prot_L-elsbetiae_contig6901.15671.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6901.15671.1
Unique Nameprot_L-elsbetiae_contig6901.15671.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length326
Homology
BLAST of mRNA_L-elsbetiae_contig6901.15671.1 vs. uniprot
Match: A0A6H5KX61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX61_9PHAE)

HSP 1 Score: 392 bits (1006), Expect = 8.990e-131
Identity = 212/324 (65.43%), Postives = 242/324 (74.69%), Query Frame = 0
Query:    4 RRLEPVVRRAGVCQRAAALACHAIAQCAGAGRSGGXXXXXXXXXXXXAVQRRKPRMMGMGVTQAARVLKQAL--ESDPRKWEVGQIDEGFRLSHGAKAQAASALLALLEGRDGEVAAESESSIVEWAQNLGPKDRLSTPLPLLMSVTGLLSRPPAHVINLARRPYRWRAVSDVARREGVLLHRHAAVDSLGVEASSSWTGAAAGGGKGFISDKDVATSWATELNTMHDKDCQKATTVDMHPSERACAASHLDLWKRHKLCKLAPFMPEVHPDAVLILEDDARLQPGFLKCAKAAMLQAAAMDRDPKTKKVGLKKKWDVIYLGHM 325
            RRL P +RR GVCQRAAALACH +AQCA AGR                   R  R + M    AAR L  AL  +S+  KWE GQ+DE  +L  GA+AQAASALL+LLEGR GE AAESE SIVEWAQ L P++RLS PLPLL+S+T  LSRPPAHVINLARRP+RW+AVSD ARR+GV LHRH AVD   VEASS          KG+ISDK+VA +WATELNT++DKDC+K TT  MHPSERACAASHLDLW+RH+  KLAPFMPEVHPDAVLILEDDA+L+PGFLK AKA MLQAAAMD   K K +GL K+WD+IYLGH+
Sbjct:   22 RRLVPAIRRPGVCQRAAALACHVLAQCAAAGRGSSRGRAV-----------RSARGLDMFAANAARALMDALRPDSEAEKWEAGQLDEDVKLPFGARAQAASALLSLLEGRYGESAAESERSIVEWAQRLKPEERLSAPLPLLLSITATLSRPPAHVINLARRPFRWKAVSDSARRQGVWLHRHEAVDWKAVEASSM-------SAKGWISDKEVALTWATELNTIYDKDCEKETTHVMHPSERACAASHLDLWRRHRDSKLAPFMPEVHPDAVLILEDDAKLEPGFLKAAKATMLQAAAMDTVRKKKSIGLSKEWDIIYLGHI 327          
BLAST of mRNA_L-elsbetiae_contig6901.15671.1 vs. uniprot
Match: D8LCR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR1_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 1.320e-122
Identity = 212/326 (65.03%), Postives = 244/326 (74.85%), Query Frame = 0
Query:    4 RRLEPVVRRAGVCQRAAALACHAIAQCAGAGR--SGGXXXXXXXXXXXXAVQRRKPRMMGMGVTQAARVLKQAL--ESDPRKWEVGQIDEGFRLSHGAKAQAASALLALLEGRDGEVAAESESSIVEWAQNLGPKDRLSTPLPLLMSVTGLLSRPPAHVINLARRPYRWRAVSDVARREGVLLHRHAAVDSLGVEASSSWTGAAAGGGKGFISDKDVATSWATELNTMHDKDCQKATTVDMHPSERACAASHLDLWKRHKLCKLAPFMPEVHPDAVLILEDDARLQPGFLKCAKAAMLQAAAMDRDPKTKKVGLKKKWDVIYLGHM 325
            RRL   +RR GVCQRAAALACH +AQCA AGR  SGG                R  R + M    AAR L  AL  +S+  KWE GQ+DE  +L  GA+AQAASALL+LLEGR GE AAESE +IVEWAQ L P++RLS PLPLL+S+T  LSRPPAHVINLARRP+RW+AVSD ARR+GV LHRH AVD   VEASS          KG+ISDK+VA +WATELNT++DKDC+K TT  MHPSERACAASHLDLW+RH+  KLAPFMPEVHPDAVLILEDDA+L+PGFL+ AKA MLQAAAMD   K K +GL K+WD+IYLGH+
Sbjct:  595 RRLVLAIRRPGVCQRAAALACHVLAQCAAAGRGSSGGRVV-------------RSARGLDMRAANAARALMDALRPDSEAEKWEAGQLDEDVKLPFGARAQAASALLSLLEGRYGESAAESERTIVEWAQRLKPEERLSAPLPLLLSITATLSRPPAHVINLARRPFRWKAVSDSARRQGVWLHRHEAVDWKAVEASSM-------SAKGWISDKEVALTWATELNTIYDKDCEKETTHVMHPSERACAASHLDLWRRHRDSKLAPFMPEVHPDAVLILEDDAKLEPGFLEAAKATMLQAAAMDTVRKKKSIGLSKEWDIIYLGHI 900          
BLAST of mRNA_L-elsbetiae_contig6901.15671.1 vs. uniprot
Match: A0A7S3JY73_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JY73_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.610e-9
Identity = 80/259 (30.89%), Postives = 113/259 (43.63%), Query Frame = 0
Query:   77 SDPRKWEVGQIDEGFRLSH-GAKAQAASALLALLEGRDGEVAAESESSIVEWAQNLGPKDRLSTPLPLLMSVTGLLSRPPAHVINLARRPYRWRAVSDVARREGVLLHRHAAVDSLGVEASSSWTGAAAGGGKGFISDKDVATSW---ATELNTMHD---KDCQKATTVDMHPSERACAASHLDLWKR----HKLCKLAPFMPEVHPDAVLILEDDARLQPGFLKCAKAAMLQAAAMDRDPKTKKVGLKKKWDVIYLGH 324
            +DP    VG+    F ++H  +  +AASAL A L G + +    S ++++ WA      D+   P  L+  +  L  RP A  +NLA+   R RA++ +A    + L R  A D   V   SS                 V+  W   A  LN   D   +  Q AT+V M PSER CAASH++LW +    HK               VLILEDD  L P F +   AA+   AA+  D            D++ LG+
Sbjct:  548 ADPLDTLVGEA-RAFLMNHLDSSWEAASALAACLNGLEND---GSTTALLNWAHTTFSSDK-ELPPALMRKLAALQRRPLARFLNLAQATDRQRAMARLALVTNLALERIEAFDGNIVTIPSS----------------RVSFYWSEAARSLNAKFDTSSRGTQVATSVPMSPSERGCAASHIELWGKAARDHK--------------PVLILEDDIVLAPQFNQRYAAAL---AALPDDV-----------DILLLGY 757          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6901.15671.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KX61_9PHAE8.990e-13165.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCR1_ECTSI1.320e-12265.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3JY73_9STRA3.610e-930.89Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002654Glycosyl transferase, family 25PFAMPF01755Glyco_transf_25coord: 158..298
e-value: 1.0E-5
score: 25.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6901contigL-elsbetiae_contig6901:1086..10517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6901.15671.1mRNA_L-elsbetiae_contig6901.15671.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6901 1086..10517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6901.15671.1 ID=prot_L-elsbetiae_contig6901.15671.1|Name=mRNA_L-elsbetiae_contig6901.15671.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=326bp
PRRRRLEPVVRRAGVCQRAAALACHAIAQCAGAGRSGGNGSGGGGGGGGG
AVQRRKPRMMGMGVTQAARVLKQALESDPRKWEVGQIDEGFRLSHGAKAQ
AASALLALLEGRDGEVAAESESSIVEWAQNLGPKDRLSTPLPLLMSVTGL
LSRPPAHVINLARRPYRWRAVSDVARREGVLLHRHAAVDSLGVEASSSWT
GAAAGGGKGFISDKDVATSWATELNTMHDKDCQKATTVDMHPSERACAAS
HLDLWKRHKLCKLAPFMPEVHPDAVLILEDDARLQPGFLKCAKAAMLQAA
AMDRDPKTKKVGLKKKWDVIYLGHM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002654Glyco_trans_25