prot_L-elsbetiae_contig7191.16028.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7191.16028.1
Unique Nameprot_L-elsbetiae_contig7191.16028.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length258
Homology
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BLAST of mRNA_L-elsbetiae_contig7191.16028.1 vs. uniprot
Match: D8LSJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ7_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 2.790e-101
Identity = 184/271 (67.90%), Postives = 207/271 (76.38%), Query Frame = 0 
Query:    1 MMHYENFLPWV--AILVGAVTAGLATWWWRGM---RKSGGVVGRQGARKSLAHTPGVRVVCVQDSSTGSSDGGWESSXXXXRSKGGE----ASKWEQSKQKGSLGYYFAHHITMKELAPEDYQMNGPRLLSKGDPAASNSGSAPNGSXXXXXXXXXX----PQQISSYSWEDYGEEVRLTFRQSEWEWATVEAEEIRVEWGPRRFRMSIDSREYGLHAIDLQRLSGDVAGVRVRKLKSRLVVALVKA-KRGTYSRTSPWTKLQADPEKPSD 257
            M+  E+F   V   I + A  A L  WW+RGM   R SGG  G  G++K LAHTPG+R VC+QDS T  S+GG    XXXX  +G      +SKWEQSKQKG LGYYFAHHITMKELAPEDYQMNGP+LLSKGD  ++ +G+ PNGSXXXXXXXXXX    PQQISSYSWEDYGEEVRLTFRQSEWEWA V+ EEI +EWG RRFRMSIDSREYGLH IDLQRLSG VAGV  RKLK+RLVVALVK  +RG+YS +  W+KLQA  EKPSD
Sbjct:    1 MLLLEHFQREVLACIALAAALAALLLWWFRGMSEGRSSGGA-GTSGSKKPLAHTPGIRAVCMQDSFTEGSNGGGXXXXXXXTGQGDRRAAASSKWEQSKQKGDLGYYFAHHITMKELAPEDYQMNGPKLLSKGDTTSAPNGARPNGSXXXXXXXXXXXXXXPQQISSYSWEDYGEEVRLTFRQSEWEWAKVDVEEIEIEWGSRRFRMSIDSREYGLHTIDLQRLSGVVAGVTARKLKTRLVVALVKGGRRGSYSHSPAWSKLQAALEKPSD 270
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BLAST of mRNA_L-elsbetiae_contig7191.16028.1 vs. uniprot
Match: A0A6H5L1W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1W9_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 1.760e-36
Identity = 80/129 (62.02%), Postives = 87/129 (67.44%), Query Frame = 0 
Query:    3 HYEN-FLPWVAILVGAVTAGLATWWWRGM---RKSGGVVGRQGARKSLAHTPGVRVVCVQDSST-GSSDGGWESSXXXXRSKGGEA---SKWEQSKQKGSLGYYFAHHITMKELAPEDYQMNGPRLLSK 123
            HY+   L  +A+  G   A L  WW  GM   R SGGV G  G++K LAHTPG+R VCVQDS T GS  GGW SS        G A   SKWEQSKQKG LGYYFAHHITMKELAPEDYQMNGP+LLSK
Sbjct:    6 HYQREVLACIALAAGL--AALLLWWSPGMSEGRSSGGV-GTSGSKKPLAHTPGIRAVCVQDSFTQGSHGGGWGSSASSTGQGDGPAAASSKWEQSKQKGDLGYYFAHHITMKELAPEDYQMNGPKLLSK 131
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7191.16028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSJ7_ECTSI2.790e-10167.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1W9_9PHAE1.760e-3662.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 149..255
e-value: 6.4E-7
score: 31.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..257
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..27
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7191contigL-elsbetiae_contig7191:1284..4182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7191.16028.1mRNA_L-elsbetiae_contig7191.16028.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7191 799..4268 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7191.16028.1 ID=prot_L-elsbetiae_contig7191.16028.1|Name=mRNA_L-elsbetiae_contig7191.16028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=258bp
MMHYENFLPWVAILVGAVTAGLATWWWRGMRKSGGVVGRQGARKSLAHTP
GVRVVCVQDSSTGSSDGGWESSGGGGRSKGGEASKWEQSKQKGSLGYYFA
HHITMKELAPEDYQMNGPRLLSKGDPAASNSGSAPNGSPPPTTTKRRRPQ
QISSYSWEDYGEEVRLTFRQSEWEWATVEAEEIRVEWGPRRFRMSIDSRE
YGLHAIDLQRLSGDVAGVRVRKLKSRLVVALVKAKRGTYSRTSPWTKLQA
DPEKPSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone