prot_L-elsbetiae_contig696.15730.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig696.15730.1
Unique Nameprot_L-elsbetiae_contig696.15730.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length348
Homology
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BLAST of mRNA_L-elsbetiae_contig696.15730.1 vs. uniprot
Match: A0A6H5JJQ7_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJQ7_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 3.530e-34
Identity = 87/158 (55.06%), Postives = 104/158 (65.82%), Query Frame = 0 
Query:  202 ALPAFMQPGGGMVPVAVLTGCDAATIAPGSTEECGVTSMLLGYTSKNVIELKDQGEDGRVVWRSRKSLVKTAQQSVGSKLSSWFRR--KTPGGQAGIAKSAPHEAIAGLYIRETPRNHLAMMRGPPSRGEQEEGPG----------GAIQRVEFGVML 347
            +LPAFM+P GGMV V  LTGC AA IAPG +EECG T MLLGYT KN++EL   G+ G+V WRSRKSL+KTA+QSVG K+SS FRR  K+P G  G +  AP +AIAGL +RET    LA+M+ P S G    G G               VEFGV+L
Sbjct: 2412 SLPAFMRPDGGMVTVEFLTGCRAAKIAPGLSEECGSTPMLLGYTGKNLMELIRPGKKGKVAWRSRKSLIKTAKQSVGFKVSSMFRRRSKSPEG-GGPSGPAPPQAIAGLSLRETSDGRLALMKDP-SGGSSGGGDGDMDGEDLGGTAGHDVVEFGVLL 2567
[Close]
BLAST of mRNA_L-elsbetiae_contig696.15730.1 vs. uniprot
Match: D7FUP8_ECTSI (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP8_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 5.020e-31
Identity = 80/157 (50.96%), Postives = 99/157 (63.06%), Query Frame = 0 
Query:  202 ALPAFMQPGGGMVPVAVLTGCDAATIAPGSTEECGVTSMLLGYTSKNVIELKDQGEDGRVVWRSRKSLVKTAQQSVGSKLSSWFRRKTPGGQAGIAKS-APHEAIAGLYIRETPRNHLAMMRGPPSRGEQEEGPG--------GAIQR--VEFGVML 347
            +LP FM+P GGMV V  LTGC AA IAPG +E C  T MLLG+T KN++EL   G+ G+V WRSRKSL+K A+QSV SK+SS FRR++   + G      P +AIAGLY+RET    LA+M+  PS G    G G        GA      EFGV+L
Sbjct: 2094 SLPGFMRPDGGMVTVEFLTGCRAAKIAPGLSEGCESTPMLLGHTGKNLMELIRPGKKGKVAWRSRKSLIKIAKQSVASKVSSLFRRRSESPEGGGPSGPVPPQAIAGLYLRETSDGRLALMKKDPSGGSGGVGDGDMDGEDLGGAAGHDVEEFGVLL 2250
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig696.15730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJQ7_9PHAE3.530e-3455.06CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
D7FUP8_ECTSI5.020e-3150.96CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig696contigL-elsbetiae_contig696:3227..5848 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig696.15730.1mRNA_L-elsbetiae_contig696.15730.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig696 3227..5848 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig696.15730.1 ID=prot_L-elsbetiae_contig696.15730.1|Name=mRNA_L-elsbetiae_contig696.15730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=348bp
MTAARPAARHAPAERAAPSISAAATSAGQAGLRMAFPDPLLRDGSATATA
TAAPGGNRGVDEPRGGVQPPVSPLPPVPWTAAAAAAETNGREGSDAVCPP
RGERMVTWTSPPRLKRRIPEKIFAGWAWVPNPAYPRPDGGAPFDEGIASE
AAAREEPAAAERADDATVEAEEGGVAESEAEERLAGEAEAVGGRVDPKLK
YALPAFMQPGGGMVPVAVLTGCDAATIAPGSTEECGVTSMLLGYTSKNVI
ELKDQGEDGRVVWRSRKSLVKTAQQSVGSKLSSWFRRKTPGGQAGIAKSA
PHEAIAGLYIRETPRNHLAMMRGPPSRGEQEEGPGGAIQRVEFGVMLE
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