prot_L-elsbetiae_contig6955.15726.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6955.15726.1
Unique Nameprot_L-elsbetiae_contig6955.15726.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length389
Homology
BLAST of mRNA_L-elsbetiae_contig6955.15726.1 vs. uniprot
Match: A0A6H5L882_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L882_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 1.060e-107
Identity = 249/410 (60.73%), Postives = 269/410 (65.61%), Query Frame = 0
Query:    1 MWQAAANAARAAGRFARRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVLRAGDDARRRQCLSRTRGESVAALANFLPALRKRLFLAVDVTGPVRELKALRIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAADVRSREVELWDKVKVTALTRLVVSLYAFSALALMLHMQLHILGRLSFEESRELLRRTGAAAPGNRGDGTDHNXXXXXXXXXXXXXETAA------PFLSGSPRPLPXXXXXXXXXXXXXXXXXXXXXGTAGG-----LALSMEARHALLSATYEHVLGDGLRTLVRDVERAVSRCTCSWRAHTRQQVEFQDLVAVMRRVRREIEGPVGGIDYYEGGG---GV-------LGRSSGVRHAQLLRYMINPSDG 389
            MW+AA +AARAAGRFARRHR                                M+++AG DARRRQC+SRTRGE VAALANFLPALRKRLFLAVDVTGPVRELKALR G          XXXXXXXXXX  XXXXXXXXXXXXXXXXX         EA D++SREVELW++VKVTALTRLVVSLYAF+ALALMLHMQLHILGRLS EES+ELL RT        G  T                ETAA      P    SP PL                        +GG     LALSME RH+LLSATYEHVLGDGLRTLVRDVERAVSRCTCSW+AHTRQQVEFQDLVAV+RRVRRE+EGP+GG  YY GGG   GV       LGRSSG+RHA LLRY+INPSDG
Sbjct:    1 MWKAAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALREAEDEHAAMLVQAGRDARRRQCMSRTRGECVAALANFLPALRKRLFLAVDVTGPVRELKALRTG----MTGATAXXXXXXXXXXGGXXXXXXXXXXXXXXXXXAVADGSAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHILGRLSLEESQELLLRTSNDDDITPGSST----------------ETAASLPHGNPGTMSSPSPLTTTTRNGVPAPPAAVRLGAGASDWSGGAVTAGLALSMEGRHSLLSATYEHVLGDGLRTLVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGGGGDFNGVGGAVGEGLGRSSGIRHALLLRYIINPSDG 390          
BLAST of mRNA_L-elsbetiae_contig6955.15726.1 vs. uniprot
Match: D7FTT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT6_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 7.010e-46
Identity = 135/201 (67.16%), Postives = 145/201 (72.14%), Query Frame = 0
Query:    1 MWQAAANAARAAGRFARRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVLRAGDDARRRQCLSRTRGESVAALANFLPALRKRLFLAVDVTGPVRELKALRIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAADVRSREVELWDKVKVTALTRLVVSLYAFSALALMLHMQLHIL 201
            MWQAA +AARAAGRFARRHR                                M+++AG DARRRQC+SRTRGE VAALANFLPALRKRLFLAVDVTGPVRELKALR G           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX        EA D++SREVELW++VKVTALTRLVVSLYAF+ALALMLHMQLHIL
Sbjct:    1 MWQAAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALKEAEDEHAAMLVQAGHDARRRQCMSRTRGECVAALANFLPALRKRLFLAVDVTGPVRELKALRTG-----LAGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADGSAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHIL 196          
BLAST of mRNA_L-elsbetiae_contig6955.15726.1 vs. uniprot
Match: D7FTT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT5_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 5.460e-43
Identity = 84/110 (76.36%), Postives = 91/110 (82.73%), Query Frame = 0
Query:  290 MEARHALLSATYEHVLGDGLRTLVRDVERAVSRCTCSWRAHTRQQVEFQDLVAVMRRVRREIEGPVGGIDYYEGG----------GGVLGRSSGVRHAQLLRYMINPSDG 389
            MEARH+LLS+TYEHVLG GLR LVRDVERAVSRCTCSW+AHTRQQVEFQDLVAV+RRVRRE+EGP+GG  YY G           G  LGRSSGVRHA LLRY+INPSDG
Sbjct:    1 MEARHSLLSSTYEHVLGGGLRALVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGGXXXXXXXXXAVGEGLGRSSGVRHALLLRYIINPSDG 110          
BLAST of mRNA_L-elsbetiae_contig6955.15726.1 vs. uniprot
Match: A0A835Z151_9STRA (Peroxin-3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z151_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.300e-34
Identity = 118/333 (35.44%), Postives = 151/333 (45.35%), Query Frame = 0
Query:   56 RAGDDARRRQCLSRTRGESVAALANFLPALRKRLFLAVDVTGPVRELKALRIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAADVRSREVELWDKVKVTALTRLVVSLYAFSALALMLHMQLHILGRLSFEESRELLRRTGAAAPGNRGDGTDHNXXXXXXXXXXXXXETAAPFLSGSPRPLPXXXXXXXXXXXXXXXXXXXXXGTAGGLALSMEARHALLSATYEHVLGDGLRTLVRDVERAVSRCTCSWRAHTRQQVEFQDLVAVMRRVRREIEGPVGGIDYYEGGGGVLGRSSGVRHAQLLRYMINPSD 388
            R+  + R R  L R R E   A+ NFLP LR RL+   D++ PVR LKALR                                                    ++    E ELWD+VKVT+ TRL++S+YAFSAL LML +Q+HILGR S+EE+ ELL+R           G       XXXXXXXXXXE                                       G +L M+AR A LS+TYE +LGDGLR L  DVE AV  C+  W   ++  V +++L  ++RRVR E+EG VGG     G        +      LLRY+INP D
Sbjct:   56 RSAKERRFRLYLGRARAECRTAILNFLPTLRSRLYATADISRPVRALKALR--------------------------------QSRDAAASAQGEGGDPAPPPSEEDPAEAELWDEVKVTSFTRLLLSMYAFSALNLMLRLQMHILGRYSYEEASELLKREA---------GQKQQPGTXXXXXXXXXXERGV------------------------------------GASLPMDARRAFLSSTYEFLLGDGLRALAADVEAAVRTCSADWHCQSKLAVGWEELAGMLRRVRAEVEGGVGGAAAAAG-------DAQAAQDPLLRYIINPID 304          
BLAST of mRNA_L-elsbetiae_contig6955.15726.1 vs. uniprot
Match: K8YNM0_NANGC (Peroxin-3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNM0_NANGC)

HSP 1 Score: 65.1 bits (157), Expect = 1.180e-8
Identity = 49/153 (32.03%), Postives = 68/153 (44.44%), Query Frame = 0
Query:   59 DDARRRQCLSRTRGESVAALANFLPALRKRLFLAVDVTGPVRELKALRIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAADVRSREVELWDKVKVTALTRLVVSLYAFSALALMLHMQLHILGRLSFEESRE 211
            D  R +  + R+RGE V AL NF+  LRKR++  VDVT PV+ LKA R GG                                                    +  E  LW +VKV+  +R  ++ Y F+ L +ML +Q+HILGR +FE SR+
Sbjct:   54 DQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGR-GGLS--------------------------------------------------KQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQ 155          
BLAST of mRNA_L-elsbetiae_contig6955.15726.1 vs. uniprot
Match: W7TYS6_9STRA (Peroxisomal biogenesis factor 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYS6_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 7.630e-8
Identity = 49/153 (32.03%), Postives = 68/153 (44.44%), Query Frame = 0
Query:   59 DDARRRQCLSRTRGESVAALANFLPALRKRLFLAVDVTGPVRELKALRIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAADVRSREVELWDKVKVTALTRLVVSLYAFSALALMLHMQLHILGRLSFEESRE 211
            D  R +  + R+RGE V AL NF+  LRKR++  VDVT PV+ LKA R GG                                                    +  E  LW +VKV+  +R  ++ Y F+ L +ML +Q+HILGR +FE SR+
Sbjct:   54 DQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGR-GGLS--------------------------------------------------KQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQ 155          
BLAST of mRNA_L-elsbetiae_contig6955.15726.1 vs. uniprot
Match: A0A7S2UWY6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWY6_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 4.010e-5
Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 0
Query:  157 EAADVRSREVELWDKVKVTALTRLVVSLYAFSALALMLHMQLHILGRLSF-EESRE 211
            E   ++ +E  LW+KVK   +TRLVV LY+F +L+L+L +Q H+L R +F EES+E
Sbjct:   27 EQKQMQEQEAVLWEKVKTVGITRLVVGLYSFCSLSLLLQLQFHVLARHNFNEESQE 82          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6955.15726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L882_9PHAE1.060e-10760.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT6_ECTSI7.010e-4667.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTT5_ECTSI5.460e-4376.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z151_9STRA1.300e-3435.44Peroxin-3 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
K8YNM0_NANGC1.180e-832.03Peroxin-3 n=1 Tax=Nannochloropsis gaditana (strain... [more]
W7TYS6_9STRA7.630e-832.03Peroxisomal biogenesis factor 3 n=2 Tax=Monodopsid... [more]
A0A7S2UWY6_9STRA4.010e-548.21Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006966Peroxin-3PFAMPF04882Peroxin-3coord: 158..354
e-value: 1.1E-15
score: 57.6
IPR006966Peroxin-3PANTHERPTHR28080FAMILY NOT NAMEDcoord: 13..353
NoneNo IPR availablePANTHERPTHR28080:SF1PEROXISOMAL BIOGENESIS FACTOR 3coord: 13..353
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 195..389
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..194
NoneNo IPR availableTMHMMTMhelixcoord: 21..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6955contigL-elsbetiae_contig6955:198..7098 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6955.15726.1mRNA_L-elsbetiae_contig6955.15726.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6955 198..7119 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6955.15726.1 ID=prot_L-elsbetiae_contig6955.15726.1|Name=mRNA_L-elsbetiae_contig6955.15726.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=389bp
MWQAAANAARAAGRFARRHRRAIVVGGVVGAAACVYHGMKKALKEAEEEH
AAMVLRAGDDARRRQCLSRTRGESVAALANFLPALRKRLFLAVDVTGPVR
ELKALRIGGGGAAAAGAVVAGAGGGAGSGGGGGGGGGGGDSAAADSGAAA
AVAAAAEAADVRSREVELWDKVKVTALTRLVVSLYAFSALALMLHMQLHI
LGRLSFEESRELLRRTGAAAPGNRGDGTDHNNNDNDSDTDTDTDETAAPF
LSGSPRPLPPPPPPPAAVGGGGGGGGGGSGGTAGGLALSMEARHALLSAT
YEHVLGDGLRTLVRDVERAVSRCTCSWRAHTRQQVEFQDLVAVMRRVRRE
IEGPVGGIDYYEGGGGVLGRSSGVRHAQLLRYMINPSDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006966Peroxin-3