prot_L-elsbetiae_contig7124.15937.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7124.15937.1
Unique Nameprot_L-elsbetiae_contig7124.15937.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length308
Homology
BLAST of mRNA_L-elsbetiae_contig7124.15937.1 vs. uniprot
Match: A0A6H5KYE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYE0_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 4.620e-34
Identity = 146/314 (46.50%), Postives = 162/314 (51.59%), Query Frame = 0
Query:   10 SPPESIVGIGGSWKGAIG--HLTGDDSDWDAASSRRSGASGRSTGTAGGSAG----------GINDDDAASQXXXXXXXXXXXXXQSGASGRPGGTAXXXXXXXXXXXXXXXXXXXXXXXAAG--GGKGGLQVPRSTSGLGGIHSQSWRRIVSSQRGDEDGQNGEAGGDRGAEGTMMRRTGRGTPGGGPLGSSARRNSQSMGGMTVNSSHPDSDR-ESFVSRVGSYALTDVGIGTSELQAGRXXXXXXXXXXXXXXXLSPTSTVMRSIQG-SELGTERDSYGGYGSDGYTNGSDSPGAQSGWERAWMRQRGDAR 307
            SPPESIVGIGGSWKGA G   + GD+   DAAS    G   R + +A   A           G+NDDD ASQ              S    +    A XXXXXXXXXXXXXXXXXX    A G  G                 H+ SWR+ +          N            MMRR  RG  GG   G S R NSQSMGGMT  S   D D  ESFVSR GSYALTD+G+G S+   GR               LSP ST+MRS+ G SE+GTERDSYG   +  YTN SDSPGA SGWERAWMRQR DAR
Sbjct:    2 SPPESIVGIGGSWKGAAGLESVVGDN---DAASQYTGG---RPSSSAAMGAXXXXXXXXXSVGVNDDDTASQWDAGSRISRVSGPSSSGPRQRSAAASXXXXXXXXXXXXXXXXXXSSVGAKGEPGSGAAAXXXXXXXXXXXXHNHSWRKDL----------NDXXXXXXXXXXXMMRRANRGPQGGAGSGPSGR-NSQSMGGMTAES---DGDGGESFVSRAGSYALTDIGVGHSD--QGRGDQAGKAGGASGAGALSPASTIMRSVHGVSEVGTERDSYGSETA--YTNASDSPGAHSGWERAWMRQRNDAR 291          
BLAST of mRNA_L-elsbetiae_contig7124.15937.1 vs. uniprot
Match: D8LN23_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN23_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 3.130e-28
Identity = 81/138 (58.70%), Postives = 89/138 (64.49%), Query Frame = 0
Query:  171 MMRRTGRGTPGGGPLGSSARRNSQSMGGMTVNSSHPDSDR-ESFVSRVGSYALTDVGIGTSELQAGRXXXXXXXXXXXXXXXLSPTSTVMRSIQG-SELGTERDSYGGYGSDGYTNGSDSPGAQSGWERAWMRQRGDA 306
            +MRR   G  GG   G S R NSQSMGGMT  S   D D  ESFVSR GSYALTD+G+G S+   GR               LSPTST+MRS+ G SE+GTERDSYG   +  YTN SDSPGA SGWERAWMRQR DA
Sbjct:  169 VMRRANLGPQGGAGSGPSGR-NSQSMGGMTAES---DGDGGESFVSRAGSYALTDIGVGHSD--QGRGNQAGKAGGDSGAGALSPTSTLMRSVHGMSEVGTERDSYGSEAA--YTNASDSPGAHSGWERAWMRQRNDA 298          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7124.15937.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYE0_9PHAE4.620e-3446.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN23_ECTSI3.130e-2858.70Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7124contigL-elsbetiae_contig7124:2909..9658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7124.15937.1mRNA_L-elsbetiae_contig7124.15937.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7124 2909..9658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7124.15937.1 ID=prot_L-elsbetiae_contig7124.15937.1|Name=mRNA_L-elsbetiae_contig7124.15937.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=308bp
MAGQNRASASPPESIVGIGGSWKGAIGHLTGDDSDWDAASSRRSGASGRS
TGTAGGSAGGINDDDAASQWDAASSRRSGASGQSGASGRPGGTAAAARAA
AGGINDDDAASYYAASPAAGGGKGGLQVPRSTSGLGGIHSQSWRRIVSSQ
RGDEDGQNGEAGGDRGAEGTMMRRTGRGTPGGGPLGSSARRNSQSMGGMT
VNSSHPDSDRESFVSRVGSYALTDVGIGTSELQAGRGAGASAGAGSGGGG
GLSPTSTVMRSIQGSELGTERDSYGGYGSDGYTNGSDSPGAQSGWERAWM
RQRGDAR*
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