prot_L-elsbetiae_contig7074.15879.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig7074.15879.1
Unique Name	prot_L-elsbetiae_contig7074.15879.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	301

Homology

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BLAST of mRNA_L-elsbetiae_contig7074.15879.1 vs. uniprot
Match: D7G5N8_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5N8_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 4.670e-98
Identity = 192/237 (81.01%), Postives = 202/237 (85.23%), Query Frame = 0

Query:   66 TSVRMQQQPGSDEELQVAVSRLAAQVEDLTAMVAQLAAEPAGGAGGAKGINGAVVDTGAGVPVVSTKAKGESKPPLVSTSAAQQRIDQWLRESGGAVAAAPXXXXXXXXXXXXXASAPAVAXXXXXXXXXXXPPAEEAG--GSGYKVKIEWEGAIHEVTCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCISYPESDVHFAVVDEEDLP 300
            ++VRMQQ  GSD+ELQVAVS+LA QVE+LTAMVAQLAAEP G AG AK ING VVD G+ +PVVSTKAKG S P LVSTSAAQQRIDQWLRESGG  A+AP  XXXXXXXXXXX       XXXXXXXXXXX         GSGYKVKIEWEGAIHEV CDAETTLLEAAMDAGLELPSSCMSGSCLTCPGK+VSGSVDQSEGVLEDEQ +AGFLLTCISYPESDVHFAVVDEEDLP
Sbjct:   61 SAVRMQQGSGSDQELQVAVSKLAGQVEELTAMVAQLAAEPGGNAGAAKAINGGVVDGGSALPVVSTKAKGGSTP-LVSTSAAQQRIDQWLRESGGEAASAPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGYKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDLP 296

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BLAST of mRNA_L-elsbetiae_contig7074.15879.1 vs. uniprot
Match: A0A835YL41_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL41_9STRA)

HSP 1 Score: 157 bits (396), Expect = 3.320e-43
Identity = 122/233 (52.36%), Postives = 145/233 (62.23%), Query Frame = 0

Query:   76 SDEELQVAVSRLAAQVEDLTAMVAQLAAEPAGGAGGAKG--INGAVV-------DTGAGVPVVSTKAKGESKPPLVSTSAAQQRIDQWLRESGGAVAAAPXXXXXXXXXXXXXASAPAVAXXXXXXXXXXXPPAEEAGGSGYKVKIEWEGAIHEVTCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCISYPESDVHFAVVDEEDL 299
            S +EL  AV  L AQV  LTA+V ++AA  A GA  A    INGA V        TG     V++   GE    LV  SAA+ RI  +L   G A     XXXXXXXXXXXXX    AV   XXXXX    P      G GY V I+W+GA H V CD ETT+LEAAMDAGL+LP SCMSGSCLTCPG+L +G V+Q +GVLED+Q  AG +LTC+SYP SD+ F V+ E++L
Sbjct:    8 SPQELVKAVEALQAQVTQLTALVKEMAASEANGAAAAPAAKINGAAVPLKAPTLQTGLIAGTVASAPPGEI---LVPVSAAEARIQSFLASQGKAAPXXXXXXXXXXXXXXXXXXXAAVPAAXXXXXPEAPP------GDGYVVTIDWDGATHVVRCDGETTVLEAAMDAGLDLPHSCMSGSCLTCPGRLSAGRVEQGDGVLEDDQIAAGLMLTCVSYPLSDLRFEVIGEDEL 231

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BLAST of mRNA_L-elsbetiae_contig7074.15879.1 vs. uniprot
Match: A0A2J6KNW1_LACSA (Ferredoxin n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6KNW1_LACSA)

HSP 1 Score: 108 bits (269), Expect = 2.250e-25
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 0

Query:  208 YKVKIEWEGAIHEVTCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCISYPESDVHFAVVDEEDL 299
            YKV IE EG   E+  D + T+LE A+D+G+ +P  C  G C+TCP KL+SGSVDQSEG+L D+  E G+ L C+SYP+SD H  ++ EE+L
Sbjct:   49 YKVAIEHEGETTELEVDPDETILEKALDSGMSVPHDCKLGVCMTCPAKLLSGSVDQSEGMLSDDVIERGYSLLCVSYPKSDCHIKIIPEEEL 140

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BLAST of mRNA_L-elsbetiae_contig7074.15879.1 vs. uniprot
Match: A0A103Y2Z7_CYNCS (Ferredoxin n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103Y2Z7_CYNCS)

HSP 1 Score: 107 bits (268), Expect = 2.990e-25
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 0

Query:  208 YKVKIEWEGAIHEVTCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCISYPESDVHFAVVDEEDL 299
            YKV IE EG   E+  D + T+LE A+D GL++P  C  G C+TCP KL+SGSV+QSEG+L D+  E G+ L C+SYP+SD H  ++ EE+L
Sbjct:   47 YKVSIEHEGQTTELEVDPDETILEKALDTGLDVPHDCKLGVCMTCPAKLLSGSVNQSEGMLSDDVIERGYSLLCVSYPKSDCHIKIIPEEEL 138

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BLAST of mRNA_L-elsbetiae_contig7074.15879.1 vs. uniprot
Match: UPI0010A2FF49 (ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2FF49)

HSP 1 Score: 107 bits (266), Expect = 5.720e-25
Identity = 50/101 (49.50%), Postives = 66/101 (65.35%), Query Frame = 0

Query:  199 PAEEAGGSGYKVKIEWEGAIHEVTCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCISYPESDVHFAVVDEEDL 299
            PA  A    YKV IE +G + E+  D E T+L  A+D+GLE+P  C  G C+TCP +L+SGSVDQSEG+L D+  E G+ L C SYP SD H   + E++L
Sbjct:   37 PAPSAIVHSYKVVIEHQGELRELEIDPEETILSKALDSGLEVPHDCKLGVCMTCPARLLSGSVDQSEGMLSDDVVERGYALLCASYPRSDCHIRTIPEDEL 137

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BLAST of mRNA_L-elsbetiae_contig7074.15879.1 vs. uniprot
Match: A0A7J7LHT5_9MAGN (Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LHT5_9MAGN)

HSP 1 Score: 105 bits (262), Expect = 1.820e-24
Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 0

Query:  208 YKVKIEWEGAIHEVTCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCISYPESDVHFAVVDEEDL 299
            YKV IE EG+I E+  D + T+L  A+D GL +P  C  G C+TCP KL+SGSVDQSEG+L D+  + G+ L C++YP SD H   + EE+L
Sbjct:   39 YKVVIEHEGSIKELEVDEDETILNKALDIGLSVPHDCKLGVCMTCPAKLMSGSVDQSEGMLSDDVVDNGYALLCVAYPRSDCHIRTIPEEEL 130

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BLAST of mRNA_L-elsbetiae_contig7074.15879.1 vs. uniprot
Match: A0A1Q3CXQ9_CEPFO (Fer2 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CXQ9_CEPFO)

HSP 1 Score: 105 bits (261), Expect = 4.540e-24
Identity = 49/92 (53.26%), Postives = 61/92 (66.30%), Query Frame = 0

Query:  208 YKVKIEWEGAIHEVTCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCISYPESDVHFAVVDEEDL 299
            YKV IE EG   E+    + T+L  A+D+GL +P  C  G C+TCP KLVSG+VDQSEG+L D+  E G+ L C SYP SD HF  + EEDL
Sbjct:   60 YKVVIEHEGQATELDVGPDETILAKALDSGLSVPHDCKLGVCMTCPAKLVSGTVDQSEGMLSDDVVERGYALLCASYPRSDCHFRTIPEEDL 151

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BLAST of mRNA_L-elsbetiae_contig7074.15879.1 vs. uniprot
Match: A0A6J1IWL8_CUCMA (Ferredoxin n=4 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1IWL8_CUCMA)

HSP 1 Score: 104 bits (260), Expect = 5.700e-24
Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 0

Query:  208 YKVKIEWEGAIHEVTCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCISYPESDVHFAVVDEEDL 299
            YKV IE EG   E+  DA+ ++L +A+D GL++P  C  G C+TCP +LVSG+VDQSEG+L D+  E G+ L C++YP SD H   + EE+L
Sbjct:   56 YKVVIEHEGQTTELEVDADESILNSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCVAYPRSDCHIQTIPEEEL 147

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BLAST of mRNA_L-elsbetiae_contig7074.15879.1 vs. uniprot
Match: A0A1S2YX51_CICAR (ferredoxin C 1, chloroplastic n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YX51_CICAR)

HSP 1 Score: 103 bits (258), Expect = 8.990e-24
Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0

Query:  206 SGYKVKIEWEGAIHEVTCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCISYPESDVHFAVVDEEDL 299
            S YKV IE EG   ++  + + T+L  A+D+GL +P  C  G C+TCP KL+SGSVDQS+G+L D+  E G+ L C SYP SD HF  + E++L
Sbjct:   46 SSYKVVIEHEGQTTQLEVEPDETILSKALDSGLSVPHDCKLGVCMTCPAKLISGSVDQSDGMLSDDVVERGYALLCASYPRSDCHFRTIPEDEL 139

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BLAST of mRNA_L-elsbetiae_contig7074.15879.1 vs. uniprot
Match: A0A6A4QV48_LUPAL (Ferredoxin n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A4QV48_LUPAL)

HSP 1 Score: 103 bits (257), Expect = 1.040e-23
Identity = 44/94 (46.81%), Postives = 65/94 (69.15%), Query Frame = 0

Query:  206 SGYKVKIEWEGAIHEVTCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCISYPESDVHFAVVDEEDL 299
            S YKV +E EG   E+  + + ++L  A+D+GL +P  C  G C+TCP +L+SGSVDQS+G+L D+  E+G+ L C+SYP SD H  ++ EE+L
Sbjct:   39 SSYKVVVEHEGKSTELEVEGDESILSKALDSGLNVPHDCKLGVCMTCPARLLSGSVDQSDGMLSDDVVESGYTLLCVSYPRSDCHIRIIPEEEL 132

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig7074.15879.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig7074.15879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G5N8_ECTSI	4.670e-98	81.01	Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G...	[more]
A0A835YL41_9STRA	3.320e-43	52.36	Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A2J6KNW1_LACSA	2.250e-25	52.17	Ferredoxin n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6...	[more]
A0A103Y2Z7_CYNCS	2.990e-25	52.17	Ferredoxin n=1 Tax=Cynara cardunculus var. scolymu...	[more]
UPI0010A2FF49	5.720e-25	49.50	ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alb...	[more]
A0A7J7LHT5_9MAGN	1.820e-24	51.09	Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 ...	[more]
A0A1Q3CXQ9_CEPFO	4.540e-24	53.26	Fer2 domain-containing protein n=1 Tax=Cephalotus ...	[more]
A0A6J1IWL8_CUCMA	5.700e-24	50.00	Ferredoxin n=4 Tax=Cucurbitaceae TaxID=3650 RepID=...	[more]
A0A1S2YX51_CICAR	8.990e-24	48.94	ferredoxin C 1, chloroplastic n=1 Tax=Cicer arieti...	[more]
A0A6A4QV48_LUPAL	1.040e-23	46.81	Ferredoxin n=1 Tax=Lupinus albus TaxID=3870 RepID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..104
None	No IPR available	PANTHER	PTHR43112:SF9	FERREDOXIN C 1, CHLOROPLASTIC	coord: 205..299
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 205..299
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..13
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 14..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 27..31
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..300
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..31 score: 0.743
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 208..299 e-value: 8.2E-26 score: 87.6
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 213..285 e-value: 1.3E-12 score: 47.4
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 208..297 score: 11.239
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 196..298 e-value: 8.0E-24 score: 85.6
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 197..293

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig7074	contig	L-elsbetiae_contig7074:3196..9180 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig7074.15879.1	mRNA_L-elsbetiae_contig7074.15879.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig7074 1531..9259 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig7074.15879.1 ID=prot_L-elsbetiae_contig7074.15879.1|Name=mRNA_L-elsbetiae_contig7074.15879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=301bp
MQQGRPVGSPMKRATSTLLLAFLAVCRLCGAFLPAPARTTTTIVAVRHRA
LSSSPSARSQQGRHRTSVRMQQQPGSDEELQVAVSRLAAQVEDLTAMVAQ
LAAEPAGGAGGAKGINGAVVDTGAGVPVVSTKAKGESKPPLVSTSAAQQR
IDQWLRESGGAVAAAPAAPVAPAAPAAPAASAPAVAAAPVAAPEVAAPPA
EEAGGSGYKVKIEWEGAIHEVTCDAETTLLEAAMDAGLELPSSCMSGSCL
TCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCISYPESDVHFAVVDEEDLP
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010241	Fd_pln
IPR001041	2Fe-2S_ferredoxin-type
IPR012675	Beta-grasp_dom_sf
IPR036010	2Fe-2S_ferredoxin-like_sf