prot_L-elsbetiae_contig7160.15991.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7160.15991.1
Unique Nameprot_L-elsbetiae_contig7160.15991.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length384
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7160.15991.1 vs. uniprot
Match: A0A6H5KM27_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM27_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 3.440e-126
Identity = 266/386 (68.91%), Postives = 286/386 (74.09%), Query Frame = 0 
Query:    1 MVPAVMEACPELFCPEQRGPAVVTTXXXXXXXTEVHTRAILHLKSA--------TLQLLDRGFVRRAMGAVVAAPGAAADVLRALLGCPVGVLLSEGEEALRAVLPKVAGSDFPRRSSVASLCCKVWTRLYAEHPAGGRQAMETWTLNALLQADSEAPLPRAVAYETMCREPVLVFRCRGEALSCPYLLEILLRVLRSLLLASDRTIDQAVTAKNSRWEMVSASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEDTEEGSATVNGQMMSLVQQAIVARCLLVVALEGADGVSRGGAKDKGGGEQEEGEESDGAAAALGEGLATRAQCSKLVCGFLQTLFSECPPLLHLLLRQTLPDAAFALLLDGVSARR 378
            M+PAVM+ CPELFCPEQRG     +         V   A++   S         T   LD+ FVRRA GAVVAAPG A DVLRALL CPV  LLS  E+ L+ VLPK+AG DFPRRSSVASLCC VW RLY  HP G  QAMETWTLNALLQ D+EAPLPRAV YE MCREPVLVFRCRGEALSCPYLL ILLRVLRSLLLAS+RTIDQAV AKN R E          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WED EEG+A+V+G+MMSLVQQAIVARCLLVVAL GA G+S GG+           EE +G     G+G+ATRAQC KLVC FLQTL SECPPLLHLLLRQTLP  A  LLLDGV A R
Sbjct:    1 MLPAVMDVCPELFCPEQRG----DSCDGNDYGDVVDATAVVEPPSGKFASGQEITPHPLDKAFVRRATGAVVAAPGGAVDVLRALLACPVPALLSTAEDVLKGVLPKIAGPDFPRRSSVASLCCDVWMRLYDAHPHG--QAMETWTLNALLQTDAEAPLPRAVTYEIMCREPVLVFRCRGEALSCPYLLRILLRVLRSLLLASERTIDQAVVAKNVR-EKGGEGNDKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWEDVEEGTASVDGRMMSLVQQAIVARCLLVVALGGA-GLSAGGSAK---------EEREGGVVVFGDGIATRAQCRKLVCEFLQTLISECPPLLHLLLRQTLPTEALKLLLDGVPASR 369
[Close]
BLAST of mRNA_L-elsbetiae_contig7160.15991.1 vs. uniprot
Match: D7FZF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF5_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 6.660e-79
Identity = 217/386 (56.22%), Postives = 234/386 (60.62%), Query Frame = 0 
Query:    1 MVPAVMEACPELFCPEQRGPAVVTTXXXXXXX----TEVHTRAILHLKSATLQLLDRGFVRRAMGAVVAAPGAAADVLRALLGCPVGVLLSEGEEALRAVLPKVAGSDFPRRSSVASLCCKVWTRLYAEHPAGGRQAMETWTLNALLQADSEAPLPRAVAYETMCREPVLVFRCRGEALSCPYLLEILLRVLRSLLLASDRTIDQAVTAKNSRWEMVSASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----WEDTEEGSATVNGQMMSLVQQAIVARCLLVVALEGADGVSRGGAKDKGGGEQEEGEESDGAAAALGEGLATRAQCSKLVCGFLQTLFSECPPLLHLLLRQTLPDAAFALLLDGVSARR 378
            M+PAVM+ CPELFCPEQRG +                E  + + +  +  T   LD+ FVRRA GAVVAAPG A DVLRALL CPV  LLS  E+ L+ VLPKVAG DFPRRSSVASLCC VW RLY  HP G  QAMETWTLNALLQ D+EAPLPRAV YETMCREPVLVFRCRGEA                            V AKNSRWEMV ASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    WED EEG+ATV+G+MMSLVQQAIVARC                               +G     G+G+ATRAQ                          TLP  AF LLLDGV A R
Sbjct:   37 MLPAVMDVCPELFCPEQRGNSCDDNHYGDAVDGTAVVEAPSGSFVSGQEITPHPLDKAFVRRATGAVVAAPGGAVDVLRALLACPVPALLSTAEDVLKGVLPKVAGPDFPRRSSVASLCCNVWMRLYDAHPHG--QAMETWTLNALLQTDAEAPLPRAVTYETMCREPVLVFRCRGEA----------------------------VLAKNSRWEMVCASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWEDVEEGTATVDGRMMSLVQQAIVARCXXXXXXXXXXXXXXXXXXXX----------XEGGVVVFGDGIATRAQ--------------------------TLPTEAFKLLLDGVPASR 356
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7160.15991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KM27_9PHAE3.440e-12668.91Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FZF5_ECTSI6.660e-7956.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029321Integrator complex subunit 2PFAMPF14750INTS2coord: 53..236
e-value: 1.1E-12
score: 46.4
IPR029321Integrator complex subunit 2PANTHERPTHR28608FAMILY NOT NAMEDcoord: 5..374
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 249..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7160contigL-elsbetiae_contig7160:3660..9002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7160.15991.1mRNA_L-elsbetiae_contig7160.15991.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7160 3639..9002 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7160.15991.1 ID=prot_L-elsbetiae_contig7160.15991.1|Name=mRNA_L-elsbetiae_contig7160.15991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=384bp
MVPAVMEACPELFCPEQRGPAVVTTTITTTTTTEVHTRAILHLKSATLQL
LDRGFVRRAMGAVVAAPGAAADVLRALLGCPVGVLLSEGEEALRAVLPKV
AGSDFPRRSSVASLCCKVWTRLYAEHPAGGRQAMETWTLNALLQADSEAP
LPRAVAYETMCREPVLVFRCRGEALSCPYLLEILLRVLRSLLLASDRTID
QAVTAKNSRWEMVSASARRRNDKAAAEAAVAAAAAAAAAAASAAASGGPP
PPPPPPPPPAWEDTEEGSATVNGQMMSLVQQAIVARCLLVVALEGADGVS
RGGAKDKGGGEQEEGEESDGAAAALGEGLATRAQCSKLVCGFLQTLFSEC
PPLLHLLLRQTLPDAAFALLLDGVSARRRILAL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029321INTS2