prot_L-elsbetiae_contig7164.15995.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7164.15995.1
Unique Nameprot_L-elsbetiae_contig7164.15995.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length423
Homology
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BLAST of mRNA_L-elsbetiae_contig7164.15995.1 vs. uniprot
Match: D7FTY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTY2_ECTSI)

HSP 1 Score: 523 bits (1348), Expect = 2.210e-182
Identity = 282/409 (68.95%), Postives = 332/409 (81.17%), Query Frame = 0 
Query:   12 PRAARACLLSSGRTRTFEVGQGGRLVVDMARVAAVVHVTTKWVDSCDVTISRLPAGADVSNLEGLGANA--ETTDATGLTLLADEALAQVTLSHDEERKERAGEDGEEVYLVEALVPELFSVDVLLAHGNVSVAKKLKGDCQVQLGSGDISVGTVRGETIRLSTGCGRVEVDELEGNVHVTATADVYARLINGAKVRIDAMGDGDPSVTIGALYSSGAYITSAGNVGVSSCHGRIAVHTAGASGGVNLSSVNGTAQVSTGQGGATVHMDVLEEGTACNIRSDGGDVNVSMSQQVDADLDIEANSVELPSTFKGDVLSGKAVGSIKSAAVEPSRAARYGSASSNSKDAGGGKIDLVGARGQSLRQYFPTDAATNSVRPKLSVMATGGSVVVEILSWADNIARKFTAREAA 418
            P A  AC  SSG  +T  +GQGGRLV+DMA+ AAV+ VTT+W+DSC V +SRLPAG+D  +L G GA       DA GL+L ADEA AQVTL+HD+E         E+ YL+EA+VPELFSV++L +HGNVSV+KK+KGDC+V+L  GDI+VG VRGETIRLSTG G ++VDELEGNV +TAT++V ARLINGAKV+I+  G  DPSV +GALYSSGA+ITSAGNVGVSSCHGRIAVHTA  SG VNLSSV+GTA VS G+GGATVH+DVLEEGTA +IRS+GGD+NVS+SQQVDAD++I  + V++PSTFKGD   G+AVGSI SA VEPSRA R+GS SS   DAGGGKID+VGARGQSLRQYFP + AT SVRPKLSV+A GG VVVE LSWADNI RKF AREAA
Sbjct:   29 PGALHACFTSSGHAQTIPIGQGGRLVIDMAKAAAVIKVTTQWIDSCSVEVSRLPAGSDGRSLAGAGAKEVLSNLDAAGLSLHADEAHAQVTLAHDKEHP-----SVEDTYLIEAVVPELFSVELLASHGNVSVSKKIKGDCKVRLDRGDINVGIVRGETIRLSTGRGHIKVDELEGNVDITATSNVRARLINGAKVKINTTGHDDPSVNVGALYSSGAHITSAGNVGVSSCHGRIAVHTADTSGSVNLSSVSGTAHVSAGEGGATVHLDVLEEGTASHIRSNGGDINVSLSQQVDADVEITGDVVKVPSTFKGDTQRGRAVGSIYSAQVEPSRATRHGSTSST--DAGGGKIDMVGARGQSLRQYFPGNTATTSVRPKLSVVAEGGCVVVETLSWADNITRKFAAREAA 430
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7164.15995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTY2_ECTSI2.210e-18268.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34094FAMILY NOT NAMEDcoord: 20..410
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..422
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7164contigL-elsbetiae_contig7164:3828..6721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7164.15995.1mRNA_L-elsbetiae_contig7164.15995.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7164 2776..7258 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7164.15995.1 ID=prot_L-elsbetiae_contig7164.15995.1|Name=mRNA_L-elsbetiae_contig7164.15995.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=423bp
MLRTRSMMPLLPRAARACLLSSGRTRTFEVGQGGRLVVDMARVAAVVHVT
TKWVDSCDVTISRLPAGADVSNLEGLGANAETTDATGLTLLADEALAQVT
LSHDEERKERAGEDGEEVYLVEALVPELFSVDVLLAHGNVSVAKKLKGDC
QVQLGSGDISVGTVRGETIRLSTGCGRVEVDELEGNVHVTATADVYARLI
NGAKVRIDAMGDGDPSVTIGALYSSGAYITSAGNVGVSSCHGRIAVHTAG
ASGGVNLSSVNGTAQVSTGQGGATVHMDVLEEGTACNIRSDGGDVNVSMS
QQVDADLDIEANSVELPSTFKGDVLSGKAVGSIKSAAVEPSRAARYGSAS
SNSKDAGGGKIDLVGARGQSLRQYFPTDAATNSVRPKLSVMATGGSVVVE
ILSWADNIARKFTAREAAKSGP*
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