prot_L-elsbetiae_contig698.15757.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig698.15757.1
Unique Nameprot_L-elsbetiae_contig698.15757.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length219
Homology
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BLAST of mRNA_L-elsbetiae_contig698.15757.1 vs. uniprot
Match: D8LJ14_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ14_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 1.940e-76
Identity = 120/165 (72.73%), Postives = 134/165 (81.21%), Query Frame = 0 
Query:   49 MTIYGIGGVSGTGKTHFRTTCESLRGARALDIADVYEESVAAGRPDLHWKTALERFEARVRGRLEEDRSGDIVLEAFFRPDGAQRQVIEDLAQEFGVYVRWGWASARRADCLSRVSNEQAGRDSSERKEKRLSFIRSAEPWFFHERPTESLQLMANLVRAPAHQT 213
            MTIYGIGGVSGTGKTHFRT+CE  R  R LDIADVYEES+A G PD+HW+TAL+ F+ RVRG LEEDRS DIVLEAFFRPDGAQRQ IE +A+ FGV V WGWA A RADCLSRVSNE+ G DSSER++KRLSFI++AE  FF ERP ESL  +A   RAP  QT
Sbjct:    1 MTIYGIGGVSGTGKTHFRTSCEGFRDVRVLDIADVYEESLAQGHPDMHWRTALQVFQGRVRGWLEEDRSSDIVLEAFFRPDGAQRQAIEAIARGFGVDVIWGWAWAPRADCLSRVSNERGGHDSSERRQKRLSFIKTAESSFFRERPEESLASLA--TRAPTRQT 163
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BLAST of mRNA_L-elsbetiae_contig698.15757.1 vs. uniprot
Match: A0A835SZY1_CHLIN (RING-type domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SZY1_CHLIN)

HSP 1 Score: 64.7 bits (156), Expect = 1.280e-9
Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = 0 
Query:  120 IVLEAFFRPDGAQRQVIEDLAQEFGVYVRWGWASARRADCLSRV-SNEQAGRDSSERKEKRLSFIRSAEPWFFHERPTE 197
            IV EAFF P   QR+ IE LAQE+   V + W +A RA+CL RV ++  AGRDS ER + R+SFI+     +F ER  E
Sbjct:   16 IVCEAFFAPGKLQRRGIETLAQEYDFDVCYIWCAASRAECLRRVIADYNAGRDSWERYQARVSFIQEIPEKYFWERDDE 94
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig698.15757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ14_ECTSI1.940e-7672.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835SZY1_CHLIN1.280e-949.37RING-type domain-containing protein n=1 Tax=Chlamy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 49..212
e-value: 2.6E-9
score: 39.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 46..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig698contigL-elsbetiae_contig698:3206..4110 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig698.15757.1mRNA_L-elsbetiae_contig698.15757.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig698 2772..4744 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig698.15757.1 ID=prot_L-elsbetiae_contig698.15757.1|Name=mRNA_L-elsbetiae_contig698.15757.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=219bp
MLVGEEYSSNFHSPRYAQRHVCLLPKTPQQRHINRPSTTPNAIPPTDPMT
IYGIGGVSGTGKTHFRTTCESLRGARALDIADVYEESVAAGRPDLHWKTA
LERFEARVRGRLEEDRSGDIVLEAFFRPDGAQRQVIEDLAQEFGVYVRWG
WASARRADCLSRVSNEQAGRDSSERKEKRLSFIRSAEPWFFHERPTESLQ
LMANLVRAPAHQTNLQFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase