prot_L-elsbetiae_contig699.15772.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig699.15772.1
Unique Nameprot_L-elsbetiae_contig699.15772.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length100
Homology
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BLAST of mRNA_L-elsbetiae_contig699.15772.1 vs. uniprot
Match: D7G490_ECTSI (Dhm exonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G490_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 1.970e-7
Identity = 52/104 (50.00%), Postives = 63/104 (60.58%), Query Frame = 0 
Query:    1 MAPRRPLCSGDQGNSGHACPAASRPPSCWRKARRAGSS-GGR---VVTLAVGLLCSSTAPTPAFGFFLPGAAVSPSGRSAGGNSMGVGGGRAVGVSSLRSSFAG 100
            MA RR L +  +G S H    A R  S  R  R+ G S GGR    +++AVGLL SST+P PA  F LPGA VS S      +SMG+G G A+G+SS RSSFAG
Sbjct:    6 MASRR-LYAEKKGQSSHQDSEALRLASTGRNMRKRGRSHGGRHSLALSIAVGLLRSSTSPAPACAFLLPGA-VSRS------SSMGLGSGSAIGISSGRSSFAG 101
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig699.15772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G490_ECTSI1.970e-750.00Dhm exonuclease n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig699contigL-elsbetiae_contig699:21270..21569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig699.15772.1mRNA_L-elsbetiae_contig699.15772.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig699 21256..21569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig699.15772.1 ID=prot_L-elsbetiae_contig699.15772.1|Name=mRNA_L-elsbetiae_contig699.15772.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=100bp
MAPRRPLCSGDQGNSGHACPAASRPPSCWRKARRAGSSGGRVVTLAVGLL
CSSTAPTPAFGFFLPGAAVSPSGRSAGGNSMGVGGGRAVGVSSLRSSFAG
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