prot_L-elsbetiae_contig709.15893.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig709.15893.1
Unique Nameprot_L-elsbetiae_contig709.15893.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length347
Homology
BLAST of mRNA_L-elsbetiae_contig709.15893.1 vs. uniprot
Match: D7G4K9_ECTSI (Cyclin D2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K9_ECTSI)

HSP 1 Score: 490 bits (1261), Expect = 3.710e-167
Identity = 244/321 (76.01%), Postives = 281/321 (87.54%), Query Frame = 0
Query:    1 MRAVLVDWCVEVAFQFRLSTISLHAAVSALDVCLSKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMSTAEAIHICDSQYNPSQVHSTFNIVVSNTQEATKRTVPATAAEILHRHLLSMGHTSGLVRPLSVDWEKHSH--VREENVLAGLLLDLSLLDQYMFKFRPGTLAAAALFLARVTAAYYSKEEVWVTPFAVVEKSNREVLRLYGKGVCSPFVELNGNLENRPFGAPGLGDFVASQPREAAAVRKCVDRLWLVQQDFFKHVSGLQSPHPVLFRYQHMFKGIKDKFVPMGSKRLQAYVRLGLLSKSALDSALDKHLPTTV 319
            MRAVLVDWCVEVA QFRLSTI+LHA +S+LDVCL+KVAVPRCRLQLLGVVCAMIQ+QAGGGCQVM+T+EAIHICDSQYNPSQVHSTFN+VVS TQEA  R VPAT AEILHRHL SMG  SGL  PL++DWE+HSH  +REE++LAGL++DLSLLD ++F FRPGT+AAAALFLARVT+ YY+KE +WVTP +VV K NREVLRLYGK VC PFV+ N +LE RPFGAPGLG+FVASQP EA AVR+CV+RLWLVQ+DFF H+SG QSP  VLFRYQHMFKGIK+KFVP GS RLQAY +LGL+ +  L+  LD+HLP+TV
Sbjct:  315 MRAVLVDWCVEVACQFRLSTIALHATISSLDVCLTKVAVPRCRLQLLGVVCAMIQTQAGGGCQVMNTSEAIHICDSQYNPSQVHSTFNVVVSITQEAMGRAVPATVAEILHRHLTSMGEPSGLDIPLTMDWEEHSHPRIREEHILAGLVVDLSLLDNFLFLFRPGTVAAAALFLARVTSMYYAKEGMWVTPCSVVAKKNREVLRLYGKDVCRPFVKPNKDLELRPFGAPGLGEFVASQPAEATAVRRCVERLWLVQRDFFDHLSGRQSPQHVLFRYQHMFKGIKEKFVPQGSIRLQAYQKLGLVQRGELNRMLDEHLPSTV 635          
BLAST of mRNA_L-elsbetiae_contig709.15893.1 vs. uniprot
Match: A0A6H5JEY8_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY8_9PHAE)

HSP 1 Score: 479 bits (1233), Expect = 2.570e-161
Identity = 240/321 (74.77%), Postives = 277/321 (86.29%), Query Frame = 0
Query:    1 MRAVLVDWCVEVAFQFRLSTISLHAAVSALDVCLSKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMSTAEAIHICDSQYNPSQVHSTFNIVVSNTQEATKRTVPATAAEILHRHLLSMGHTSGLVRPLSVDWEKHSH--VREENVLAGLLLDLSLLDQYMFKFRPGTLAAAALFLARVTAAYYSKEEVWVTPFAVVEKSNREVLRLYGKGVCSPFVELNGNLENRPFGAPGLGDFVASQPREAAAVRKCVDRLWLVQQDFFKHVSGLQSPHPVLFRYQHMFKGIKDKFVPMGSKRLQAYVRLGLLSKSALDSALDKHLPTTV 319
            MRAVLVDWCVEVA QFRLSTI+LHA +S+LDVCL+KVAVPRCRLQLLGVVCAMIQ+QAGGG QVM+T EAIHICDSQY PSQVHSTFN+VVS TQEA  R VPAT AEILHRHL SMG  SGL  PL++DWE+HSH  +REE++LAGL++DLSLLD ++F FRPGT+AA+ALFLARVT  YY+KE +WVTP +VV K NREVLRLYGK VC PFV+ N +LE  PFGAPGLG+FVASQP EA AVR+CV+RLWLVQ+DFF H+SG QSP  VLFRYQHMFKGIK+KF+P+GS RLQAY +LGL+ +  L+  LD+HLPTTV
Sbjct:  440 MRAVLVDWCVEVACQFRLSTIALHATISSLDVCLTKVAVPRCRLQLLGVVCAMIQTQAGGGGQVMNTPEAIHICDSQYTPSQVHSTFNVVVSITQEAMGRAVPATVAEILHRHLTSMGEPSGLDIPLTMDWEEHSHPRIREEHILAGLVVDLSLLDNFLFLFRPGTVAASALFLARVTGMYYAKEGMWVTPCSVVAKKNREVLRLYGKDVCRPFVKPNKDLELLPFGAPGLGEFVASQPAEATAVRRCVERLWLVQRDFFDHLSGRQSPQHVLFRYQHMFKGIKEKFMPLGSIRLQAYQKLGLVERGELNRMLDEHLPTTV 760          
BLAST of mRNA_L-elsbetiae_contig709.15893.1 vs. uniprot
Match: A0A2V0PPT4_9CHLO (Cyclin-A2-like n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PPT4_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 4.270e-10
Identity = 57/174 (32.76%), Postives = 91/174 (52.30%), Query Frame = 0
Query:    1 MRAVLVDWCVEVAFQFRLSTISLHAAVSALDVCLSKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMSTAEAIHICDSQYNPSQVHSTFNIVVSNTQEATKRTVPATAAEILHRHLLSMGHTSGLVRPLSVDWEKHSHVREENVLAGLLLDLSLLDQYMFKFRPGTLAAAALFLAR 174
            MRA+LVDW VEVA ++RL + +LH  ++ LD  LSKV + R +LQL G+ C    S+        +  E   I D+ Y+P Q+ +   +V+     + + T+P TA   L R+L +           + D   H        LA  L +++L+D+   +  P ++AAA++FLAR
Sbjct:  134 MRAILVDWLVEVALEYRLCSDTLHLTIALLDRFLSKVPISRDQLQLAGIACMWAASKYEE-IYAPTAREFCFITDNTYSPEQLVAMEALVLRGL--SFRLTLP-TAKAFLRRYLQAS----------AADERLH-------FLASFLCEVALMDEASMRHSPSSIAAASVFLAR 286          
BLAST of mRNA_L-elsbetiae_contig709.15893.1 vs. uniprot
Match: A0A0K9PP11_ZOSMR (Cyclin A-like protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PP11_ZOSMR)

HSP 1 Score: 69.3 bits (168), Expect = 1.780e-9
Identity = 61/177 (34.46%), Postives = 93/177 (52.54%), Query Frame = 0
Query:    2 RAVLVDWCVEVAFQFRLSTISLHAAVSALDVCLSKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMS---TAEAIHICDSQYNPSQVHSTFNIVVSNTQEATKRTVPATAAEILHRHLLSMGHTSGLVRPLSVDWEKHSHVREENVLAGLLLDLSLLDQYMFKFRPGTLAAAALFLARV 175
            R VLVDW VEVA ++ LS+ +L+ AVS LD  LS+ ++P+ +LQLLGV C  + ++     + MS   +AE   I D+ +   +V S   I V    E  +  VP T   +           S L+  LS+  + +    +   L   L +LSLLD    ++ P  +AA+A+FLAR+
Sbjct:  132 RMVLVDWLVEVASEYNLSSHTLYLAVSCLDRFLSRRSIPKSKLQLLGVACMSVAAKY----EEMSPPNSAEFADITDNAFTKREV-SDMEINVLKVLEW-QIGVPTTKTFL-----------SRLLLLLSIQIQNNGSGTQLEFLTDYLAELSLLDYSCIRYPPSMIAASAVFLARL 291          
BLAST of mRNA_L-elsbetiae_contig709.15893.1 vs. uniprot
Match: F6H0J4_VITVI (Cyclin N-terminal domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=F6H0J4_VITVI)

HSP 1 Score: 68.2 bits (165), Expect = 4.360e-9
Identity = 60/187 (32.09%), Postives = 93/187 (49.73%), Query Frame = 0
Query:    1 MRAVLVDWCVEVAFQFRLSTISLHAAVSALDVCLSKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMSTAEAIHICDSQYNPSQVHSTFNIVVSNTQ-EATKRTVPATAAEILHRHLLSMGHTSGLVRPLSVDWEKHSHVREENVLAGLLLDLSLLDQYMFKFRPGTLAAAALFLARVTAAYYSKEEVW 186
            MRA+L+DW VEVA ++RL+  +L   V+ +D  LS   + R +LQLLG+ C MI ++    C  +  AE  +I D+ Y+  +V    + V++  + E T  T      + +H          G  +  S+  E          LA  L +LSLL+  M  + P  +AA+A FLAR     +S E+ W
Sbjct:  135 MRAILIDWLVEVAEEYRLAPDTLFLTVNYIDRYLSGNVMNRKQLQLLGIACMMIAAKYEEIC-ALQVAEFCYITDNTYSKEEVLQMESAVLNYLKFEMTVPTTKCFLRQFIHA-------AQGNNKDPSLQLE---------CLASYLTELSLLEYNMLCYAPSLIAASATFLARFIL--FSAEKPW 302          
BLAST of mRNA_L-elsbetiae_contig709.15893.1 vs. uniprot
Match: Q9XGI5_SOLLC (Cyclin A1 n=15 Tax=Solanoideae TaxID=424551 RepID=Q9XGI5_SOLLC)

HSP 1 Score: 68.6 bits (166), Expect = 4.520e-9
Identity = 61/174 (35.06%), Postives = 90/174 (51.72%), Query Frame = 0
Query:    1 MRAVLVDWCVEVAFQFRLSTISLHAAVSALDVCLSKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMSTAEAIHICDSQYNPSQVHSTFNIVVSNTQEATKRTVPATAAEILHRHLLSMGHTSGLVRPLSVDWEKHSHVREENVLAGLLLDLSLLDQYMFKFRPGTLAAAALFLAR 174
            MRA+L+DW VEVA ++RL   +LH  ++ +D  LS   + R RLQLLGV C MI S+    C      E  +I D+ Y   +V    + V++  +   + T P TA   L R + +     GL   LS+  E          LA  + +LSLL+  M  + P  +AA+A+FLA+
Sbjct:  255 MRAILIDWLVEVAEEYRLVPDTLHLTINYIDRYLSGNLMDRQRLQLLGVACMMIASKYEEIC-APQVEEFCYITDNTYFKEEVLQMESAVLNYLKF--EMTAP-TAKCFLRRFVRA---AQGLNEVLSLQLEH---------LASYIAELSLLEYNMLCYAPSLIAASAIFLAK 412          
BLAST of mRNA_L-elsbetiae_contig709.15893.1 vs. uniprot
Match: I1MA73_SOYBN (B-like cyclin n=9 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1MA73_SOYBN)

HSP 1 Score: 68.6 bits (166), Expect = 4.620e-9
Identity = 60/175 (34.29%), Postives = 88/175 (50.29%), Query Frame = 0
Query:    1 MRAVLVDWCVEVAFQFRLSTISLHAAVSALDVCLSKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMSTAEAIHICDSQYNPSQVHSTFNIVVSNTQ-EATKRTVPATAAEILHRHLLSMGHTSGLVRPLSVDWEKHSHVREENVLAGLLLDLSLLDQYMFKFRPGTLAAAALFLAR 174
            MRA+LVDW VEVA ++RL   +L+  V+ LD  LS  A+ R RLQLLGV C MI S+    C      E  +I D+ Y   +V    + V++  + E T  TV       L R + +  H    +  L +++           L   + +LSLL+  M  + P  +AA+ +FLAR
Sbjct:  270 MRAILVDWLVEVAEEYRLVPETLYLTVNYLDRYLSGNAMNRQRLQLLGVSCMMIASKYEEIC-APQVEEFCYITDNTYLKEEVLQMESAVLNYLKFEMTAPTVKC----FLRRFVRAAAHDVQEIPSLQLEY-----------LTNFIAELSLLEYSMLSYPPSLIAASVIFLAR 428          
BLAST of mRNA_L-elsbetiae_contig709.15893.1 vs. uniprot
Match: UPI00053CAA44 (cyclin-A1-2 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053CAA44)

HSP 1 Score: 68.6 bits (166), Expect = 4.720e-9
Identity = 64/193 (33.16%), Postives = 92/193 (47.67%), Query Frame = 0
Query:    1 MRAVLVDWCVEVAFQFRLSTISLHAAVSALDVCLSKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMSTAEAIHICDSQYNPSQV---------HSTFNIVVSNTQEATKRTVPATAA----------EILHRHLLSMGHTSGLVRPLSVDWEKHSHVREENVLAGLLLDLSLLDQYMFKFRPGTLAAAALFLAR 174
            MRAVLVDW VEVA ++RL   +L+ +V+ +D  LS   + R +LQLLGV C MI ++    C      E  +I D+ Y  ++V         +  F I     +   +R V A             E LH + + M +     + L V  E          LA  L +LSLLD  M ++ P  +AA+A+FLAR
Sbjct:  259 MRAVLVDWLVEVAEEYRLIPETLYLSVNYIDRYLSGNVINRQKLQLLGVACMMIAAKYEEICPPQ-VEEFCYITDNTYFKNEVLEMESSVLNYLKFEITAPTAKCFLRRFVRAAQGTNEVLCHVQIEFLHVYSVGMSNRISHFQVLPVQLE---------CLASYLAELSLLDYAMLQYLPSLVAASAVFLAR 441          
BLAST of mRNA_L-elsbetiae_contig709.15893.1 vs. uniprot
Match: M4E076_BRARP (Cyclin N-terminal domain-containing protein n=5 Tax=Brassica TaxID=3705 RepID=M4E076_BRARP)

HSP 1 Score: 67.8 bits (164), Expect = 6.020e-9
Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 0
Query:    1 MRAVLVDWCVEVAFQFRLSTISLHAAVSALDVCLSKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMSTAEAI----HICDSQYNPSQVHSTFNIVVSNTQEATKRTVPATAAEILHRHLLSMGHTSGLVRPLSVDWEKHSHVREENVLAGLLLDLSLLDQYMFKFRPGTLAAAALFLAR 174
            MRA+L+DW VEVA +F L   +L+ AV+ LD  LS   + +  LQLLGV C MI ++  G   V +    +    +I D  Y+ +++    + V++      K  +    A     H +  G    +           SH+  E+ LA  L +LSLLD  M ++ P  +AA+A+FLAR
Sbjct:  136 MRAILIDWLVEVAEEFSLPPETLYLAVNCLDRYLSGNVITKLNLQLLGVSCIMISAKYYGRGSVRAPLRQVESFCYITDYTYSRNELLEMESCVLNYL----KFELTTPTANCFLSHFVPQGKREEV---------PSSHLLFES-LASYLCELSLLDYAMLRYAPSLVAASAVFLAR 299          
BLAST of mRNA_L-elsbetiae_contig709.15893.1 vs. uniprot
Match: A0A2I4GLD0_JUGRE (B-like cyclin n=11 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4GLD0_JUGRE)

HSP 1 Score: 68.2 bits (165), Expect = 6.170e-9
Identity = 57/174 (32.76%), Postives = 89/174 (51.15%), Query Frame = 0
Query:    1 MRAVLVDWCVEVAFQFRLSTISLHAAVSALDVCLSKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMSTAEAIHICDSQYNPSQVHSTFNIVVSNTQEATKRTVPATAAEILHRHLLSMGHTSGLVRPLSVDWEKHSHVREENVLAGLLLDLSLLDQYMFKFRPGTLAAAALFLAR 174
            MRAVL+DW VEVA ++RL   +L   V+ +D  LS   V R RLQLLGV C MI ++    C   S  E  ++ D+ Y   +V    + V+++     K  + A  A+   R  + +   +  V  + ++            LA  L++LSLL+  M ++ P  +AA+A FLA+
Sbjct:  269 MRAVLIDWLVEVAEEYRLLPDTLFLTVNYIDRYLSGNVVNRQRLQLLGVACMMIAAKYEEIC-APSVDEFCYVTDNTYFKEEVLQMESAVLNSL----KFEMTAPTAKCFLRRFVCVVQATSKVPSMQLE-----------CLANYLMELSLLEYSMLRYSPSLVAASATFLAK 426          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig709.15893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4K9_ECTSI3.710e-16776.01Cyclin D2 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JEY8_9PHAE2.570e-16174.77Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A2V0PPT4_9CHLO4.270e-1032.76Cyclin-A2-like n=1 Tax=Raphidocelis subcapitata Ta... [more]
A0A0K9PP11_ZOSMR1.780e-934.46Cyclin A-like protein n=1 Tax=Zostera marina TaxID... [more]
F6H0J4_VITVI4.360e-932.09Cyclin N-terminal domain-containing protein n=1 Ta... [more]
Q9XGI5_SOLLC4.520e-935.06Cyclin A1 n=15 Tax=Solanoideae TaxID=424551 RepID=... [more]
I1MA73_SOYBN4.620e-934.29B-like cyclin n=9 Tax=Glycine subgen. Soja TaxID=1... [more]
UPI00053CAA444.720e-933.16cyclin-A1-2 isoform X1 n=2 Tax=Tarenaya hasslerian... [more]
M4E076_BRARP6.020e-932.58Cyclin N-terminal domain-containing protein n=5 Ta... [more]
A0A2I4GLD0_JUGRE6.170e-932.76B-like cyclin n=11 Tax=Juglandaceae TaxID=16714 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039361CyclinPIRSFPIRSF001771Cyclin_A_B_D_Ecoord: 1..103
e-value: 1.9E-14
score: 51.6
coord: 121..189
e-value: 6.5E-6
score: 23.5
IPR039361CyclinPANTHERPTHR10177CYCLINEcoord: 1..177
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 1..84
e-value: 1.4E-10
score: 41.0
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 141..177
e-value: 5.8E-6
score: 26.4
NoneNo IPR availableGENE3D1.10.472.10coord: 102..178
e-value: 1.2E-25
score: 92.2
NoneNo IPR availableGENE3D1.10.472.10coord: 1..99
e-value: 1.2E-25
score: 92.2
NoneNo IPR availablePANTHERPTHR10177:SF231coord: 1..177
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 1..85
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 147..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig709contigL-elsbetiae_contig709:26561..33648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig709.15893.1mRNA_L-elsbetiae_contig709.15893.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig709 23855..33717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig709.15893.1 ID=prot_L-elsbetiae_contig709.15893.1|Name=mRNA_L-elsbetiae_contig709.15893.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=347bp
MRAVLVDWCVEVAFQFRLSTISLHAAVSALDVCLSKVAVPRCRLQLLGVV
CAMIQSQAGGGCQVMSTAEAIHICDSQYNPSQVHSTFNIVVSNTQEATKR
TVPATAAEILHRHLLSMGHTSGLVRPLSVDWEKHSHVREENVLAGLLLDL
SLLDQYMFKFRPGTLAAAALFLARVTAAYYSKEEVWVTPFAVVEKSNREV
LRLYGKGVCSPFVELNGNLENRPFGAPGLGDFVASQPREAAAVRKCVDRL
WLVQQDFFKHVSGLQSPHPVLFRYQHMFKGIKDKFVPMGSKRLQAYVRLG
LLSKSALDSALDKHLPTTVVATALHHPDPQEATPMGSTVATAVPVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039361Cyclin
IPR006671Cyclin_N
IPR004367Cyclin_C-dom
IPR036915Cyclin-like_sf