prot_L-elsbetiae_contig6922.15693.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6922.15693.1
Unique Nameprot_L-elsbetiae_contig6922.15693.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length191
Homology
BLAST of mRNA_L-elsbetiae_contig6922.15693.1 vs. uniprot
Match: D7FNS6_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNS6_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 3.720e-55
Identity = 119/206 (57.77%), Postives = 133/206 (64.56%), Query Frame = 0
Query:    1 MADAAQVVRRVTGRADCDVIPVDSGYGTPPALEGQSCLYVLRYSSLLDGDRG-------DRGAGGRRHPSAEALLPPTGYGDYYAXXXXXXXXPAIGEEDARASSSLSSSPSAPEG---EEAGVWFYVGESDAIRDRLKRHARRWGGG--------GKAYKLDAVVVAAENRSEARRLETAVIRAMKEEGFHLVSDKDGSRTHFSS 188
            M DA QVV RV  R   D+I V+SGYGTPPALEG+SCLYVLRYS+LL G          D G G  R PS+EA++   G      XXXXXXXX                          EEAGVWFYVGESD IR+RLKRHA+RWG G         +++KLDAVVV  ENRSEARRLETA+IRAMK+EGFHLVSDKDGSRTHFSS
Sbjct:    1 MKDATQVVCRVADRPHRDLISVESGYGTPPALEGRSCLYVLRYSALLGGXXXXXXXXXXDEGRGVGREPSSEAVVAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAGVWFYVGESDCIRERLKRHAKRWGDGRGSGXXXGARSFKLDAVVVPVENRSEARRLETALIRAMKDEGFHLVSDKDGSRTHFSS 206          
BLAST of mRNA_L-elsbetiae_contig6922.15693.1 vs. uniprot
Match: A0A6H5K8J3_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8J3_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 2.200e-52
Identity = 114/207 (55.07%), Postives = 134/207 (64.73%), Query Frame = 0
Query:    1 MADAAQVVRRVTGRADCDVIPVDSGYGTPPALEGQSCLYVLRYSSLLDGDRGD-------RGAGGRRHPSAEALLPPT--GYGDYYAXXXXXXXXPAIGEEDARASSSLSSSPSAPEGEEAGVWFYVGESDAIRDRLKRHARRWGGG----------GKAYKLDAVVVAAENRSEARRLETAVIRAMKEEGFHLVSDKDGSRTHFSS 188
            M DA QVV RV  R D D+I V+SGYGTPP LEG+SCLYVLRYS+LL    G+        G G  R PS+EA++     G+    A          +G+  +    +        E EEAGVWFYVGESD+IR+RLKRHA+RWG G           +A+KLDAVVV  ENRSEARRLETA+IRAMK+EGFHLVSDKDGSRTHFSS
Sbjct:  788 MKDATQVVCRVADRPDRDLISVESGYGTPPTLEGRSCLYVLRYSALLGSGGGNGASXXXXEGPGVGREPSSEAVVAEGVGGHAHGEARTLSGGGETEVGKPCSPNEGTGKGKEEEGE-EEAGVWFYVGESDSIRERLKRHAKRWGDGRXXXXXXXXXARAFKLDAVVVPVENRSEARRLETALIRAMKDEGFHLVSDKDGSRTHFSS 993          
BLAST of mRNA_L-elsbetiae_contig6922.15693.1 vs. uniprot
Match: A0A8J2SVM6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVM6_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 7.000e-6
Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 0
Query:  116 FYVGESDAIRDRLKRHARRWGGGGKAYKLDAVVVAAENRSEARRLETAVIRAMKEEGFHLVSDKDGSRTHF 186
             YVGE+D++RDRLK+H R +  G      DA+VV  +++S AR+ E   ++ ++  G  L+S  D S  HF
Sbjct:  921 LYVGETDSVRDRLKKHGRTYDIG------DALVVTVKDKSAARKAEATALKKLQALGVPLLSTSDASNVHF 985          
BLAST of mRNA_L-elsbetiae_contig6922.15693.1 vs. uniprot
Match: A0A250XJ67_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XJ67_9CHLO)

HSP 1 Score: 55.1 bits (131), Expect = 1.780e-5
Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = 0
Query:  115 WFYVGESDAIRDRLKRHARRWGG----GGKAYKLDAVVVAAENRSEARRLETAVIRAMKEEGFHLVSDKDGSRTHFSSST 190
            WFY GE+D ++ RLK H+ R        G   +    ++  E +S AR++E+A I+A++++ F LVSD D +   F  ST
Sbjct: 1124 WFYCGETDNVKKRLKDHSTRMPSVCNHRGPGLQFLYTLIGEEAKSRARQIESACIKALRKQNFPLVSDADANHKSFGRST 1203          
BLAST of mRNA_L-elsbetiae_contig6922.15693.1 vs. uniprot
Match: A0A0K6S924_9ALVE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S924_9ALVE)

HSP 1 Score: 53.1 bits (126), Expect = 8.190e-5
Identity = 34/79 (43.04%), Postives = 44/79 (55.70%), Query Frame = 0
Query:  113 GVWFYVGESDAIRDRLKRHARR---WGGG-GKAYKLDAVVVAAENRSEARRLETAVIRAMKEEGFHLVSDKDGSRTHFS 187
            GV  YVGE++A+  RL++H  +   W G    A+ L A    A  RS  RRLE + I  ++  GF L SD DGS  HFS
Sbjct: 1362 GVKLYVGETEALGQRLQQHRSKGPAWKGAPALAWALPAW---AGGRSATRRLEASAIAKLRASGFRLESDHDGSHQHFS 1437          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6922.15693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FNS6_ECTSI3.720e-5557.77N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5K8J3_9PHAE2.200e-5255.07DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A8J2SVM6_9STRA7.000e-639.44Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A250XJ67_9CHLO1.780e-536.25Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A0K6S924_9ALVE8.190e-543.04DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6922contigL-elsbetiae_contig6922:2327..3161 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6922.15693.1mRNA_L-elsbetiae_contig6922.15693.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6922 1596..3188 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6922.15693.1 ID=prot_L-elsbetiae_contig6922.15693.1|Name=mRNA_L-elsbetiae_contig6922.15693.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=191bp
MADAAQVVRRVTGRADCDVIPVDSGYGTPPALEGQSCLYVLRYSSLLDGD
RGDRGAGGRRHPSAEALLPPTGYGDYYAAAAAATTSPAIGEEDARASSSL
SSSPSAPEGEEAGVWFYVGESDAIRDRLKRHARRWGGGGKAYKLDAVVVA
AENRSEARRLETAVIRAMKEEGFHLVSDKDGSRTHFSSST*
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