prot_L-elsbetiae_contig707.15875.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig707.15875.1
Unique Nameprot_L-elsbetiae_contig707.15875.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1157
Homology
BLAST of mRNA_L-elsbetiae_contig707.15875.1 vs. uniprot
Match: D8LBJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ7_ECTSI)

HSP 1 Score: 1043 bits (2697), Expect = 0.000e+0
Identity = 685/1105 (61.99%), Postives = 737/1105 (66.70%), Query Frame = 0
Query:   45 IPDEDEAARDVAKAMSAVRPLLERYRHRYEELTSLLARSQASASSATVEARELCRDHLQTFGRLEDGCTTLAQELGRAAAAAAAAGEKQDVLLSKSKPEFQNECPYCGGGGVEK-EAAXRXXXAADAAADADALAARHRSLVQRRRRVRSALRVLEVSESGRAALETGAAGAERAGGRSARADEAMKAIESLRGLLGEYRVGGGDAPEHTGTRSPPARPALAVPRQASCV-----------TTAAGGVAGAADGELARVARGRLEWLTRRLRAHLSSDLAGALRQVDPLAAA----AGSGEAQGGXXXXXXXRGGHRXXXXXXXXXXXXXXXXXQGPEWFLSFLLRALEAYRPLLLLFSDAARPAPTTSAAAGXXXXEARAGAGASGWEAGGVDPVAYFARGLTLLARRRLRAQLGAAAADGSLLSHTVEEALAFDRRLDEEAGYAECPARFPQQTWPRCVEVFAQDEERFELWMTSDANAAEAKLGEAAAAPGAWRAVEWQNGPTPSTPVTPSAVALCRLFWDVAERYRPLRDPLKQLRFARNIQEPVLRSVRASGEAVGAGPPPSAAAGGVTSAADGLTATWAAALGAAMLGPAQDADEDKSPIGRWRGYCLAVASCAYVCAVLRESEDDMLFAEMAE---AXXXXXXXXXXEVRDPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGVVRAVGAQGSIIGPTHAISAALTTLKGAARLVRKASSSTTSGHHGIGGDTGNGDSAGTGSG----SRRPGGXXXXXXXXXXXXEAEVXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAVGEWTGSVFGQEAGRYGIMLEAMVRGAVESCRDGFLWRTRSYLRAWDRGIAVVVPASAAQSSLSGRGPA---------AEASGRLGAGVELLETAVGVAGESLPPAQFHKFWTALASELDLTLVKQIVARRSEMSQDEGLQLWADLQVLMGPFDALARRRPERHFPALAEASVLLSLEKASTGPLEAR--------------GLFGTSQLRSLSSGLDAHGGGVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRLGPVEASMLLDKRLKGDRLAVLGYLSAAA 1103
            +PDEDEAARDVAK MS V PLL+ Y+HR+EEL  LL  SQASA+SAT  AREL +DHLQTFGRLE+GC  L QEL  AAA AAAA E  + L   + PE +      GG  + + E A +   AA   ++AD LAAR+RSLVQRRRR+RSALRVLEVSE GRAALE   AGAE  G   ARA+E MKAIE LRGLLGEYR G  D     G RSP                          TT A       DGELARV +GRLEWLT+RLRA LSS+LA ALRQ DPLAAA    AG+G    G XXXXXX GG R                 QGPEWFLSFLLRALEAYRPLLLL    A P P    A G    EAR  AG  G   G VDP+AYFARGL LLARRRLRAQLG AAAD SLLSHTVEEALAFDR LD EAGYAECPARFP QTWPRCVEVFAQ E+RFE WM SDA AA+AKL EAAA+PGAWRAV+W+NGP  STPVTPSAVALCRLF DV ERYRPLRDPLKQLRFA+++QEPVLRS    GEA    P        VTSAADGLTATWAAAL AAM+GP Q+   DKSPIGRWRGYCLA+ASCAYVCAVLRESEDDMLFA+MAE   A          E R  R                                   TAGV RAVG QGSIIGPTHAISAALT+LKGAAR VRK +S    G+   G D+G+G  AGT +         GG            E EV                           T   GE+ GSVFG+EA RY +MLEAM+RGAVESCRDGFLWRTRSYLRAWDRGIAVVV A                      AE SGRL  GVELLETA+GVA   LPP QF +FWTALASELDLTLVKQIVARR EMSQDEGLQL ADL+VLMGPFD+LARRRPERHFPALAEA+VLLSLEK   G   AR               LF  SQLRSLSSGLDAHGGGVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRR+GP EAS+LLDKRLKGDRLAVLGYLSAAA
Sbjct:    1 MPDEDEAARDVAKVMSVVGPLLKSYQHRHEELAGLLTASQASAASATAGARELSQDHLQTFGRLEEGCAGLRQELDVAAATAAAAAEAANSLSGTNIPEQRGS----GGSSLSRAEVATQRRLAA--VSEADTLAARYRSLVQRRRRMRSALRVLEVSEKGRAALE---AGAETRGQLGARAEETMKAIECLRGLLGEYRDGSSD-----GARSPSXXXXXXXXXXXXXXXXXXXXXXXXPTTTA-------DGELARVTQGRLEWLTQRLRAQLSSELAAALRQADPLAAAPVKGAGTGNGTRGGXXXXXXFGGRRGTTEGRAGSR-------QGPEWFLSFLLRALEAYRPLLLLL---ALPPP----AEGAPELEARE-AGRGG---GSVDPLAYFARGLALLARRRLRAQLGEAAADESLLSHTVEEALAFDRCLDREAGYAECPARFPHQTWPRCVEVFAQGEQRFERWMESDAKAAKAKLAEAAASPGAWRAVDWKNGPRSSTPVTPSAVALCRLFSDVTERYRPLRDPLKQLRFAKHVQEPVLRSASGGGEATKGAPXXXXXXXXVTSAADGLTATWAAALEAAMVGPGQEDGGDKSPIGRWRGYCLALASCAYVCAVLRESEDDMLFADMAETAAAAWAAAREVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETA--TAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGAS----GNRNNGTDSGSG-GAGTAASMIVEEEGDGGVRDDGSDEGVAGEVEVGDGGFVGDATTATEKREAPAAAD----TVVGGEFEGSVFGEEARRYEVMLEAMLRGAVESCRDGFLWRTRSYLRAWDRGIAVVVRAXXXXXXXXXXXXXXXXXXXXXXAEPSGRLCEGVELLETALGVAEGCLPPGQFQQFWTALASELDLTLVKQIVARRVEMSQDEGLQLLADLKVLMGPFDSLARRRPERHFPALAEAAVLLSLEK--DGRTHARKGMNTTKRTLHIEGSLFAQSQLRSLSSGLDAHGGGVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAA 1053          
BLAST of mRNA_L-elsbetiae_contig707.15875.1 vs. uniprot
Match: A0A6H5JXK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK1_9PHAE)

HSP 1 Score: 464 bits (1193), Expect = 7.850e-148
Identity = 355/574 (61.85%), Postives = 380/574 (66.20%), Query Frame = 0
Query:  620 MLGPAQDADEDKSPIGRWRGYCLAVASCAYVCAVLRESEDDMLFAEMAEAXXXXXXXXXXEVRDPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-TAGVVRAVGAQGSIIGPTHAISAALTTLKGAARLVRKASSSTTSGHHGIGGDTGNGDSAGTGSGSRRPGGXXXXXXXXXXXXEAEVXXXXXXXXXXXXXXXXXXXXXXXXXXX------TAAVGEWTGSVFGQEAGRYGIMLEAMVRGAVESCRDGFLWRTRSYLRAWDRGIAVVVPASAAQSSLSGRGP---------AAEASGRLGAGVELLETAVGVAGESLPPAQFHKFWTALASELDLTLVKQIVARRSEMSQDEGLQLWADLQVLMGPFDALARRRPERHFPALAEASVLLSLEKASTGPLEARGLFGTSQLRSLSSGLDAHGGGVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRLGPVEASMLLDKRLKGDRLAVLGYLSAAADTSND--------------GGRAGIAQGEGGAFGPSVGDRG-----GGEVVGGGGLAAAAE--APRETVISSFG 1156
            M+GP Q+   DKSPIGRWRGYCL +ASCAYVCAVLRESEDDMLFA+MAEA             + R                                    TAGV RAVG QGSIIGPTHAISAALT+LKGAAR VRK +S          G+  NG  AGT         XXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXX      T   GE+ GSVFG+EA RY +MLEAM+R AVESC DGFLWRTRSYLRAWDRGIAVVV AS                    AAE SGRL  GV+LLETA+GVA   LPP QF +FWTALAS LDLTLVKQIVARR EM+QDEGLQL ADL+VLMGPFD+LARRRPERHFPALAEA+VLLSLEK              SQLRSLSSGLDAHGG VEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRR+GP EAS+LLDKRLKGDRLAVLGYLSAAA  +                 G  G+A        PS GD G      G  VGGGG+  + E  APRE V SSFG
Sbjct:    1 MVGPGQEDGGDKSPIGRWRGYCLVLASCAYVCAVLRESEDDMLFADMAEATAAAWAAAREVSGEGRAARPSSSLGSVGNVVGAAVGGVSHAVTELATTAETATAGVARAVGVQGSIIGPTHAISAALTSLKGAARRVRKGAS----------GNRNNG--AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVGGEFEGSVFGEEARRYEVMLEAMLRSAVESCLDGFLWRTRSYLRAWDRGIAVVVHASXXXXXXXXXXXXXXXXXXSFAAEPSGRLCEGVQLLETALGVAEGCLPPGQFQQFWTALASGLDLTLVKQIVARRVEMTQDEGLQLLADLKVLMGPFDSLARRRPERHFPALAEAAVLLSLEK--------------SQLRSLSSGLDAHGGSVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAAGKNXXXXXXSNPAVAGFTVAGVVGVA--------PSGGDGGVDGALTGPSVGGGGVGVSREGAAPREAV-SSFG 539          
BLAST of mRNA_L-elsbetiae_contig707.15875.1 vs. uniprot
Match: A0A6H5JNY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY6_9PHAE)

HSP 1 Score: 451 bits (1159), Expect = 2.780e-142
Identity = 320/598 (53.51%), Postives = 354/598 (59.20%), Query Frame = 0
Query:    1 MNEPRESRDTDAAAGFGPVPSVNEILDGLAVEAGLLPGSFDDTFIPDEDEAARDVAKAMSAVRPLLERYRHRYEELTSLLARSQASASSATVEARELCRDHLQTFGRLEDGCTTLAQELGRAAAAAAAAGEKQDVLLSKSKPEFQNECPYCGGGGVEK----EAAXRXXXAADAAADADALAARHRSLVQRRRRVRSALRVLEVSESGRAALETGAAGAERAGGRSARADEAMKAIESLRGLLGEYRVGGGDAPEHTGTRSPPARPALAVPRQASC-----------VTTAAGGVAGAADGELARVARGRLEWLTRRLRAHLSSDLAGALRQVDPLAAAAGSG--------------------------------------------EAQGGXXXXXXXRGGHRXXXXXXXXXXXXXXXXXQG---------PEWFLSFLLRALEAYRPLLLLFSDAARPAPTTSAAAGXXXXEARAGAGASGWEAGGVDPVAYFARGLTLLARRRLRAQLGAAAADGSLLSHTVEEALAFDRRLDEEAGYAECPARFPQQTWPRCVEVFAQDEERFELWMTSDANAAEAKLGEAAAAPGAWRAVEWQ 530
            M+ PRE  D  AAA    VPSV EILD +AVEAGLL  +F D   PDE+EAARDVAK MS VRPLLE Y+HR+EEL  LL  SQASA+SAT +AREL RDHL+TFGRLE+GC  L Q+L  AAA AAAA E  + L   + PE +       G GV      E A +   AA   ++AD LAAR+RSLVQRRRR+RSALRVLEVSE GRAALE   AGAE  G   ARA+E MKAIE LRGLLGE+R    D     G RSP                          TTAA        GELARV +GRLEWL +RLRA LSS+LA ALRQ DPLAAA G G                                             A GG                             +G         PEWFLSFLLRALEAYRPLLLL  +  RPA       G    EAR     +GW  G VDP+AYFARGL LLARRRLRAQLGA AAD SLLSHTVEEALAFDR LD EAGYAECPARFP+QTWPRCVEVFAQ E+RFE WM SDA AA+AKL EA A+PGAWRAV+W+
Sbjct:    1 MSSPREPGDAVAAADV--VPSVKEILDMVAVEAGLLGSAFYDETTPDEEEAARDVAKVMSVVRPLLESYQHRHEELAGLLTASQASAASATADARELSRDHLKTFGRLEEGCAGLRQKLDVAAATAAAA-EAANSLSGTNIPEQR-------GSGVSSLSRAEVATQRRLAA--VSEADTLAARYRSLVQRRRRMRSALRVLEVSEKGRAALE---AGAESRGQLGARAEETMKAIECLRGLLGEFRGSSSD-----GARSPXXXXXXXXXXXXXXXXXXXXXXXXXATTAA-------YGELARVTQGRLEWLRQRLRAQLSSELAAALRQADPLAAAPGKGAGTVNSRARVPPKMLAATTRLVGLQFGGSPRPNPPSPVGGSVVRRASGGSGGAAGNGDSVWALDGLLEPVAVRFRFHFEGERPTNRVDRPEWFLSFLLRALEAYRPLLLLL-ELPRPAE------GAPELEARE----AGWGGGSVDPLAYFARGLALLARRRLRAQLGAVAADESLLSHTVEEALAFDRCLDREAGYAECPARFPRQTWPRCVEVFAQGEQRFERWMESDAKAAKAKLAEAVASPGAWRAVDWK 560          
BLAST of mRNA_L-elsbetiae_contig707.15875.1 vs. uniprot
Match: A0A4D9D6Y1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6Y1_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.860e-12
Identity = 73/208 (35.10%), Postives = 92/208 (44.23%), Query Frame = 0
Query:  365 PEWFLSFLLRALEAYRPLLLLFSDAARPAPTTSAAAGXXXXEARAGAGASGWEAGGVDP---VAYFARGLTLLARRRLRAQLGAAAADGSLLSHTVEEALAFDRRLDEEAGYAEC--PA------RFPQQTWPRCVEVFAQDEERFELWMTSDANAAEAKLGEAAAAPGAWRAVEWQNGPTPSTPVTPSAVALCRLFWDVAERYRPLR 561
            PEW  +FLLRAL+  +  L   +DA           G    E  A             P   +A+FAR L L ARR++RA L   + +   L+   EEALAFD+ LDEE GY  C  PA         +Q WPR  +V A   +R E W   +A      L     APGAW A         + P T +A A   L   + ERY PLR
Sbjct:  328 PEWVFAFLLRALQLSKSAL---TDA-----RAEECVGKFMPEVSA-----------CMPHPLLAFFARDLALAARRKMRAMLLGGSTEDRALARLGEEALAFDKALDEETGYHRCASPAGVGVVGMVQRQGWPRATDVLAASRQRLERWAEVEAAWVLGSLSRGCEAPGAWDAAPGLE--EQAAPPTRAAQAFAGLVSTLTERYGPLR 514          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig707.15875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBJ7_ECTSI0.000e+061.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXK1_9PHAE7.850e-14861.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNY6_9PHAE2.780e-14253.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9D6Y1_9STRA1.860e-1235.10Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..86
IPR007528RINT-1/Tip20PFAMPF04437RINT1_TIP1coord: 358..575
e-value: 4.0E-21
score: 75.5
IPR007528RINT-1/Tip20PANTHERPTHR13520RAD50-INTERACTING PROTEIN 1 RINT-1coord: 359..1088

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig707contigL-elsbetiae_contig707:9969..26093 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig707.15875.1mRNA_L-elsbetiae_contig707.15875.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig707 9969..26350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig707.15875.1 ID=prot_L-elsbetiae_contig707.15875.1|Name=mRNA_L-elsbetiae_contig707.15875.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1157bp
MNEPRESRDTDAAAGFGPVPSVNEILDGLAVEAGLLPGSFDDTFIPDEDE
AARDVAKAMSAVRPLLERYRHRYEELTSLLARSQASASSATVEARELCRD
HLQTFGRLEDGCTTLAQELGRAAAAAAAAGEKQDVLLSKSKPEFQNECPY
CGGGGVEKEAAARQRRAADAAADADALAARHRSLVQRRRRVRSALRVLEV
SESGRAALETGAAGAERAGGRSARADEAMKAIESLRGLLGEYRVGGGDAP
EHTGTRSPPARPALAVPRQASCVTTAAGGVAGAADGELARVARGRLEWLT
RRLRAHLSSDLAGALRQVDPLAAAAGSGEAQGGGGGGGGGRGGHRGGLGS
GRGATEGRTGSRQGPEWFLSFLLRALEAYRPLLLLFSDAARPAPTTSAAA
GEGGGEARAGAGASGWEAGGVDPVAYFARGLTLLARRRLRAQLGAAAADG
SLLSHTVEEALAFDRRLDEEAGYAECPARFPQQTWPRCVEVFAQDEERFE
LWMTSDANAAEAKLGEAAAAPGAWRAVEWQNGPTPSTPVTPSAVALCRLF
WDVAERYRPLRDPLKQLRFARNIQEPVLRSVRASGEAVGAGPPPSAAAGG
VTSAADGLTATWAAALGAAMLGPAQDADEDKSPIGRWRGYCLAVASCAYV
CAVLRESEDDMLFAEMAEAAAAAVSGAGGEVRDPRTGAASSLGAVGNVVG
VAVGGVSQAVTSVATTAETATAGVVRAVGAQGSIIGPTHAISAALTTLKG
AARLVRKASSSTTSGHHGIGGDTGNGDSAGTGSGSRRPGGGIGGDYGGGA
TAEAEVVMRDGGGGGAAATAGAAAGAAAAAAAATAAVGEWTGSVFGQEAG
RYGIMLEAMVRGAVESCRDGFLWRTRSYLRAWDRGIAVVVPASAAQSSLS
GRGPAAEASGRLGAGVELLETAVGVAGESLPPAQFHKFWTALASELDLTL
VKQIVARRSEMSQDEGLQLWADLQVLMGPFDALARRRPERHFPALAEASV
LLSLEKASTGPLEARGLFGTSQLRSLSSGLDAHGGGVEEAVRGGGWDGWR
EEGGALSPEGTQMRDMLENVGVRRLGPVEASMLLDKRLKGDRLAVLGYLS
AAADTSNDGGRAGIAQGEGGAFGPSVGDRGGGEVVGGGGLAAAAEAPRET
VISSFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007528RINT1_Tip20