prot_L-elsbetiae_contig706.15865.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig706.15865.1
Unique Nameprot_L-elsbetiae_contig706.15865.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length109
Homology
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BLAST of mRNA_L-elsbetiae_contig706.15865.1 vs. uniprot
Match: A0A6H5KGG6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGG6_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 6.220e-11
Identity = 50/127 (39.37%), Postives = 66/127 (51.97%), Query Frame = 0 
Query:    1 MASSLCGCWQSWPIRRTNRSEQEVSRGVSRKARRHIVKVRMPES-------------SRSEGGKPSATATEARKSTADTRSAIGLSSNPLEERAKGK-----KQQGRGGGDTGAAAVAVKIRRGGFF 109
            MA++L GCWQ WP+RR  RSE+E SRGVSRK +     +RMP               S S+GG    T++    S A   +  GL ++ + E + G       QQ   G    AAAVAVK+R+GG F
Sbjct:    1 MATTLSGCWQWWPMRRARRSERETSRGVSRKVKSRFTTIRMPAQVSSAGPAGRGRPHSPSDGGGGEETSSV---SCAALGAVAGLETDIIGESSGGAIGRHPSQQKEDGDSQSAAAVAVKVRKGGLF 124
[Close]
BLAST of mRNA_L-elsbetiae_contig706.15865.1 vs. uniprot
Match: D7G9G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G3_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.630e-10
Identity = 50/122 (40.98%), Postives = 62/122 (50.82%), Query Frame = 0 
Query:    1 MASSLCGCWQSWPIRRTNRSEQEVSRGVSRKARRHIVKVRMPESSRSEG----GKP-------SATATEARKSTADTRSAIGLSSNPLEERAKGK--KQQGRGGGDTGAAAVAVKIRRGGFF 109
            MA++  GCW  WP+RR  RSE+E  RGVSRK +     VRMP    S G    GKP       S    ++  S A   +  GL +    E + GK   QQ   G    AAAVAVK+R+GG F
Sbjct:    1 MATTFSGCWPWWPMRRARRSEREAPRGVSRKVKSRFTTVRMPAQVSSAGPAGGGKPHSPCGGGSGGEEKSSASYAAVGAVAGLETGRDGESSGGKHPSQQKDDGDSQPAAAVAVKVRKGGLF 122
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig706.15865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KGG6_9PHAE6.220e-1139.37RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G9G3_ECTSI1.630e-1040.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig706contigL-elsbetiae_contig706:22356..23220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig706.15865.1mRNA_L-elsbetiae_contig706.15865.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig706 22318..23220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig706.15865.1 ID=prot_L-elsbetiae_contig706.15865.1|Name=mRNA_L-elsbetiae_contig706.15865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=109bp
MASSLCGCWQSWPIRRTNRSEQEVSRGVSRKARRHIVKVRMPESSRSEGG
KPSATATEARKSTADTRSAIGLSSNPLEERAKGKKQQGRGGGDTGAAAVA
VKIRRGGFF
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