prot_L-elsbetiae_contig7139.15955.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7139.15955.1
Unique Nameprot_L-elsbetiae_contig7139.15955.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length119
Homology
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BLAST of mRNA_L-elsbetiae_contig7139.15955.1 vs. uniprot
Match: A0A6H5JF13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF13_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 5.420e-5
Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = 0 
Query:    1 VIVLNAVDAIRALEVRLHTDD-GRFSPPSRP--------RVSATGE-LSPVPLRAKFTLRPP 52
            VIVLNAVDAIR +EVRLHT+  G+ SPPS          RV   G  LSP+P    FT+RPP
Sbjct:  195 VIVLNAVDAIRVVEVRLHTEGAGQASPPSPSPGGGKCPARVPVGGRRLSPLPFDTTFTIRPP 256
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7139.15955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JF13_9PHAE5.420e-554.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7139contigL-elsbetiae_contig7139:6632..7921 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7139.15955.1mRNA_L-elsbetiae_contig7139.15955.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7139 6632..7921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7139.15955.1 ID=prot_L-elsbetiae_contig7139.15955.1|Name=mRNA_L-elsbetiae_contig7139.15955.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
VIVLNAVDAIRALEVRLHTDDGRFSPPSRPRVSATGELSPVPLRAKFTLR
PPSAPAQPGSSSGGGGGFGGGGDKGGSGSSSSCCEGGGCGGSGAWDSAGD
RGGREARDDGGGSIGDGSN
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