prot_L-elsbetiae_contig6987.15770.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6987.15770.1
Unique Nameprot_L-elsbetiae_contig6987.15770.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length122
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6987.15770.1 vs. uniprot
Match: A0A6H5JFU4_9PHAE (Galactinol--sucrose galactosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU4_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 2.970e-33
Identity = 76/117 (64.96%), Postives = 86/117 (73.50%), Query Frame = 0 
Query:    1 MFNAGGAVASETLSQEGGSRAEAELMVKGSGRFLALCSLRPAAVLFDGAPLHAFSHRRTAEGVPFLEIELPEGYSGKPRPLVVQWDKDSRAYSGGSXXXXXXXXXXXGAIGLGRPNG 117
            MFNAGGA+ SE LS +GG RA+AE+ VKGSGRFLALCSLRPAAVLFDG  +  FSH R +EGVP LE+ LP GY+GKPR LVVQWDKDSR  +GGS           G  G GRP+G
Sbjct:  868 MFNAGGAIVSEKLSYQGG-RAQAEMTVKGSGRFLALCSLRPAAVLFDGKSV-PFSHSRDSEGVPSLELALPTGYTGKPRSLVVQWDKDSRL-AGGS-----------GVNGSGRPHG 970
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6987.15770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFU4_9PHAE2.970e-3364.96Galactinol--sucrose galactosyltransferase n=1 Tax=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6987contigL-elsbetiae_contig6987:4133..5743 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6987.15770.1mRNA_L-elsbetiae_contig6987.15770.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6987 3888..7731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6987.15770.1 ID=prot_L-elsbetiae_contig6987.15770.1|Name=mRNA_L-elsbetiae_contig6987.15770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
MFNAGGAVASETLSQEGGSRAEAELMVKGSGRFLALCSLRPAAVLFDGAP
LHAFSHRRTAEGVPFLEIELPEGYSGKPRPLVVQWDKDSRAYSGGSSGGS
SGGDGAGGAIGLGRPNGGDLP*
back to top