetiae_contig7196.16032.1|Name=mRNA_L-elsbetiae_contig7196.16032.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
MRTNLKQNPAWSRAPPPTDDFLLMFLRSEVFRPDKAADRYRKFWKVKVAL
CGEDKAVLPIKVEDAREGLDLEFCQIVPGSKDREGRHVVVVNTGQADKSL
DRTVRVLAVWYVLMAALEDVETQRKGFCFVVNLKTSRISQVDQKFNKMVL
DSIQGTLPVRVGSMNMCYAPSFFRVIWMVISTFLHERVRQRFRFFYGTDE
AVLEALESTVAPENLPPPMGQKPLDFQGWLAERIKAEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR036865CRAL-TRIO_dom_sf