prot_L-elsbetiae_contig7079.15883.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7079.15883.1
Unique Nameprot_L-elsbetiae_contig7079.15883.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length104
Homology
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BLAST of mRNA_L-elsbetiae_contig7079.15883.1 vs. uniprot
Match: A0A6H5L6R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R2_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.500e-16
Identity = 48/58 (82.76%), Postives = 49/58 (84.48%), Query Frame = 0 
Query:    1 MYRGN--QSMGPRHG-HMTHGYMNTMGMQAPPPDGS-PLG-QGMMGRYGMQVPAGGPA 53
            MYRGN  QSMGPRHG HM  G+MN MGMQAPPPDGS PL  QGMMGRYGMQVPAGGPA
Sbjct:   46 MYRGNNNQSMGPRHGGHMNPGFMNNMGMQAPPPDGSSPLTHQGMMGRYGMQVPAGGPA 103
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BLAST of mRNA_L-elsbetiae_contig7079.15883.1 vs. uniprot
Match: D7FVL9_ECTSI (Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL9_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 3.620e-16
Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 0 
Query:    1 MYRGN-QSMGPRHG-HMTHGYMNTMGMQAPPPDGS-PLG-QGMMGRYGMQVPAGGPA 53
            MYRGN QSMGPRHG HM  G+MN MGMQAPPPDGS PL  QGMMGRYGMQVPAGGPA
Sbjct:  334 MYRGNNQSMGPRHGGHMNPGFMNNMGMQAPPPDGSSPLTHQGMMGRYGMQVPAGGPA 390
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7079.15883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6R2_9PHAE1.500e-1682.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVL9_ECTSI3.620e-1684.21Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7079contigL-elsbetiae_contig7079:442..1895 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7079.15883.1mRNA_L-elsbetiae_contig7079.15883.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7079 411..1895 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7079.15883.1 ID=prot_L-elsbetiae_contig7079.15883.1|Name=mRNA_L-elsbetiae_contig7079.15883.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp
MYRGNQSMGPRHGHMTHGYMNTMGMQAPPPDGSPLGQGMMGRYGMQVPAG
GPAAAVAAQHAAAYHAAAAQHQQQQQQVPPGGYGMMHLNNTMGMMNIAGG
GVGA
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