prot_L-elsbetiae_contig70.15796.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig70.15796.1
Unique Nameprot_L-elsbetiae_contig70.15796.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length187
Homology
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BLAST of mRNA_L-elsbetiae_contig70.15796.1 vs. uniprot
Match: D7G4G1_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G1_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 1.420e-39
Identity = 96/187 (51.34%), Postives = 116/187 (62.03%), Query Frame = 0 
Query:    2 DVSMLESQMSRGMAELGTAATVSAVPVSAVPQQQ------WTG-QPGYSPVTPVPAGQAPPIAGSSLDIQAIMNAGLMRGMLMHPAATTAAGPPQQVLMCNLCGNMDPNLFVDAGQGYARCHGVYANGALCKYILPWPAGSLPEYKPEIAITQQEA-VGLVDPPHQXXXXXXXXXLSGSNYAGGVAY 180
            DVS+LE+ MS GMA+ G                       W   Q GY+P+TP+  GQ P    SS+D+QAIMNAG++RGMLM P A  AAG   +V+MCN CGNM+PNLF DAGQGYARCHGVYANGALCK I+PWPAGSLP+YK ++   QQ+A V  ++P HQ           G    GG AY
Sbjct: 1233 DVSLLEAHMSTGMADDGGVXXXXXXXXXXXXXXXXXXXXXWAAAQLGYAPLTPL-TGQTP----SSVDVQAIMNAGVIRGMLMPPPA--AAG---RVMMCNFCGNMNPNLFSDAGQGYARCHGVYANGALCKGIMPWPAGSLPQYKHDLG--QQDATVAALNPSHQVLQQQAGAAPGGYADVGGSAY 1407
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BLAST of mRNA_L-elsbetiae_contig70.15796.1 vs. uniprot
Match: A0A6H5KUW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW2_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 3.260e-25
Identity = 57/102 (55.88%), Postives = 64/102 (62.75%), Query Frame = 0 
Query:   80 AATTAAGPPQQVLMCNLCGNMDPNLFVDAGQGYARCHGVYANGALCKYILPWPAGSLPEYKPEIAITQQEA-VGLVDPPHQXXXXXXXXXLSGSNYAGGVAY 180
            AA     P   V+MCN CGNM+PNLF DAGQGYARCHGVYANGALCK I+PWP GSLP YK  +   QQ+A +  +DP HQ           G    GG AY
Sbjct: 1235 AAQFGYAPLTPVMMCNFCGNMNPNLFSDAGQGYARCHGVYANGALCKGIMPWPVGSLPRYKHNLG--QQDATITALDPSHQVLQQQAGAAPGGYADVGGSAY 1334
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig70.15796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4G1_ECTSI1.420e-3951.34Heat shock protein 40 like protein/ DnaJ domain co... [more]
A0A6H5KUW2_9PHAE3.260e-2555.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig70contigL-elsbetiae_contig70:28310..33746 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig70.15796.1mRNA_L-elsbetiae_contig70.15796.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig70 28310..33753 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig70.15796.1 ID=prot_L-elsbetiae_contig70.15796.1|Name=mRNA_L-elsbetiae_contig70.15796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=187bp
MDVSMLESQMSRGMAELGTAATVSAVPVSAVPQQQWTGQPGYSPVTPVPA
GQAPPIAGSSLDIQAIMNAGLMRGMLMHPAATTAAGPPQQVLMCNLCGNM
DPNLFVDAGQGYARCHGVYANGALCKYILPWPAGSLPEYKPEIAITQQEA
VGLVDPPHQQAGGGGGGGLSGSNYAGGVAYGHQPSYS
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