prot_L-elsbetiae_contig7132.15945.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7132.15945.1
Unique Nameprot_L-elsbetiae_contig7132.15945.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length134
Homology
BLAST of mRNA_L-elsbetiae_contig7132.15945.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.430e-19
Identity = 68/163 (41.72%), Postives = 82/163 (50.31%), Query Frame = 0
Query:    1 IGPVALFGLLGITFLVGCKK----RTLQMDMARPRRWNMISVGPATTKDRIDVSSSGRSRVTTGTSETSN-TASPRPTTR------------------------RFSLRQIFNTMPEDAFDVEQHRLWELFARHTTMTLIILYLVYSQVSTVVFQAFACDDFP 134
            IGPV L  LLG TF +G +     R + M   R      +S   A T    D   SG  R   G S+++  TAS                              R S R+++   P D  D+EQ+ LWELFARHTTM LIILYLVY+QVSTVVFQAFAC+DFP
Sbjct: 1023 IGPVGLLLLLGFTFYLGARPVRTGRVIDMSF-RNNTSTSVSSATAATLAAYDSGISGSVRPRAGASDSARGTASTTAXXXXXXXXXXXXXXXXXXXXXXXQGRARPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFP 1184          
BLAST of mRNA_L-elsbetiae_contig7132.15945.1 vs. uniprot
Match: A0A6H5JI42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI42_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 3.040e-18
Identity = 43/59 (72.88%), Postives = 50/59 (84.75%), Query Frame = 0
Query:   76 RFSLRQIFNTMPEDAFDVEQHRLWELFARHTTMTLIILYLVYSQVSTVVFQAFACDDFP 134
            R S R+++ + P D  D+EQ+ LWELFARHTTM LIILYLVYSQVSTVVFQAFAC+DFP
Sbjct:  326 RPSARRVWRSGPGDESDIEQNHLWELFARHTTMMLIILYLVYSQVSTVVFQAFACEDFP 384          
BLAST of mRNA_L-elsbetiae_contig7132.15945.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 4.430e-18
Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 0
Query:   76 RFSLRQIFNTMPEDAFDVEQHRLWELFARHTTMTLIILYLVYSQVSTVVFQAFACDDFP 134
            R S R+++   P D  D+EQ+ LWELFARHTTM LIILYLVYSQVSTVVFQAFAC+DFP
Sbjct: 1592 RPSARRVWRNGPGDESDIEQNHLWELFARHTTMMLIILYLVYSQVSTVVFQAFACEDFP 1650          
BLAST of mRNA_L-elsbetiae_contig7132.15945.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 2.080e-17
Identity = 42/59 (71.19%), Postives = 49/59 (83.05%), Query Frame = 0
Query:   76 RFSLRQIFNTMPEDAFDVEQHRLWELFARHTTMTLIILYLVYSQVSTVVFQAFACDDFP 134
            R S R+++   P D  D+EQ+ LWELFARHTTM LIILYLVY+QVSTVVFQAFAC+DFP
Sbjct: 1393 RPSARRVWRNGPGDESDLEQNHLWELFARHTTMMLIILYLVYTQVSTVVFQAFACEDFP 1451          
BLAST of mRNA_L-elsbetiae_contig7132.15945.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.330e-16
Identity = 56/134 (41.79%), Postives = 72/134 (53.73%), Query Frame = 0
Query:    1 IGPVALFGLLGITFLVGCKKRTLQMDMARPRRWNMISVGPATTKDRIDVSSSGRSRVTTGTSETSNTASPRPTTRRFSLRQIFNTMPEDAFDVEQHRLWELFARHTTMTLIILYLVYSQVSTVVFQAFACDDFP 134
            IGP+     LGITF VG   R  +     P   N  + G AT+  R+     GR +  +  S  S  A    T R  S+R +         + EQ RLW LFARHTT+ LI+LYLVY+Q+STVVFQ F+C+D P
Sbjct: 1094 IGPLLPLCFLGITFFVG--SRPAKKTNMSP---NTTAGGGATSGSRVGEVEEGRVQGASSRSMASVMAIGGATARAQSVRNLLRAKSGQQKNPEQERLWGLFARHTTIMLIVLYLVYTQISTVVFQTFSCEDLP 1222          
BLAST of mRNA_L-elsbetiae_contig7132.15945.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.170e-15
Identity = 62/140 (44.29%), Postives = 73/140 (52.14%), Query Frame = 0
Query:    1 IGPVALFGLLGITFLVGCKKRTLQMDMARPRRWNMISVGPATTKDRIDVSSSGRS----RV--TTGTSETSNTASPRPTTRRFSLRQIFNTMPEDAFDVEQHRLWELFARHTTMTLIILYLVYSQVSTVVFQAFACDDFP 134
            IGP+     LGITF VG          +RP +   +S   ATT D     S GR     RV      S TS TA+     R  S+R        D  + EQ RLW LFARHTTM LI+LYLVY+Q+STVVFQ FAC+  P
Sbjct: 1327 IGPLVPLCFLGITFFVG----------SRPAKETNMSPN-ATTADGGASGSGGRELEEGRVQGACSGSTTSVTANSGAAAREPSVRSALRAKSGDRKNPEQERLWGLFARHTTMMLIVLYLVYTQISTVVFQTFACEHLP 1455          
BLAST of mRNA_L-elsbetiae_contig7132.15945.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 2.140e-8
Identity = 46/126 (36.51%), Postives = 61/126 (48.41%), Query Frame = 0
Query:    1 IGPVALFGLLGITFLVG---CKKRTLQMDMARPRRWNMISVGPATTKDRIDVSSSGRSRVTTGTSETSNTASPRPTTRRFSLRQIFNTMPEDAFDVEQHRLWELFARHTTMTLIILYLVYSQVSTV 123
            IGP+     LGITF VG    K+  +  +                 + R+  +SSG        S TS T++     R  S+R        D  + EQ RLW LFARHTT+ LI+LYLVY+Q+STV
Sbjct: 1134 IGPLVPLFFLGITFFVGSRPAKETNMSPNATAGGXXXXXXXXRELEEGRVQGASSG--------STTSVTSNRGAAARGPSVRSALRAKSGDPKNPEQQRLWGLFARHTTIMLIVLYLVYTQISTV 1251          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7132.15945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G0A8_ECTSI1.430e-1941.72Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JI42_9PHAE3.040e-1872.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRA9_9PHAE4.430e-1872.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0B0_ECTSI2.080e-1771.19Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7G119_ECTSI1.330e-1641.79Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5K4A5_9PHAE1.170e-1544.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXY9_ECTSI2.140e-836.51Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..134
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 110..129
NoneNo IPR availableTMHMMTMhelixcoord: 4..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7132contigL-elsbetiae_contig7132:2215..3799 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7132.15945.1mRNA_L-elsbetiae_contig7132.15945.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7132 2214..3799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7132.15945.1 ID=prot_L-elsbetiae_contig7132.15945.1|Name=mRNA_L-elsbetiae_contig7132.15945.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp
IGPVALFGLLGITFLVGCKKRTLQMDMARPRRWNMISVGPATTKDRIDVS
SSGRSRVTTGTSETSNTASPRPTTRRFSLRQIFNTMPEDAFDVEQHRLWE
LFARHTTMTLIILYLVYSQVSTVVFQAFACDDFP
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