prot_L-elsbetiae_contig7058.15860.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7058.15860.1
Unique Nameprot_L-elsbetiae_contig7058.15860.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length505
Homology
BLAST of mRNA_L-elsbetiae_contig7058.15860.1 vs. uniprot
Match: D8LKP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP8_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 5.670e-87
Identity = 338/517 (65.38%), Postives = 365/517 (70.60%), Query Frame = 0
Query:   10 RGSTSAQMAEKSIEEEMESFRQYQNTMLSREEMASIRQKVQDAFSQIYSASPTYAAAGGRSGGSLIVSKVGAAVPTRKAAMEIEAGGGVDVREGQASAITEIWSKVQIKGGGDNPHA---------LRTGVGTRSLAAAVAGXXXXXXXXASLNRQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNSWSQQLDQLRTDDVIPTPLEINSPGGAGDILSLSCLGSYLADVKLPSGLDGVGPDGT--HATFPATDGRDKRGGSGSGSGTVGXXXXXXXXXXXXXXXXXXEENIGGAQVGAARNGT----RSXXXXXXXXXXXXSDWSRRALPPHSSAATGNXXXXXXXXXXXXXXXXX-------RLGRMDIVTDGCSSXXXXXXXXXXXXGGIRGGGAVLFDANAATLQHTMQALSIDDEPSPGWSQLRTDVAGAPGPAFDGDALPMSLTSASDNLLGGAQGFPVPPSLK 504
            R S +  MA+K IEEEME+FRQ+Q  M++  +  S++QK ++AFSQ+YS+ P  AA+     G   +SK GAAVPTRKAAMEIEAGGGVDVREGQASAITEIWSKV+IK G   P +         +R GVGTRSLAAA      XXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +RNSWSQQLDQLRTDDVIPTPLEI+SPGG GDILSLSCLGSYLADVKLPS LDG G DGT    TF AT  R+KR G         XXXXXXXXXXXXXXXXXX                    +              +W RR            XXXXXXXXXXXXX           RLGRM+IVT G   XXXXXXXXXXXX         LFDA+AA LQH MQALSIDDEPSPGWSQLRTDVAG PGPAFDGDALPMSLTSASDN+LGGAQGFPVPP+ K
Sbjct:  620 RDSAAMSMAKKCIEEEMETFRQFQQVMIAGGDTKSVQQKEREAFSQLYSSLPALAAS---QDGGPAMSKAGAAVPTRKAAMEIEAGGGVDVREGQASAITEIWSKVEIKEGEAPPQSPALLGGAPMMRQGVGTRSLAAAXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIGGSRNSWSQQLDQLRTDDVIPTPLEIHSPGGGGDILSLSCLGSYLADVKLPSNLDGAGGDGTGQQGTFSATAAREKRSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQMSDPSKGTFTSSGEWRRRXXXXXXXXXXXXXXXXXXXXXXXXXDVKRHAPDSSQRLGRMNIVT-GDGXXXXXXXXXXXXXXXXXXXXXALFDAHAAALQHDMQALSIDDEPSPGWSQLRTDVAGVPGPAFDGDALPMSLTSASDNVLGGAQGFPVPPAFK 1128          
BLAST of mRNA_L-elsbetiae_contig7058.15860.1 vs. uniprot
Match: A0A6H5KU69_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU69_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 3.460e-80
Identity = 308/517 (59.57%), Postives = 329/517 (63.64%), Query Frame = 0
Query:    8 GGRGSTSAQMAEKSIEEEMESFRQYQNTMLSREEMASIRQKVQDAFSQIYSASPTYAAAGGRSGGSLIVSKVGAAVPTRKAAMEIEAGGGVDVREGQASAITEIWSKVQIKGG---GDNPHA------LRTGVGTRSLAAAVAGXXXXXXXXASLNRQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNSWSQQLDQLRTDDVIPTPLEINSPGGAGDILSLSCLGSYLADVKLPSGLDGVGPDGT--HATFPATDGRDKRGGSGSGSGTVGXXXXXXXXXXXXXXXXXXEENIGGAQVGAARNGTRSXXXXXXXXXXXXS--DWSRRALPPHSSAATGNXXXXXXXXXXXXXXXXX-------RLGRMDIVTDGCSSXXXXXXXXXXXXGGIRGGGAVLFDANAATLQHTMQALSIDDEPSPGWSQLRTDVAGAPGPAFDGDALPMSLTSASDNLLGGAQGFPVPPSLK 504
            G R S +  MA+K IEEE E                        AFSQ+YS+ P  AA  G+ GG L +SK GAAVPTRKAAMEI AGGGVDVREGQASAITEIWSKV+IK G     +P        +R GVGTRSLAAAV  XXXXXXXX SLN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                  +RNSWSQQLDQLRTDDVIPTPLEI+SP G GDILSLSCLGSYLADVKLPS LDG G DGT    TF AT   +KR G GSG     XXXXXXXXXXXXXXXXXX                  XX          S  +WSRR  PP+++     XXXXXXXXX               RLGR++IVT G   XXXXXXXXXXXX         L DA+AA LQH MQALSIDDE SPGWSQLRTDVAG PGPAFDGDALPMSLTSASDN+LGGAQGFPVP + K
Sbjct:  494 GDRDSAAISMAKKCIEEERE------------------------AFSQLYSSLPALAA--GQDGG-LAMSKAGAAVPTRKAAMEIGAGGGVDVREGQASAITEIWSKVEIKEGEAPSQSPALPGVAPMMRQGVGTRSLAAAVXXXXXXXXXXVSLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIGG------------------------------SRNSWSQQLDQLRTDDVIPTPLEIHSPDGGGDILSLSCLGSYLADVKLPSNLDGAGGDGTGQQDTFSATAAGEKRSGGGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPDPSKGTSTSSGEWSRRNRPPNTAPTPAXXXXXXXXXXDNGGDVKRHAPDSNQRLGRLNIVT-GXXXXXXXXXXXXXXXXXXXXXXXXLLDAHAAALQHDMQALSIDDETSPGWSQLRTDVAGVPGPAFDGDALPMSLTSASDNVLGGAQGFPVPAAFK 952          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7058.15860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKP8_ECTSI5.670e-8765.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU69_9PHAE3.460e-8059.57MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7058contigL-elsbetiae_contig7058:341..5185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7058.15860.1mRNA_L-elsbetiae_contig7058.15860.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7058 341..10119 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7058.15860.1 ID=prot_L-elsbetiae_contig7058.15860.1|Name=mRNA_L-elsbetiae_contig7058.15860.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=505bp
MRGAPQDGGRGSTSAQMAEKSIEEEMESFRQYQNTMLSREEMASIRQKVQ
DAFSQIYSASPTYAAAGGRSGGSLIVSKVGAAVPTRKAAMEIEAGGGVDV
REGQASAITEIWSKVQIKGGGDNPHALRTGVGTRSLAAAVAGAAGGGGPY
ASLNRQSHPRNGGGNSNDNSGSGGGGGGGYGNASYYGNNPRGGGGGGASG
GGGFGGGGGGGAGGEGAAVAAAACAASSAGGARNSWSQQLDQLRTDDVIP
TPLEINSPGGAGDILSLSCLGSYLADVKLPSGLDGVGPDGTHATFPATDG
RDKRGGSGSGSGTVGGGGAGTGGGSGGGGGGGGEENIGGAQVGAARNGTR
SSGGGGGGGGSPPSDWSRRALPPHSSAATGNTGGSGSGGGGGGGGSGGRL
GRMDIVTDGCSSGGGGGGGSGGGRGGIRGGGAVLFDANAATLQHTMQALS
IDDEPSPGWSQLRTDVAGAPGPAFDGDALPMSLTSASDNLLGGAQGFPVP
PSLK*
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