prot_L-elsbetiae_contig7088.15890.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7088.15890.1
Unique Nameprot_L-elsbetiae_contig7088.15890.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length230
Homology
BLAST of mRNA_L-elsbetiae_contig7088.15890.1 vs. uniprot
Match: D7FM72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM72_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 1.450e-85
Identity = 130/195 (66.67%), Postives = 145/195 (74.36%), Query Frame = 0
Query:   46 VNQDTMLHRHSQDSFFLFFRTAKIRNEVVGKEPFEVELEAGSFYWGDHLANPIVHKICVGKHELDCMDVEFKAGRPKPARLGPALPNDTPKRDLCFENHVLRAYRVKLAPGESVDGALAIEGGEGSESKGLEVGFAYLAVALKSARLSRGGVKAGGNWWCGGGVQD------------TWSNVGEQEAEAMILQP 228
            +NQDTM HRHSQDSFFLFFRTA+IRNEVVGKEPFEVELEAGSFYWGDHLANPI+HK+CVG  +LDCMD+E KA RP+PA L PALP+ T +RDLCFEN VLRAYRVKLAPGE +       GG+GS    + V F YLAVA+  A+LS GGV  G NWWCG    D             WSNVGE+E E MILQP
Sbjct:    1 MNQDTMYHRHSQDSFFLFFRTAQIRNEVVGKEPFEVELEAGSFYWGDHLANPIIHKVCVGNRKLDCMDIEIKADRPRPASLSPALPS-TLQRDLCFENGVLRAYRVKLAPGECIGSVFDAGGGDGSM---VPVPFGYLAVAMTIAKLSSGGVMPGDNWWCGKSSGDISAGDAGTTTDGAWSNVGEEEVEVMILQP 191          
BLAST of mRNA_L-elsbetiae_contig7088.15890.1 vs. uniprot
Match: A0A6H5KK12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK12_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.200e-34
Identity = 70/129 (54.26%), Postives = 81/129 (62.79%), Query Frame = 0
Query:  112 MDVEFKAGRPKPARLGPALPNDTPKRDLCFENHVLRAYRVKLAPGESVDGALAIEGGEGSESKGLEVGFAYLAVALKSARLSRGGVKAGGNWWCGGGVQD------------TWSNVGEQEAEAMILQP 228
            MD+E K  RP+PA + PALP+ T +RDLCFEN VLRAYRVKLAPGE +       GG+GS    + V F YLAVA+  A+LS G VK G NWWCG    D             WSNVGE+E E MILQP
Sbjct:    1 MDIEIKVDRPRPASVSPALPS-TSQRDLCFENGVLRAYRVKLAPGEFIGSVFDAGGGKGSM---VPVPFGYLAVAMTIAQLSSGEVKPGDNWWCGKSSGDISAGEAGTTADGAWSNVGEEEVEVMILQP 125          
BLAST of mRNA_L-elsbetiae_contig7088.15890.1 vs. uniprot
Match: UPI00067D068C (hypothetical protein n=1 Tax=Bradyrhizobium tropiciagri TaxID=312253 RepID=UPI00067D068C)

HSP 1 Score: 77.0 bits (188), Expect = 1.760e-13
Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = 0
Query:   20 VEVYDEPLHPTVFENNCVRVLKVDCPVNQDTMLHRHSQDSFFLFFRTAKIRNEVVGKEPFEVELEAGSFYWGDHLANPIVHKICVGKHELDCMDVEFKAGRPKPARLGPALPNDTPKRDLCFENHVLRAYRVKLAPGES 158
            V V   P H   F+++ + ++ V  P    T  H H QD  F+    AKI+N+V+GKEP E+E + G   +  +   P VH++   + +     + F    P+P R   ++     K ++  +N  +RA+R+KL+PGES
Sbjct:   29 VPVTKAPFHLFTFQDDNMSLVSVTLPPGFSTGYHSHDQDLVFVITAGAKIKNQVLGKEPVELEFKTGEVRFASYTKTPGVHQVINIEKDHAMRLLAFAIVYPEPGRY--SVSTRPAKYEVALDNDRVRAWRLKLSPGES 165          
BLAST of mRNA_L-elsbetiae_contig7088.15890.1 vs. uniprot
Match: A0A836C8W9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W9_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.850e-10
Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 0
Query:   17 LEYVEVYDEPLHPTVFENNCVRVLKVDCPVNQDTMLHRHSQDSFFLFFRTAKIRNEVVGKEPFEVELEAGSFYWGDHLANPIVHKICV 104
            +EYVEVYDEP+H   F N             +  M HRHSQDSF++   + +  N    K   E+ L+AG  +W  + A  +VH++C+
Sbjct:   12 VEYVEVYDEPIHKCQFSNEYAYCYIATINPGESCMWHRHSQDSFYVALASCEAINRPTDKPEGELNLKAGDKWWSLYKAKDMVHQVCL 99          
BLAST of mRNA_L-elsbetiae_contig7088.15890.1 vs. uniprot
Match: A0A2V9ZL29_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9ZL29_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 4.450e-6
Identity = 26/67 (38.81%), Postives = 39/67 (58.21%), Query Frame = 0
Query:   20 VEVYDEPLHPTVFENNCVRVLKVDCPVNQDTMLHRHSQDSFFLFFRTAKIRNEVVGKEPFEVELEAG 86
            VE+  EP H    EN  VRV KV+ P + +T++H H  D FF+     ++ N+V GK P  ++L+ G
Sbjct:   27 VEITAEPHHHLALENEYVRVFKVEVPSHNETLMHWHHHDYFFVTLGDTQVENDVKGKPPATLKLQDG 93          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7088.15890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FM72_ECTSI1.450e-8566.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KK12_9PHAE3.200e-3454.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00067D068C1.760e-1330.94hypothetical protein n=1 Tax=Bradyrhizobium tropic... [more]
A0A836C8W9_9STRA3.850e-1036.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2V9ZL29_9BACT4.450e-638.81Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 25..118
e-value: 3.4E-12
score: 48.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7088contigL-elsbetiae_contig7088:368..2975 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7088.15890.1mRNA_L-elsbetiae_contig7088.15890.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7088 2..2975 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7088.15890.1 ID=prot_L-elsbetiae_contig7088.15890.1|Name=mRNA_L-elsbetiae_contig7088.15890.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=230bp
MATAETPALPVDGPAVLEYVEVYDEPLHPTVFENNCVRVLKVDCPVNQDT
MLHRHSQDSFFLFFRTAKIRNEVVGKEPFEVELEAGSFYWGDHLANPIVH
KICVGKHELDCMDVEFKAGRPKPARLGPALPNDTPKRDLCFENHVLRAYR
VKLAPGESVDGALAIEGGEGSESKGLEVGFAYLAVALKSARLSRGGVKAG
GNWWCGGGVQDTWSNVGEQEAEAMILQPK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll