prot_L-elsbetiae_contig7020.15823.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7020.15823.1
Unique Nameprot_L-elsbetiae_contig7020.15823.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length79
Homology
BLAST of mRNA_L-elsbetiae_contig7020.15823.1 vs. uniprot
Match: D8LS34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS34_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 3.610e-41
Identity = 69/74 (93.24%), Postives = 73/74 (98.65%), Query Frame = 0
Query:    5 QALFGFNPGVTVLIEFDHIDKRPTKPATPGDRRASEALPIFEGSEPVTGTATVLVAPGKKVDHLGIKAELIGQI 78
            QALFGFNPGVT+L+EFDHIDKRPTKP+TPGDRRASEALPIFEGSE V+GTATVLVAPGKKVDHLGIKAELIGQI
Sbjct:    2 QALFGFNPGVTILVEFDHIDKRPTKPSTPGDRRASEALPIFEGSEAVSGTATVLVAPGKKVDHLGIKAELIGQI 75          
BLAST of mRNA_L-elsbetiae_contig7020.15823.1 vs. uniprot
Match: A0A836CB39_9STRA (Vacuolar protein sorting-associated protein 26-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB39_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.410e-25
Identity = 47/73 (64.38%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    6 ALFGFNPGVTVLIEFDHIDKRPTKPATPGDRRASEALPIFEGSEPVTGTATVLVAPGKKVDHLGIKAELIGQI 78
            A FG  PG TVL+EFD  ++RP++   PGD++A E +PIF GSEPV+G  TVLVAPGKKVDH+GIK E+IGQI
Sbjct:    2 AWFGLQPGATVLLEFDGAERRPSRAPPPGDKKALERVPIFVGSEPVSGAVTVLVAPGKKVDHMGIKVEMIGQI 74          
BLAST of mRNA_L-elsbetiae_contig7020.15823.1 vs. uniprot
Match: A0A7S2UYV3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYV3_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.180e-9
Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 0
Query:    6 ALFGFNPGVTVLIEFDHIDKRPTKPATPGDRRASEALPIFEGSEPVTGTATVLVAPGKKVDHLGIKAELIGQI 78
            +LFGF P   + ++F     R  K      ++ S+ L IF G E V+GT  V++ PGK+++H GIK E+IGQI
Sbjct:    2 SLFGFGPAAEIRLDFADSATRTRKAVGAVGQKDSKQLLIFHGEEAVSGTVDVVLPPGKRLEHQGIKVEMIGQI 74          
BLAST of mRNA_L-elsbetiae_contig7020.15823.1 vs. uniprot
Match: A0A5J4XEX0_9CHLO (Subunit of retromer complex n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XEX0_9CHLO)

HSP 1 Score: 62.4 bits (150), Expect = 1.330e-9
Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 0
Query:    1 MILQQALFG---FNPGVTVLIEFDHIDKRPTKPAT-PGDRRASEALPIFEGSEPVTGTATVLVAPGKKVDHLGIKAELIGQI 78
            M LQ+ LFG        TV +EF   D++P K A+  G    +E LP++   + V G   V   PGKKV+H GIK +L+GQI
Sbjct:    1 MFLQKGLFGGLTLGTNATVQLEFRRADRKPVKAASIKGKGSETEQLPLYTNKDSVVGEIRVANTPGKKVEHQGIKVQLLGQI 82          
BLAST of mRNA_L-elsbetiae_contig7020.15823.1 vs. uniprot
Match: A0A7S2C2A7_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C2A7_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 8.060e-9
Identity = 31/70 (44.29%), Postives = 39/70 (55.71%), Query Frame = 0
Query:    8 FGFNPGVTVLIEFDHIDKRPTKPATPGDRRASEALPIFEGSEPVTGTATVLVAPGKKVDHLGIKAELIGQ 77
            FG      + I FD    RPTK    G       LPIF+  EP TG+  V V PGKK++H+GIK E++GQ
Sbjct:    7 FGSKSSDRIAISFDGGANRPTKRTGTGPTEV--VLPIFDNKEPFTGSVEVRVDPGKKLEHMGIKIEMVGQ 74          
BLAST of mRNA_L-elsbetiae_contig7020.15823.1 vs. uniprot
Match: A0A7S1CEN8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEN8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.510e-8
Identity = 27/73 (36.99%), Postives = 44/73 (60.27%), Query Frame = 0
Query:    6 ALFGFNPGVTVLIEFDHIDKRPTKPATPGDRRASEALPIFEGSEPVTGTATVLVAPGKKVDHLGIKAELIGQI 78
            ++FGF P  T+ IE +  +KR  +     D      +P+F+ +E V+G  T++V   KK++H+GIK EL+G I
Sbjct:    2 SIFGFGPSATIDIELNGAEKRAMRRQETLDGTEGVDVPVFQDTEDVSGKVTLVVPGSKKLEHIGIKVELLGHI 74          
BLAST of mRNA_L-elsbetiae_contig7020.15823.1 vs. uniprot
Match: A0A0G4EAR0_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EAR0_VITBC)

HSP 1 Score: 58.5 bits (140), Expect = 2.880e-8
Identity = 30/69 (43.48%), Postives = 44/69 (63.77%), Query Frame = 0
Query:   10 FNPGVTVLIEFDHIDKRPTKPATPGDRRASEALPIFEGSEPVTGTATVLVAPGKKVDHLGIKAELIGQI 78
            F  G ++ ++FDH  +R   P    DR+  +AL I+   E V+G+A V + PGKK+DH G+K ELIGQ+
Sbjct:    8 FGSGCSLEVQFDHEPQRKMAPLG-RDRKGEKAL-IYSDGEDVSGSAMVSMKPGKKIDHQGVKIELIGQV 74          
BLAST of mRNA_L-elsbetiae_contig7020.15823.1 vs. uniprot
Match: I0Z698_COCSC (Vacuolar protein sorting-associated protein 26 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z698_COCSC)

HSP 1 Score: 57.8 bits (138), Expect = 5.980e-8
Identity = 31/71 (43.66%), Postives = 40/71 (56.34%), Query Frame = 0
Query:    9 GFNPGVTVLIEFDHIDKRPTKPAT-PGDRRASEALPIFEGSEPVTGTATVLVAPGKKVDHLGIKAELIGQI 78
            G   G TV +EF + D  P K AT       +E LP+F   + +TG   V   PGKK++H GIK +LIGQI
Sbjct:    9 GLGQGGTVQLEFKNDDGAPVKTATVKAGGGETETLPLFTNKDTITGEVKVANIPGKKLEHQGIKVQLIGQI 79          
BLAST of mRNA_L-elsbetiae_contig7020.15823.1 vs. uniprot
Match: A0A7S0L8Y1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L8Y1_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 1.740e-7
Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 0
Query:   16 VLIEFDHIDKRPTKPATPGDRRASEALPIFEGSEPVTGTATVLVAPGKKVDHLGIKAELIGQI 78
            ++I+FD+ D      +   + + SE L +F+G + V GT  V + PGKK+DH GIK ELIGQI
Sbjct:    1 IVIKFDNEDSMQMV-SMKNEHKDSEQLCLFQGKDTVGGTVEVNIKPGKKIDHTGIKIELIGQI 62          
BLAST of mRNA_L-elsbetiae_contig7020.15823.1 vs. uniprot
Match: W7TAJ9_9STRA (Vacuolar protein sorting-associated protein 26 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAJ9_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 3.710e-7
Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 0
Query:    6 ALFGF---NPGVTVLIEFDHIDKRPTKPATPGDRRASEALPIFEGSEPVTGTATVLVAPGKKVDHLGIKAELIGQI 78
            +LFG     P   V I+   ID+R  K  + G R  +  LP+++  E V G   V++APGKK++HLGIK EL+G I
Sbjct:    2 SLFGNLVGGPQARVNIKLTGIDQRMKKEMSSG-RGTTHLLPLYQAHEGVGGIVEVILAPGKKLEHLGIKIELVGAI 76          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7020.15823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS34_ECTSI3.610e-4193.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CB39_9STRA4.410e-2564.38Vacuolar protein sorting-associated protein 26-dom... [more]
A0A7S2UYV3_9STRA1.180e-941.10Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A5J4XEX0_9CHLO1.330e-941.46Subunit of retromer complex n=1 Tax=Trebouxia sp. ... [more]
A0A7S2C2A7_9STRA8.060e-944.29Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S1CEN8_9STRA1.510e-836.99Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A0G4EAR0_VITBC2.880e-843.48Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
I0Z698_COCSC5.980e-843.66Vacuolar protein sorting-associated protein 26 n=2... [more]
A0A7S0L8Y1_9EUKA1.740e-744.44Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
W7TAJ9_9STRA3.710e-742.11Vacuolar protein sorting-associated protein 26 n=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014752Arrestin, C-terminalGENE3D2.60.40.640coord: 4..79
e-value: 4.8E-11
score: 44.3
IPR028934Vacuolar protein sorting protein 26 relatedPFAMPF03643Vps26coord: 10..78
e-value: 1.2E-8
score: 34.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7020contigL-elsbetiae_contig7020:4720..5561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7020.15823.1mRNA_L-elsbetiae_contig7020.15823.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7020 4720..5561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7020.15823.1 ID=prot_L-elsbetiae_contig7020.15823.1|Name=mRNA_L-elsbetiae_contig7020.15823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=79bp
MILQQALFGFNPGVTVLIEFDHIDKRPTKPATPGDRRASEALPIFEGSEP
VTGTATVLVAPGKKVDHLGIKAELIGQIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014752Arrestin_C
IPR028934Vps26-related