prot_L-elsbetiae_contig6941.15711.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6941.15711.1
Unique Nameprot_L-elsbetiae_contig6941.15711.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length904
Homology
BLAST of mRNA_L-elsbetiae_contig6941.15711.1 vs. uniprot
Match: A0A6H5KVN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVN9_9PHAE)

HSP 1 Score: 600 bits (1546), Expect = 1.600e-197
Identity = 441/956 (46.13%), Postives = 510/956 (53.35%), Query Frame = 0
Query:    7 FLIDDDRD-SPQRLLPNRQDRVGPGRLSDDDGSDLFSPQPFTAPE-EELDVGGGTYDEQQEKLVPPRSHGDRCRTRAKQHERTVRGVGLRRVKPQVR-EENDGQRKGPGSGSSRADAGMASNVRRDGQERVIQQLTRDNGMLQRKVAGYQLALQLAADEDDFSTSPSFSEAMKLQQAAPPSFPRGGGTPAPSPRVARGWTHKNPPSASRTSPIERNLSYTTLVRQLDAGERRARMLKQANEVLGARVNELESGAVLRATQSRLAERDEEIAALREELSVMNRLARAQDRKFEGSQGYALTRRLWLAEEDLRIARSTISSLGAEVYGLRQFRKTQSQDRRRRRSAAEPTPDTASNTSARRSTLKRPVRRRRPSHQGDAAHGIRIKRQEQGKNSSSSSVGKRESRSPTTVAFGRSVEAANGPLSGGXXXXXXVKTVRSVDGEATSVLDGQATKDQTVEVKAEMLQRALANMRSKA-------KGELRAARAEIDELKEDKAALGKTLDTKAKEIRLQLLQ-------------------------------------------------------VNRLKHELQDLSAGAFKLEEASCAVAAASLPTRTRGIFSAAAAAGEVSTTAATKLGVAVEERRAKSAAVGNISSSSRPAAAGADRASLSSLVVTQRAPPPRSDSHPRAGRS---LRGSLVGQSSPMEWNRDWGGEGTEASRAPVTIPPDGTTMTTREVVEQEHA-----------GRAI-------AVQSSDKGGGEIA---GAAEVEQTAVSGKPMETEVAAPAAEGKTR---RPCPLAGILDMSEPPLRGHRRSYYNEDDGRVYRLSHC-DTRTAAGFEEPPREEERMKCVIDFKGEVQHGEDCVLRGVAHKTL---PPNKRNSLALEPRGSEQEPPPLAQASLTG------AISVRTWHKDSASGWDPAGVGEAARLSIV 860
            F  DDDR+  P++ L     R G   LS    +DL SPQPF APE EEL VGG    EQQ   +P + HGDRC TR ++ ER +RG   R   P+ R +E+DG+ +   S  SRA+A  A+++RR  QER+IQQLTRDNG+LQRKVAGYQLALQL+ADEDDFSTSPSFS AM+LQQAAPP+FPRGGGTPAPSPRVARGWTH+NPP   R SP+ERNLSYTTLVRQLD G R+AR LK+ NE LGARVNELESGAVLRATQSRL+ERDEEI ALREELSVMNRLARAQDRKFEG  GYAL RRLWL EE+LR ARSTIS+LGAE                                                                                                                           GQ TK Q  +VKAEML+RALANMR KA       KGEL AAR EID LKEDKA L + L+TKA+EIR+QLLQ                                                       VNRLK E+Q LSAGA KLEEASC VAAAS P R RGI SAAAAAGE S  A TKL     E RAKSA        SRP A G   AS++ L  +Q  PPPR D   R+ R     R  L GQ SPM WNR WGG+G   + A  T  PD     T        A           GRA+       A +S+D+G G +    G+ + +Q  V  KP + E  A AA G       PCPLAG++DMS+PPLR HRRSYYNEDDG+VY +    D  TAA   E PR++ER  CV+DF+G V+HG  C L  +A ++        R  L      +  + P   +  L G       ISVRTWH+DS S WDP G G      I 
Sbjct:  155 FSPDDDRNFPPEKFLG----RTGSVELS---SNDLSSPQPFGAPEKEELHVGGEVQLEQQ---LPHKPHGDRCETRGREKERDIRGARSRNFNPKYRSQESDGRIRLRASSQSRANARGAASIRRQRQERLIQQLTRDNGVLQRKVAGYQLALQLSADEDDFSTSPSFSAAMQLQQAAPPAFPRGGGTPAPSPRVARGWTHRNPPPPGRISPVERNLSYTTLVRQLDMGGRQARTLKRENEALGARVNELESGAVLRATQSRLSERDEEIVALREELSVMNRLARAQDRKFEGCHGYALARRLWLTEEELRTARSTISTLGAE---------------------------------------------------------------------------------------------------------------------------GQETKQQMADVKAEMLERALANMRKKARTVLDVAKGELEAARVEIDGLKEDKAVLTQALETKAREIRMQLLQAPKCSNPYVQLCPSNGMDSASANQNPMVPDAEQGLAFFRPQPHKPETRPPPLRVQVNRLKREIQHLSAGAIKLEEASCVVAAASFPLRARGISSAAAAAGETSALAVTKL----HEGRAKSAVY------SRPDAGGGG-ASMNLLDRSQ--PPPRPDRWLRSEREPWGARARLSGQFSPMGWNRVWGGDGAVTAPAADTGTPDAAGEATANGAPPAAAAVAGEVVSGALGRALSGLQADEAAKSADRGDGGVGVKLGSIKGKQEEVVAKPEKVEDIAAAAVGGEETHFHPCPLAGLMDMSDPPLRSHRRSYYNEDDGKVYSIPRTSDDVTAAELTEVPRDDERSMCVVDFQGIVRHGVGCALSQLAPRSARVSSATSRKQLLNSTSAAPGQDPDQERLLLPGENPLSIGISVRTWHRDSTSSWDPTGEGATGACHIA 964          
BLAST of mRNA_L-elsbetiae_contig6941.15711.1 vs. uniprot
Match: D7FQ47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ47_ECTSI)

HSP 1 Score: 535 bits (1379), Expect = 8.570e-175
Identity = 387/784 (49.36%), Postives = 440/784 (56.12%), Query Frame = 0
Query:    7 FLIDDDRD-SPQRLLPNRQDRVGPGRLSDDDGSDLFSPQPFTAPE-EELDVGGGTYDEQQEKLVPPRSHGDRCRTRAKQHERTVRGVGLRRVKPQVR-EENDGQRKGPGSGSSRADAGMASNVRRDGQERVIQQLTRDNGMLQRKVAGYQLALQLAADEDDFSTSPSFSEAMKLQQAAPPSFPRGGGTPAPSPRVARGWTHKNPPSASRTSPIERNLSYTTLVRQLDAGERRARMLKQANEVLGARVNELESGAVLRATQSRLAERDEEIAALREELSVMNRLARAQDRKFEGSQGYALTRRLWLAEEDLRIARSTISSLGAEVYGLRQFRKTQSQDRRRRRSAAEPTPDTASNTSARRSTLKRPVRRRRPSHQGDAAHGIRIKRQEQGKNSSSSSVGKRESRSPTTVAFGRSVEAANGPLSGGXXXXXXVKTVRSVDGEATSVLDGQATKDQTVEVKAEMLQRALANMRSKAKGELRAARAEIDELKEDKAALGKTLDTKAKEIRLQLLQVNRLKHELQDLSAGAFKLEEASCAVAAASLPTRTRGIFSAAAAAGEVSTTAATKLGVAVEERRAKSAAVGNISSSSRPAAAGADRASLSSLVVTQRAPPPRSDSHPRAGRS---LRGSLVGQSSPMEWNRDWGGEGTEASRAPVTIPPDGTTMTTR------------EVVEQEHAGRAI-------AVQSSDKGGGEIA---GAAEVEQTAVSGKPMETE-VAAPAA------EGKTRRPCPLAGILDMSEPPLRGHRRSYYNEDDGRVYRL 755
            F +DDDRD SP++ L     R G    S    +DLFSPQPF APE EEL VG     EQ+   +P + HGDRC+TR ++ E  +RG   R  KP+ R +ENDG+ +   S  SRADAG A+++RR  QER+IQQLTRDNG+LQRKVAGYQLALQL+ADEDDFSTSPSFS AM+LQQAAPP+FPRGGGTPAPSPRVARGWTH+NPP   R SP+ERNLSYTTLVRQLD G RRAR LK+ NE LGARVNELESGAVLRATQSRL+ERDEEI ALREELSVMNRLARAQDRKFEG  GYAL RRLWL EE+LR ARSTIS+LGAE                                                                                                                                                     AKGEL AAR EID LKEDKA L + L+TKA+EIR+QLLQVNRLK E+Q LSAGA KLEEASC VAAASLP R RGI SAAA AG  S +A TKL     E RAKSA        SRP A G   AS++ L  +Q  PPPRSD   R+ R     R  L GQ SPM W+RDWGGEG   +    T  PD     T             EVV     GRA+       A +S+D+G G +     + E +Q  V  KP + E +AA AA      E     PCPLAG++DMSE PLR HRRSYYNEDDG+   L
Sbjct:  176 FSLDDDRDPSPEKFLG----RTGSVEFS---SNDLFSPQPFGAPEKEELHVGDEVQLEQE---LPHKPHGDRCKTRGRKKESDIRGARSRTFKPRYRSQENDGRTRLRASSQSRADAGGAASIRRQRQERLIQQLTRDNGVLQRKVAGYQLALQLSADEDDFSTSPSFSTAMQLQQAAPPAFPRGGGTPAPSPRVARGWTHQNPPPPGRISPVERNLSYTTLVRQLDMGGRRARTLKRENEALGARVNELESGAVLRATQSRLSERDEEIVALREELSVMNRLARAQDRKFEGCHGYALARRLWLTEEELRTARSTISTLGAE-----------------------------------------------------------------------------------------------------------------------------------------------------AKGELEAARVEIDGLKEDKAVLTQALETKAREIRMQLLQVNRLKREIQHLSAGAIKLEEASCVVAAASLPLRARGISSAAAGAGGTSASAVTKL----HEGRAKSAVY------SRPGAGGGG-ASMNLLDRSQ--PPPRSDRRLRSEREPWGARARLSGQFSPMGWDRDWGGEGAVTAPTAGTGTPDAAGEATATGXXXXXAAVAGEVVSGAF-GRALSGLQADEAAKSADRGDGGVGVKLDSIEGKQEEVVAKPEKVEDIAAVAAXXAAGGEATHLHPCPLAGLMDMSELPLRSHRRSYYNEDDGKRQHL 786          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6941.15711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVN9_9PHAE1.600e-19746.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ47_ECTSI8.570e-17549.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 259..286
NoneNo IPR availableCOILSCoilCoilcoord: 515..535
NoneNo IPR availableCOILSCoilCoilcoord: 473..507

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6941contigL-elsbetiae_contig6941:905..6720 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6941.15711.1mRNA_L-elsbetiae_contig6941.15711.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6941 539..7635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6941.15711.1 ID=prot_L-elsbetiae_contig6941.15711.1|Name=mRNA_L-elsbetiae_contig6941.15711.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=904bp
MDHQSSFLIDDDRDSPQRLLPNRQDRVGPGRLSDDDGSDLFSPQPFTAPE
EELDVGGGTYDEQQEKLVPPRSHGDRCRTRAKQHERTVRGVGLRRVKPQV
REENDGQRKGPGSGSSRADAGMASNVRRDGQERVIQQLTRDNGMLQRKVA
GYQLALQLAADEDDFSTSPSFSEAMKLQQAAPPSFPRGGGTPAPSPRVAR
GWTHKNPPSASRTSPIERNLSYTTLVRQLDAGERRARMLKQANEVLGARV
NELESGAVLRATQSRLAERDEEIAALREELSVMNRLARAQDRKFEGSQGY
ALTRRLWLAEEDLRIARSTISSLGAEVYGLRQFRKTQSQDRRRRRSAAEP
TPDTASNTSARRSTLKRPVRRRRPSHQGDAAHGIRIKRQEQGKNSSSSSV
GKRESRSPTTVAFGRSVEAANGPLSGGGGGGGGVKTVRSVDGEATSVLDG
QATKDQTVEVKAEMLQRALANMRSKAKGELRAARAEIDELKEDKAALGKT
LDTKAKEIRLQLLQVNRLKHELQDLSAGAFKLEEASCAVAAASLPTRTRG
IFSAAAAAGEVSTTAATKLGVAVEERRAKSAAVGNISSSSRPAAAGADRA
SLSSLVVTQRAPPPRSDSHPRAGRSLRGSLVGQSSPMEWNRDWGGEGTEA
SRAPVTIPPDGTTMTTREVVEQEHAGRAIAVQSSDKGGGEIAGAAEVEQT
AVSGKPMETEVAAPAAEGKTRRPCPLAGILDMSEPPLRGHRRSYYNEDDG
RVYRLSHCDTRTAAGFEEPPREEERMKCVIDFKGEVQHGEDCVLRGVAHK
TLPPNKRNSLALEPRGSEQEPPPLAQASLTGAISVRTWHKDSASGWDPAG
VGEAARLSIVSSRDRSPRNSRVSLSGDGKFTPTIGFVRRPTHFTVEAVQE
QPA*
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