prot_L-elsbetiae_contig7062.15867.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7062.15867.1
Unique Nameprot_L-elsbetiae_contig7062.15867.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length402
Homology
BLAST of mRNA_L-elsbetiae_contig7062.15867.1 vs. uniprot
Match: A0A6H5J981_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J981_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 4.290e-62
Identity = 183/390 (46.92%), Postives = 220/390 (56.41%), Query Frame = 0
Query:   15 SSGGLRGALRCTSPRSLFPDHWLLRLMSSRQSPLLRTFTGMVIGALAAFKGPGISRELAEVAAHLMGVVGAEGSEAAGLQALSLLGRLCSGITTERESQAYMEQRGLRGFLAGSVLLEARRLQDQSNAAAQPPPPFSFGR-LDPAAATPAAPRTGELLLRLAEAL---HAVDARPAPVVEGDSREVVAPAVPASXXXXXNHAXXXXXXXXXXXGDADAGTAEG--GGEERRAVSSSPMKDLVLETPPALTEGSGGPGGAAVGGSGAEEQYLDHVLEALVRIRGIVLPRISANNL------------------------SRATEILQRLTGMPPSAGASCPSTSXXXXXXXXXXXXXXXXXXXXXXXXGLTPEARKRAYLRSSVRVLRRNT 374
            S GGL+ A R +S    FP+HWLLRLM+++QSP+LRTF+GMV+GA+AAFKGP  S+E+AEVAAH++GVVGA+GSEAAGLQ LSLLGRLCSG+ T RE+QAYMEQRGL GFLA +VLLE RRLQDQS                D A A P APRTGE LLRLAEAL   HA  +  A +V+GD  +++ PA  A                    G A   T  G   G+   A SS+P     +    A T+G      A V   G  E++LDHVLEA+VR RGI +P                                  ++  QR   +P  AG                    XXXXXXXXXXX  TPEARKRA+LR+SVRVLRRNT
Sbjct: 6960 SGGGLQQA-RFSS----FPEHWLLRLMANKQSPVLRTFSGMVLGAMAAFKGPRRSKEVAEVAAHMVGVVGADGSEAAGLQTLSLLGRLCSGVPTNRETQAYMEQRGLSGFLAAAVLLETRRLQDQSXXXXXXXXXXXXXXPADAATAPPEAPRTGEFLLRLAEALGAVHAASSLSAAMVDGDEWKLLMPADGAPTKAAET------------GGSASDATESGHAAGDNEGASSSTPAAGEKV----AATDGFAAAAAADV--KGTVERHLDHVLEAMVRARGIAMPHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHCSDPQQRSAAVPGPAGXXX-----------------XXXXXXXXXXXXATPEARKRAFLRASVRVLRRNT 7309          
BLAST of mRNA_L-elsbetiae_contig7062.15867.1 vs. uniprot
Match: D8LLX0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX0_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 6.910e-21
Identity = 53/78 (67.95%), Postives = 71/78 (91.03%), Query Frame = 0
Query:   30 SLFPDHWLLRLMSSRQSPLLRTFTGMVIGALAAFKGPGISRELAEVAAHLMGVVGAEGSEAAGLQALSLLGRLCSGIT 107
            S FP+HWLLRLM++++SP+LRTF+GMV+GA+AAFKGP  S+E+AEVAAH++GVVGA+GSEAAGLQ + +L RL +GI+
Sbjct: 6167 SSFPEHWLLRLMANKRSPVLRTFSGMVLGAMAAFKGPRRSKEVAEVAAHMVGVVGADGSEAAGLQVIEILQRL-TGIS 6243          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7062.15867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J981_9PHAE4.290e-6246.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLX0_ECTSI6.910e-2167.95Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7062contigL-elsbetiae_contig7062:1537..3954 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7062.15867.1mRNA_L-elsbetiae_contig7062.15867.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7062 1536..3954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7062.15867.1 ID=prot_L-elsbetiae_contig7062.15867.1|Name=mRNA_L-elsbetiae_contig7062.15867.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=402bp
ASASASASAGAGVGSSGGLRGALRCTSPRSLFPDHWLLRLMSSRQSPLLR
TFTGMVIGALAAFKGPGISRELAEVAAHLMGVVGAEGSEAAGLQALSLLG
RLCSGITTERESQAYMEQRGLRGFLAGSVLLEARRLQDQSNAAAQPPPPF
SFGRLDPAAATPAAPRTGELLLRLAEALHAVDARPAPVVEGDSREVVAPA
VPASPPTPLNHAEVGGAGGAGASGDADAGTAEGGGEERRAVSSSPMKDLV
LETPPALTEGSGGPGGAAVGGSGAEEQYLDHVLEALVRIRGIVLPRISAN
NLSRATEILQRLTGMPPSAGASCPSTSTTSAGTGATGTRAAASAAGGGGG
AGLTPEARKRAYLRSSVRVLRRNTHAPQLSSVAAPPAPQSVVGGGASGGG
GG
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