prot_L-elsbetiae_contig70.15798.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig70.15798.1
Unique Nameprot_L-elsbetiae_contig70.15798.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length550
Homology
BLAST of mRNA_L-elsbetiae_contig70.15798.1 vs. uniprot
Match: D7FTX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX4_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 3.990e-80
Identity = 205/411 (49.88%), Postives = 236/411 (57.42%), Query Frame = 0
Query:  158 FEAPATPGCYSPRLKQQXXXXXXXXXXXXXXXXXXG--VLHRAQSLPAEEGRGG----AAAALPRGYDGIIDMASPRGGMAPQVRGRLRLGLSRRRASARVSPVRFFCRRAPPAATTPAGLRLQMCGAPNAPMSAPATPVMVYAYPHGYMMAYPPVSVQSVQTPRSARSQASKAWDPYECVSPSGESVPPGFGPRDGETRAPSLDSSPVA-SPRMSVSSHESPSKPGGGDERQGEDDYDGVSQREQRSRASPVLSDVIDGGFYEDNAQQQDGDAEEIPTPSSSSAKPTLSLSLSFLDPQGNTESSENNCSFKTP------------GRVADGEDKENTRSFGGRSGXXXXXXXXXXXSSFGVFAEAGNQLLGQKRVGGDNETEKHKPFTGSYFQVSPGSFLQSSKRQRHFA 549
            FEAPATPG  SP L            XXXXXXX     VL R  SLPAE+  GG    AAA    G     D ASPRGG+APQ R     G          +P    C +APP    PAGLRLQMCG  N PMSAP TPVMVYA  HGYMMAYPPV+V SVQTPRS RSQASKAWDPYECVSPSGES   GFG R  ET   S + SPVA S  MSVSS  S SK GG    +G+DD    + +  RSRAS V+SDVI+GG   D+++Q             +S++P+L+ + + L  +G T++ +   S+KTP            G   DGEDKEN++   G  G                  EA  QL GQKR GGD + EK K FTGSYFQVSP SFLQSSKRQR+FA
Sbjct:    2 FEAPATPGLQSPSLTMVGGRDQRLAQXXXXXXXWQQHPVLRRTHSLPAEDESGGEPVAAAAVASTGRLDGNDRASPRGGVAPQSRS---FGAPLAMPVPLQAPRAQGCMQAPPPNAPPAGLRLQMCGLTNTPMSAPVTPVMVYAPGHGYMMAYPPVNVPSVQTPRSTRSQASKAWDPYECVSPSGESTHAGFGRRGKETPDLSPEGSPVALSSAMSVSSRGSLSKQGG----RGDDD----ASQGLRSRASSVISDVIEGGVLNDDSRQN-----------KASSQPSLA-NPALLPLEGKTDNEDG--SYKTPIRLRLSCETSAGGTATDGEDKENSQVGAGFVGGGKKREGE-------AVLEAKKQLSGQKRAGGDIDIEKQKSFTGSYFQVSPSSFLQSSKRQRNFA 380          
BLAST of mRNA_L-elsbetiae_contig70.15798.1 vs. uniprot
Match: A0A6H5KL22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL22_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.860e-19
Identity = 80/197 (40.61%), Postives = 106/197 (53.81%), Query Frame = 0
Query:  365 MSVSSHESPSKPGGGDERQGEDDYDGVSQREQRSRASPVLSDVIDGGFYEDNAQQQDGDAEEIPTPSSSSAKPTLSLSLSFLDPQGNTESSENNCSFKTPGRV------------ADGEDKENTRSFGGRSGXXXXXXXXXXXSSFGVFAEAGNQLLGQKRVGGDNETEKHKPFTGSYFQVSPGSFLQSSKRQRHFA 549
            MSVSS  S SK G     +G+DD    + +  RSRAS V+SDVI+GG   D+++Q             ++++P+L++    L  +G T++ +   S+KTP RV            ADG DKEN++   G  G                  EA  Q+ GQKR GGD   EK K FTGSYFQVSP SFL+SSKRQR+FA
Sbjct:    1 MSVSSRGSLSKQGA----RGDDD----ASQGLRSRASSVISDVIEGGGLNDDSRQN-----------KANSQPSLAIPA-LLPLEGKTDNEDG--SYKTPSRVRLSCETSAGGTAADGADKENSQVGAGLVGGGKKREGD-------AALEAKKQISGQKRTGGD--IEKQKSFTGSYFQVSPSSFLKSSKRQRNFA 166          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig70.15798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTX4_ECTSI3.990e-8049.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL22_9PHAE1.860e-1940.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 171..192
NoneNo IPR availableCOILSCoilCoilcoord: 86..117
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 30..118
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 168..446
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 30..118
coord: 168..446

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig70contigL-elsbetiae_contig70:52790..61509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig70.15798.1mRNA_L-elsbetiae_contig70.15798.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig70 52553..61561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig70.15798.1 ID=prot_L-elsbetiae_contig70.15798.1|Name=mRNA_L-elsbetiae_contig70.15798.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=550bp
MLIHGDGVPPQHMDGELILPSPSRHRMQLANPSPSPRGPPRQQRYWQSGQ
PQHPGALSIPRFPNTMPAGAPHCPSPVVKVPIYSTLSEAIEQQHRQQQQQ
QQQQQQQQQQQQQQQRQPRLTGAMPFCVPPPPPPPSLGSRASPAVHSARG
GSTSFFPFEAPATPGCYSPRLKQQQQQQQQQQQQQQQQQQQQGVLHRAQS
LPAEEGRGGAAAALPRGYDGIIDMASPRGGMAPQVRGRLRLGLSRRRASA
RVSPVRFFCRRAPPAATTPAGLRLQMCGAPNAPMSAPATPVMVYAYPHGY
MMAYPPVSVQSVQTPRSARSQASKAWDPYECVSPSGESVPPGFGPRDGET
RAPSLDSSPVASPRMSVSSHESPSKPGGGDERQGEDDYDGVSQREQRSRA
SPVLSDVIDGGFYEDNAQQQDGDAEEIPTPSSSSAKPTLSLSLSFLDPQG
NTESSENNCSFKTPGRVADGEDKENTRSFGGRSGGGKPNGGGGGGSSFGV
FAEAGNQLLGQKRVGGDNETEKHKPFTGSYFQVSPGSFLQSSKRQRHFA*
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