prot_L-elsbetiae_contig7182.16021.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7182.16021.1
Unique Nameprot_L-elsbetiae_contig7182.16021.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length136
Homology
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BLAST of mRNA_L-elsbetiae_contig7182.16021.1 vs. uniprot
Match: D8LQC5_ECTSI (Similar to oral cancer overexpressed 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC5_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 1.310e-79
Identity = 125/135 (92.59%), Postives = 127/135 (94.07%), Query Frame = 0 
Query:    1 MFDDIVLLDDRMVAEGKDAGREDGKARGVKEGEGMGRGKGFQAAAEMGFCRGCCLAWLSMHAQDPGTFPFSEKALASMRAVVTLAESVPRVNTQGAAAAQTAQRVRARFRAVTSMVGLPVVFDSKGLAEAKDYSF 135
            MFDDIVLLDDRMVAEGKDAGREDG+ARG KEGEGMGRGKGFQ AAEM FCRGCCLAWLSMHAQDP  FPFSEKALASMRAVVTLAESVPRVNTQ A AAQTAQRVRARFRAVTSMVGLPVVFDSKG AEAKD+SF
Sbjct:    2 MFDDIVLLDDRMVAEGKDAGREDGRARGFKEGEGMGRGKGFQTAAEMSFCRGCCLAWLSMHAQDPDKFPFSEKALASMRAVVTLAESVPRVNTQEATAAQTAQRVRARFRAVTSMVGLPVVFDSKGQAEAKDFSF 136
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BLAST of mRNA_L-elsbetiae_contig7182.16021.1 vs. uniprot
Match: A0A835ZD80_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD80_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.820e-15
Identity = 47/115 (40.87%), Postives = 64/115 (55.65%), Query Frame = 0 
Query:   29 VKEGEGMGRGKGFQAAAEMGFCRGCCLAWLSM--------HAQDPGTFPFSEKALASMRAVVTLAESVPRVNTQGAAAAQTAQRVRARFRAVTSMVGLPVVFDSKGLAEAKDYSF 135
            + EG  MGR KG + AAEMGF RGCC+AWL++         A  P     S+K +ASM+AV  +A +VPR NT            RA+F+ VT+++   V FD    A A+D +F
Sbjct:    1 MTEGRAMGRQKGHELAAEMGFYRGCCMAWLALLRDNDGVTSALRPELTKASDKLMASMQAVADMAMAVPRENTMDEDLVARVASCRAKFKTVTALLRADVKFDRAADATARDMTF 115
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7182.16021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQC5_ECTSI1.310e-7992.59Similar to oral cancer overexpressed 1 n=2 Tax=Ect... [more]
A0A835ZD80_9STRA1.820e-1540.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR28532FAMILY NOT NAMEDcoord: 2..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7182contigL-elsbetiae_contig7182:5454..6753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7182.16021.1mRNA_L-elsbetiae_contig7182.16021.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7182 5409..7552 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7182.16021.1 ID=prot_L-elsbetiae_contig7182.16021.1|Name=mRNA_L-elsbetiae_contig7182.16021.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp
MFDDIVLLDDRMVAEGKDAGREDGKARGVKEGEGMGRGKGFQAAAEMGFC
RGCCLAWLSMHAQDPGTFPFSEKALASMRAVVTLAESVPRVNTQGAAAAQ
TAQRVRARFRAVTSMVGLPVVFDSKGLAEAKDYSF*
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