prot_L-elsbetiae_contig706.15864.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig706.15864.1
Unique Name	prot_L-elsbetiae_contig706.15864.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	596

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: D8LE34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE34_ECTSI)

HSP 1 Score: 520 bits (1338), Expect = 1.370e-174
Identity = 391/689 (56.75%), Postives = 441/689 (64.01%), Query Frame = 0

Query:    3 EMSPDDVCPSGTDNFDSEGLCQPGQENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPASVARNLRSSTISNSAAESEGRLMSLRKRRNRGHISRHDDKQNGLDSSSXXXXXXXXXXXXXXXXXXXXXXXXXDG------------------RYHKKPGMSMMV--------------QQEAPKFTVDGESGSGARG--FIEEE-----------------------TNGSMCAGTGSGWSNRQLVTGSKSDRPSSTKPSKATTAAVGGGAADARALAWEAASVKSHAVGADVTAEEAAXXXXXXXXXXXXXXXXXASGTKRNRSESISSNS---SLGDAIKNLKRTGGS-QGTRISPTSVSDIN-FMSFPVPHTEHSDVAMHHLPQQLAPSWCTKPQDTWMAGAGFDIGA-DSDDAGPFRWFIDERSLSAPGAFFQPPVETWSGSDTTNASISAGATSSGEGSTIDGDRRTIVPE-VPVDTNKIDMSP----VTDDTYDRPNLDDMASKRRCLEPVAPMPIDPQVYVPVSDASIASEVTRHVEADNAAS--------------------GDSLDITSGLWLDHPQET-----SPLMYGLGLSTPPVAG----------LGGNLSLPSLDEDEVLGFLACAENR 588
            ++  DD   S +DN D+EG+CQPG ENTGRWTSDEHRLFL+GLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPASV+RNLRSST++NS AESEGRLMSLRKRR                   XXXXXXXXXXXXXXXXXXXXXXXXX                    R H+       +               +EAP FTV G + SGA G  F EEE                       ++  +  GT   WS R+     KS RPS TK SKA   A       ARALAWE                   XXXXXXXXXXXXXXXXX  GTKR+RSES+SS+S   SLG  IK+LKRTGGS Q TRISPTSV+D+N FMSFPVP TE SD+AMHHLPQQLAPSWCTKPQDTWMAGAG D+G  ++DDAGPFRWFIDERSLSAPGAFFQPPVETWSGSDTT+ S SAG+             RT+VPE +P +TNK+DMSP     +D+T+++ ++  +A  R  +EP+          VP+SDA++ASEV+RHVEAD+A +                    G SLDITSGLWLDHPQE      SPLMYGLGLS P   G            G LSLPSLDE+EVLGFLACAE  
Sbjct:    4 QLQVDDGAASSSDNLDNEGVCQPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDAGKPRPASVSRNLRSSTMANSPAESEGRLMSLRKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGHRGVYRETALGATXXXXXXXXXRQAEEAPAFTVGGGN-SGAHGAEFDEEEAEEELDESVDVEGHNSNNKNVGISSSLLHGGTAGTWSKRRPA---KSHRPSPTKASKAAAIAXXXXXXXARALAWE-------------XXXXXXXXXXXXXXXXXXXXXXXXXGTKRHRSESVSSSSNDASLGKTIKSLKRTGGSSQTTRISPTSVADVNSFMSFPVPQTERSDMAMHHLPQQLAPSWCTKPQDTWMAGAGLDMGGLEADDAGPFRWFIDERSLSAPGAFFQPPVETWSGSDTTDVSTSAGSDHQ--------HHRTVVPEHLPSNTNKVDMSPGGVLTSDNTHNQEDVS-IAKHRGMMEPI----------VPISDAAMASEVSRHVEADSATACAAAXXXXXXXXXXXXXXDGGHSLDITSGLWLDHPQEAHEAVASPLMYGLGLSAPANTGGAXXXXXXXXXXGGLSLPSLDEEEVLGFLACAEEN 656

[Close]

BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: A0A7S0GFF0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFF0_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.320e-21
Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 0

Query:   26 GQENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            G ENTGRWT+DEHRLFL GLELHGKGWK+IA LI++RTVVQIRTHAQKYFQKL+KA+ +G
Sbjct:   40 GSENTGRWTADEHRLFLHGLELHGKGWKKIACLIKSRTVVQIRTHAQKYFQKLAKARQNG 99

[Close]

BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: A0A6U4FI15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FI15_9STRA)

HSP 1 Score: 105 bits (263), Expect = 9.510e-21
Identity = 48/60 (80.00%), Postives = 56/60 (93.33%), Query Frame = 0

Query:   26 GQENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            G+ENTGRW+ +EHRLFLKGLE+HGKGWK+IA LI+TRTVVQIRTHAQKYFQKL+KA+  G
Sbjct:   27 GKENTGRWSYEEHRLFLKGLEMHGKGWKKIAELIKTRTVVQIRTHAQKYFQKLAKAKQGG 86

[Close]

BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: A0A6H5L4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H1_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.040e-20
Identity = 49/61 (80.33%), Postives = 58/61 (95.08%), Query Frame = 0

Query:   25 PGQENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            P +ENTGRWT DEHRLFL+GLELHGKGWK+IA+LI+TRTVVQIRTHAQKYFQK++KA+ +G
Sbjct:  569 PVKENTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNG 629

[Close]

BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: K0S452_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S452_THAOC)

HSP 1 Score: 105 bits (261), Expect = 1.130e-20
Identity = 48/58 (82.76%), Postives = 56/58 (96.55%), Query Frame = 0

Query:   28 ENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            ENTGRWT++EHRLFL+GLE HGKGWK+IATLI++RTVVQIRTHAQKYFQKL+KA+ SG
Sbjct:  308 ENTGRWTAEEHRLFLQGLERHGKGWKKIATLIKSRTVVQIRTHAQKYFQKLAKARQSG 365

[Close]

BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: A0A8J9S9N3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9N3_PHATR)

HSP 1 Score: 102 bits (254), Expect = 1.730e-20
Identity = 46/58 (79.31%), Postives = 56/58 (96.55%), Query Frame = 0

Query:   28 ENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            ENTGRWT++EHRLFL+GLE HGKGWK+IA+LI++RTVVQIRTHAQKYFQKL+KA+ +G
Sbjct:  115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNG 172

[Close]

BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: D7G656_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G656_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.800e-20
Identity = 47/58 (81.03%), Postives = 56/58 (96.55%), Query Frame = 0

Query:   28 ENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            +NTGRWT DEHRLFL+GLELHGKGWK+IA+LI+TRTVVQIRTHAQKYFQK++KA+ +G
Sbjct:    4 KNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNG 61

[Close]

BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: A0A7S2FCS8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FCS8_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.100e-20
Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 0

Query:   25 PGQENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            P +ENTGRWT +EH +FL GL++HGKGWK IA +I+TRTVVQIRTHAQKYFQKL+KAQ +G
Sbjct:  119 PNKENTGRWTIEEHTMFLDGLKVHGKGWKDIAKMIKTRTVVQIRTHAQKYFQKLAKAQQNG 179

[Close]

BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: W7TWM0_9STRA (SANT/Myb domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWM0_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.170e-20
Identity = 49/64 (76.56%), Postives = 58/64 (90.62%), Query Frame = 0

Query:   22 LCQPGQENTGRWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            L + G+ENTGRWT +EH LFLKGLE+HGKGWK+IA LI+TRTVVQIRTHAQKYFQKL+KA+ +G
Sbjct:   92 LGETGRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNG 155

[Close]

BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Match: A0A1E7FR15_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR15_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.450e-20
Identity = 43/54 (79.63%), Postives = 51/54 (94.44%), Query Frame = 0

Query:   32 RWTSDEHRLFLKGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 85
            RWTS+EH LFL+GLELHGKGWK+IA LI++RTVVQIRTHAQKYFQKL+KA+ +G
Sbjct:    1 RWTSEEHNLFLQGLELHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKAKQNG 54

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig706.15864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LE34_ECTSI	1.370e-174	56.75	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S0GFF0_9STRA	8.320e-21	81.67	Hypothetical protein n=1 Tax=Proboscia inermis Tax...	[more]
A0A6U4FI15_9STRA	9.510e-21	80.00	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A6H5L4H1_9PHAE	1.040e-20	80.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
K0S452_THAOC	1.130e-20	82.76	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A8J9S9N3_PHATR	1.730e-20	79.31	Hypothetical protein (Fragment) n=1 Tax=Phaeodacty...	[more]
D7G656_ECTSI	1.800e-20	81.03	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2FCS8_9STRA	2.100e-20	73.77	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
W7TWM0_9STRA	2.170e-20	76.56	SANT/Myb domain protein n=2 Tax=Monodopsidaceae Ta...	[more]
A0A1E7FR15_9STRA	2.450e-20	79.63	Uncharacterized protein (Fragment) n=1 Tax=Fragila...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 29..77 e-value: 2.2E-11 score: 53.8
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 30..74 e-value: 6.9E-12 score: 45.4
None	No IPR available	GENE3D	1.10.10.60		coord: 32..79 e-value: 1.3E-16 score: 62.4
None	No IPR available	PANTHER	PTHR12802:SF20	MPN DOMAIN-CONTAINING PROTEIN CG4751	coord: 31..379
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 31..379
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 32..77 e-value: 5.1E-11 score: 40.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 29..79 score: 15.05
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 27..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig706	contig	L-elsbetiae_contig706:15541..20582 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig706.15864.1	mRNA_L-elsbetiae_contig706.15864.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig706 15302..20892 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig706.15864.1 ID=prot_L-elsbetiae_contig706.15864.1|Name=mRNA_L-elsbetiae_contig706.15864.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=596bp
MGEMSPDDVCPSGTDNFDSEGLCQPGQENTGRWTSDEHRLFLKGLELHGK
GWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTSHLDPATLMSTMDA
GKPRPASVARNLRSSTISNSAAESEGRLMSLRKRRNRGHISRHDDKQNGL
DSSSDGSSGGGSSESDGSSEEEEEEVGGGDGRYHKKPGMSMMVQQEAPKF
TVDGESGSGARGFIEEETNGSMCAGTGSGWSNRQLVTGSKSDRPSSTKPS
KATTAAVGGGAADARALAWEAASVKSHAVGADVTAEEAAAAAAGAVAAAA
SVAAGNASGTKRNRSESISSNSSLGDAIKNLKRTGGSQGTRISPTSVSDI
NFMSFPVPHTEHSDVAMHHLPQQLAPSWCTKPQDTWMAGAGFDIGADSDD
AGPFRWFIDERSLSAPGAFFQPPVETWSGSDTTNASISAGATSSGEGSTI
DGDRRTIVPEVPVDTNKIDMSPVTDDTYDRPNLDDMASKRRCLEPVAPMP
IDPQVYVPVSDASIASEVTRHVEADNAASGDSLDITSGLWLDHPQETSPL
MYGLGLSTPPVAGLGGNLSLPSLDEDEVLGFLACAENRPAGEVEI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf