prot_L-elsbetiae_contig7015.15815.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7015.15815.1
Unique Nameprot_L-elsbetiae_contig7015.15815.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length270
Homology
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: D7FHF8_ECTSI (Ribonuclease HI n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF8_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 4.780e-85
Identity = 163/285 (57.19%), Postives = 200/285 (70.18%), Query Frame = 0
Query:    4 MASGLSRTAISRMRVAELKQELANRGLESDGIRPVLQARLGQAAEIERAQSVISRARQRPSSRSETRPAELGSIAGAPPRLARYTNLSKQTGRGAF-----SQGARSMSTSS--PGPPRSSMHVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYK------------------VSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMDTETSTASTHPSF 263
            M + +SRTAI++MRVAEL++ELA+RGL++ GIRPVLQ RL +A E E AQ+VI R+RQR  S +   P   G+   APP  AR    + Q  R         Q  R +STSS  PG  RS+ H++QFDGGSRGNPGPSG GAVLYRLD  G R EVWS SVW+G+ RTNNEAEY GLIEGL AA++LG+K+L+VEGDSKLVIQQMLGNYK                  V+SPKM PLF++A  ++K+FD LE+ HI RA N RAD LAN+AMDTETS++ TH S+
Sbjct:   64 MGAAISRTAIAKMRVAELREELASRGLDNTGIRPVLQGRLIEAKETEWAQAVIDRSRQRERSNTTEPPRAAGTT--APPGPARSQVATSQAARTPSPRIRQQQQQRGISTSSTKPGRQRSTTHLLQFDGGSRGNPGPSGCGAVLYRLDESGEREEVWSSSVWIGEKRTNNEAEYRGLIEGLIAAEKLGIKRLSVEGDSKLVIQQMLGNYKGKQGKTERGGVGGGRGGGVTSPKMQPLFREATTISKAFDALELGHIMRAHNERADDLANIAMDTETSSSCTHRSY 346          
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A7S2KCF7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF7_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.030e-35
Identity = 69/133 (51.88%), Postives = 91/133 (68.42%), Query Frame = 0
Query:  119 HVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMD 251
            +V+QFDGGSRGNPG +GAG VLY   G     EVW G  ++G+  TNNEAEY+GL+ GL+ A+ +GV  + V+GDS+L+++Q+ G YK  S K+ P F   K L K F+  E++HI R  N RAD LAN AMD
Sbjct:   11 YVLQFDGGSRGNPGTAGAGMVLYDEVG----HEVWHGRHYLGEHSTNNEAEYTGLLAGLKCARAIGVSNIVVQGDSELIVKQLQGKYKCKSSKLIPYFTSVKSLIKGFNSFEVRHIPREQNFRADELANEAMD 139          
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A7S2ULA3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULA3_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.400e-33
Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 0
Query:  119 HVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMDTETS 255
            +VM+FDGGSRGNPG +G G VLY  D G   +EVW+G  ++ +  TNNEAEY GL+ GL+ A+ +GV+ + V+GDS+L++ Q+ G YKV S  + PLF+    L + F   E+ HI R  NGRAD LAN AMD +TS
Sbjct:   78 YVMRFDGGSRGNPGIAGCGMVLYDADTG---MEVWTGRQYL-ETATNNEAEYKGLLLGLQCARSMGVENIVVQGDSQLIVYQIEGKYKVKSKNLIPLFRAVMDLKRQFSFFEIGHIYRDKNGRADELANEAMDHKTS 210          
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6T8JIG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JIG0_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.600e-33
Identity = 68/136 (50.00%), Postives = 91/136 (66.91%), Query Frame = 0
Query:  121 MQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMDTETST 256
            +QFDGGSRGNPG SGAG V+Y         EVW+GS  + +  TNNEAEY+ L++GL+ A+ LG++ LAV+GDS L++ Q+ G YKV S  + P  + A  L  +F   E+ HI R  NGRAD LAN+AMD+ + T
Sbjct:   39 LQFDGGSRGNPGLSGAGMVIYNDK----SQEVWNGSYLLPKEATNNEAEYTALVKGLQHARRLGIRHLAVQGDSNLIVMQITGRYKVKSQHLKPFHRDAVELRSAFSTFEISHIPREENGRADELANIAMDSASCT 170          
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6C0DKZ1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DKZ1_9ZZZZ)

HSP 1 Score: 127 bits (318), Expect = 7.530e-33
Identity = 67/132 (50.76%), Postives = 91/132 (68.94%), Query Frame = 0
Query:  119 HVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAM 250
            + ++FDG S+GNPGP+GAGAV+Y+ D      E+W+ S +VG   TNN AEY GLI GL  A ELG+K+L V GDS+L+I+QM G YKV S  +   + KAK L++ FD ++ +HI R  N RAD LAN+ +
Sbjct:   28 YCLKFDGCSKGNPGPAGAGAVIYKND-----QEIWANSKYVGDKETNNVAEYHGLIMGLSRANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEHYLKAKTLSRLFDNIKYEHIYRKDNTRADELANLGL 154          
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6C0DSN1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DSN1_9ZZZZ)

HSP 1 Score: 126 bits (317), Expect = 1.090e-32
Identity = 67/139 (48.20%), Postives = 95/139 (68.35%), Query Frame = 0
Query:  119 HVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMDTETSTA 257
            + ++FDG S+GNPGP+GAGAV+Y+ D      E+W+ SV+VG   TNN AEY+GLI GL  A ELG+K+L V GDS+L+I+QM G YKV S  +   + KAK L++   ++  +HI R  N RAD LAN  + ++ S++
Sbjct:   27 YCLKFDGCSKGNPGPAGAGAVIYKND-----EEIWANSVYVGDKETNNVAEYNGLIMGLTKANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEYYLKAKTLSRFLSEVHYEHIYRKDNTRADELANFGLQSKLSSS 160          
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6C0ESY5_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ESY5_9ZZZZ)

HSP 1 Score: 125 bits (314), Expect = 3.060e-32
Identity = 71/138 (51.45%), Postives = 94/138 (68.12%), Query Frame = 0
Query:  113 PPRSSMHVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAM 250
            P  SS   +QFDG S+GNPG SGAGAV+Y  D      E+W  S++VG+  TNN AEYSGLI GL+ A EL +K++ VEGDS LVI+QM G+YKV S  +  L ++A  L ++FD ++  HI R  N RAD L+N+A+
Sbjct:   23 PEISSGFRLQFDGCSKGNPGISGAGAVIYNFD-----EEIWWDSLFVGENTTNNYAEYSGLILGLKKAIELDIKEIIVEGDSTLVIKQMKGDYKVYSENLQDLHREALKLCENFDSIQFTHIYRINNKRADYLSNLAI 155          
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6C0ETC3_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ETC3_9ZZZZ)

HSP 1 Score: 125 bits (315), Expect = 3.340e-32
Identity = 67/133 (50.38%), Postives = 88/133 (66.17%), Query Frame = 0
Query:  118 MHVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAM 250
             H + FDG S+GNPGP+GAGAV+Y+        E+WS S++VG   TNN AEY+GLI GL  A    +K+L V+GDS LVI+QM G YKV+S  M  L++ AKG  K FDK+  +H+ R  N RAD L+N  +
Sbjct:   41 QHTLFFDGCSKGNPGPAGAGAVIYQ-----GNTEIWSKSLFVGNNSTNNVAEYTGLIIGLHEAVNKKIKELIVKGDSMLVIKQMKGEYKVNSKDMLRLYENAKGFEKYFDKIVYEHVYRDHNKRADQLSNEGL 168          
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6C0F3V1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F3V1_9ZZZZ)

HSP 1 Score: 125 bits (313), Expect = 4.190e-32
Identity = 68/136 (50.00%), Postives = 91/136 (66.91%), Query Frame = 0
Query:  118 MHVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAMDTE 253
            ++ + FDG S+GNPG  GAGAV+Y+      + E+W+G+ +VG   TNN AEYSGLI GL+ A +L +K L V GDS LVI+QM   YKV SP + PL+ +A   AK+FDK+E  H+ R  N RAD L+N  +D E
Sbjct:   25 IYTLNFDGCSKGNPGRGGAGAVIYK-----DQEEIWAGATFVGANVTNNYAEYSGLILGLKTAIKLKIKNLDVLGDSDLVIKQMKKIYKVKSPNIYPLYLEANDTAKAFDKIEFTHVYRENNKRADELSNDGLDLE 155          
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Match: A0A6C0JZJ6_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JZJ6_9ZZZZ)

HSP 1 Score: 125 bits (313), Expect = 1.160e-31
Identity = 63/132 (47.73%), Postives = 91/132 (68.94%), Query Frame = 0
Query:  119 HVMQFDGGSRGNPGPSGAGAVLYRLDGGGARVEVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQMLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAM 250
            + M FDG S+GNPGP+GAGAV+Y  +     VE+WS +++VG   TNN AEY+G++ GL  A    ++ L V+GDS++VI+QMLG YKV S  +  ++++AK L K FDK++  H+ R LN RAD L+N  +
Sbjct:   62 YCMMFDGCSKGNPGPAGAGAVIYANN-----VEIWSRAIFVGNRETNNLAEYTGMLLGLNEAVRRNIRVLTVKGDSEVVIKQMLGKYKVKSENLLDIYEQAKDLEKHFDKIDYIHVYRHLNARADALSNEGL 188          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7015.15815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF8_ECTSI4.780e-8557.19Ribonuclease HI n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A7S2KCF7_9STRA1.030e-3551.88Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2ULA3_9STRA2.400e-3351.09Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6T8JIG0_9STRA2.600e-3350.00Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A6C0DKZ1_9ZZZZ7.530e-3350.76RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0DSN1_9ZZZZ1.090e-3248.20RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0ESY5_9ZZZZ3.060e-3251.45RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0ETC3_9ZZZZ3.340e-3250.38RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0F3V1_9ZZZZ4.190e-3250.00RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0JZJ6_9ZZZZ1.160e-3147.73RNase H type-1 domain-containing protein n=1 Tax=v... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 13..47
e-value: 1.3E-6
score: 38.0
IPR003034SAP domainPFAMPF02037SAPcoord: 13..43
e-value: 3.9E-8
score: 32.9
IPR003034SAP domainPROSITEPS50800SAPcoord: 13..47
score: 9.906
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 123..248
e-value: 1.0E-23
score: 83.5
IPR002156Ribonuclease H domainPROSITEPS50879RNASE_Hcoord: 115..251
score: 10.974
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 119..259
e-value: 5.6E-36
score: 125.6
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 2..64
e-value: 5.3E-8
score: 34.3
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 12..49
NoneNo IPR availablePANTHERPTHR46387:SF2POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEINcoord: 94..256
NoneNo IPR availablePANTHERPTHR46387FAMILY NOT NAMEDcoord: 94..256
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 118..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7015contigL-elsbetiae_contig7015:4924..9136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7015.15815.1mRNA_L-elsbetiae_contig7015.15815.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7015 4403..9169 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7015.15815.1 ID=prot_L-elsbetiae_contig7015.15815.1|Name=mRNA_L-elsbetiae_contig7015.15815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=270bp
MASMASGLSRTAISRMRVAELKQELANRGLESDGIRPVLQARLGQAAEIE
RAQSVISRARQRPSSRSETRPAELGSIAGAPPRLARYTNLSKQTGRGAFS
QGARSMSTSSPGPPRSSMHVMQFDGGSRGNPGPSGAGAVLYRLDGGGARV
EVWSGSVWVGQGRTNNEAEYSGLIEGLRAAKELGVKKLAVEGDSKLVIQQ
MLGNYKVSSPKMAPLFKKAKGLAKSFDKLEMQHIERALNGRADTLANVAM
DTETSTASTHPSFGDSDER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR002156RNaseH_domain
IPR036397RNaseH_sf
IPR036361SAP_dom_sf
IPR012337RNaseH-like_sf