prot_L-elsbetiae_contig701.15808.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig701.15808.1
Unique Nameprot_L-elsbetiae_contig701.15808.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length368
Homology
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BLAST of mRNA_L-elsbetiae_contig701.15808.1 vs. uniprot
Match: D8LLS0_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS0_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 2.450e-79
Identity = 191/382 (50.00%), Postives = 230/382 (60.21%), Query Frame = 0 
Query:    1 MDSDGDGRLTLAELGAALRRTGARLSLSQITALFRHFDEG-LGLDTVGRGQFLWEFVDSKRLLEQWREAGDVRGGHSARTAPFRNRAKKTSYGGG---RSGG-DDGTLSRYDVLRSLEELGVHVDGWEADALLDRFTV------GDGS---DN-VDWVXXXXXXXXXXXXXXXXXXXXXXXXXXPSSGSKSAAKARGE-RAGLRTSLPRHSR------QQQRHWATSGFHRGGGLFE-GEGNVT-----AQGRPTRSTETATATTGGKPYYHWASSAPSSAGGWRKEDTVGSETAPTARTKARTRTGSADRGSSSEAVMERSSPPP-SLRLGVPRGRRGGSGGG---LVRNVAEASILLDGLLEDQQELEAFLEEEIAKRER 350
            MD+DG GRLTLAE+GAAL+R GA LSLSQ+TALFRHF  G LGLD V RG+ LWEF+D+KRLLEQWR AGD+ GGH ARTAPFR RA + SY GG   R GG   GTLSRYD  R+LEELGVHVDGWEA AL+DRF +      GD +   DN VDW                               +K+A ++  E RAGLRT+LPR  +      +QQ+ WATSG HRGGGLFE G+G+ T            S+  A+AT G KPY +WASSAP S G +    +   + AP A T     T +  RG+    +    SP       G  R R+GG   G   ++ N AEAS +LD LLED++ELEAFLEEE A+RER
Sbjct:  983 MDADGGGRLTLAEMGAALKRVGAHLSLSQVTALFRHFRRGRLGLDKVDRGEILWEFIDTKRLLEQWRSAGDIGGGHRARTAPFRKRANRASYSGGDDGRGGGASGGTLSRYDFSRALEELGVHVDGWEAGALMDRFGLEKDELFGDDANPEDNEVDWRTFVSFMQTVEREEDGKDDDDKNKRNHYGGRNKTAVRSGKEGRAGLRTTLPRGGKDEHRFPRQQQRWATSGLHRGGGLFERGQGDATWSHSIPPAEKATSSPKASATAGAKPYTYWASSAPISGGRYNTPSSADKQ-APLATT-----TSATARGAPPLEMASAQSPSGFGKEEGWKRWRKGGRENGGRPVMANAAEASKVLDELLEDERELEAFLEEEFARRER 1358
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BLAST of mRNA_L-elsbetiae_contig701.15808.1 vs. uniprot
Match: A0A6H5KQQ9_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ9_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 1.640e-71
Identity = 185/398 (46.48%), Postives = 228/398 (57.29%), Query Frame = 0 
Query:    1 MDSDGDGRLTLAELGAALRRTGARLSLSQITALFRHFDEGL-GLDTVGRGQFLWEFVDSKRLLEQWREAGDVRGGHSARTAPFRNR---------------------------AKKTSYGGGRSG----GDDGTLSRYDVLRSLEELGVHVDGWEADALLDRFTVGDGSDNVDWVXXXXXXXXXXXXXXXXXXXXXXXXXXPSSGSKSAAKARGE-RAGLRTSLPRHSR------QQQRHWATSGFHRGGGLF-EGEGNVT-----AQGRPTRSTETATATTGGKPYYHWASSAPSSAGGWRKEDTVGSETAPTARTKARTRTGSADRGSSSEAVMERSSPPPSLRLGVPRGRRGGSGGG---LVRNVAEASILLDGLLEDQQELEAFLEEEIAKRER 350
            +D+DGDGRLTLAE+GAAL+R GARLSLSQ+TALFRHF  G  GLD V RG+ LW+F+D+KRL+EQWR AGD+ GGH ART PFR R                           AK+ SYG            GTLSRYD  R+LEELGV VDGWEA A++DRF VG   D VDW                  XXXXXXXX     +  AA++  E RAGLRT+LPR  +      +QQ+ WATSG HRGGGLF  G G+ T            S+  A++T+GGKPY +WASS P S G +    +   +  P A T + T    A R S  +  +  S P      G    ++GG   G   ++ N AEAS +LD LLED+++LEAFLEEE A+RER
Sbjct:  950 LDADGDGRLTLAEMGAALKRVGARLSLSQVTALFRHFGRGRPGLDKVDRGEILWDFIDTKRLMEQWRRAGDIGGGHRARTVPFRKRVRASKREDYWRIFLKSSSLWPVVHRAAAKRASYGXXXXXXXXXASGGTLSRYDFSRALEELGVQVDGWEASAVMDRFGVG--MDEVDWKAFVSFMQAAEREEVSTDXXXXXXXXYFGGRNVIAARSGKEGRAGLRTNLPRGGKGDHRFPRQQQRWATSGLHRGGGLFGRGRGDATWSYSTPPAEKAASSPKASSTSGGKPYTYWASSVPISRGRYNTPSSADKQN-PLATTTSAT----ALRASPWDMAIAPSPPGSGKEAGCRSWKKGGKENGGKPVMANAAEASKVLDELLEDERDLEAFLEEEFARRER 1340
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig701.15808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLS0_ECTSI2.450e-7950.00EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KQQ9_9PHAE1.640e-7146.48EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 1..169
e-value: 2.8E-12
score: 48.4
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 2..14
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..24
score: 10.887
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 100..118
score: 5.475
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig701contigL-elsbetiae_contig701:19384..22338 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig701.15808.1mRNA_L-elsbetiae_contig701.15808.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig701 18929..22539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig701.15808.1 ID=prot_L-elsbetiae_contig701.15808.1|Name=mRNA_L-elsbetiae_contig701.15808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=368bp
MDSDGDGRLTLAELGAALRRTGARLSLSQITALFRHFDEGLGLDTVGRGQ
FLWEFVDSKRLLEQWREAGDVRGGHSARTAPFRNRAKKTSYGGGRSGGDD
GTLSRYDVLRSLEELGVHVDGWEADALLDRFTVGDGSDNVDWVAFVSFMQ
AAESKDGEDNNKSNSSSKTPSSGSKSAAKARGERAGLRTSLPRHSRQQQR
HWATSGFHRGGGLFEGEGNVTAQGRPTRSTETATATTGGKPYYHWASSAP
SSAGGWRKEDTVGSETAPTARTKARTRTGSADRGSSSEAVMERSSPPPSL
RLGVPRGRRGGSGGGLVRNVAEASILLDGLLEDQQELEAFLEEEIAKRER
PGGGERGGGVARRQGAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair