prot_L-elsbetiae_contig6864.15623.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6864.15623.1
Unique Nameprot_L-elsbetiae_contig6864.15623.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length334
Homology
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BLAST of mRNA_L-elsbetiae_contig6864.15623.1 vs. uniprot
Match: A0A6H5JA21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA21_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 2.210e-38
Identity = 153/359 (42.62%), Postives = 176/359 (49.03%), Query Frame = 0 
Query:   16 ADPSARVANPPPRSTPLHSACRSTRLEAVEVLLRGGADETLGDLTPXXSSPLAAAQXXXXXXXXXXXXXXXXRPSTTPLGVVGIGNLGSGQDPTQRGPTETAAEFARRRDPQTMEAIRQALRNAPADRTWRRRSWLVMLRASAEAEASARATREKWELSSMTGSLVRMIGSGLVLGDNRGSGGGKQG----QREGDGHGXXXGM-------------KQEAAGGTAVGRXXXXXXXXXXRVVNGKGKGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAAHD-----------GECG-------------DGGEDESVAELRFLCGRLFDLAAVEEGAFRRVLSYL 333
            ADPSAR+A PPPRST                               XXS   A +                  PSTTP+GVVG+G+ G  +DPT R P E+AAE ARRRDPQTMEAIR ALRNAPADR WRRRSWLVMLRASAEAEA+A+ATR+KWELSSM GS+V +I + LVLG+     G K      +R   G GXXX               +   A       XXXXXXXXXX   +G    A X   XXXXXX                             A   H+           GE G             DGG+ +    LR+LCGRLFDLAAVEEGAFR V+ +L
Sbjct:  381 ADPSARIAYPPPRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQLPAPSNAPPP-------------PSTTPIGVVGLGHCGRDEDPTLRLPAESAAEHARRRDPQTMEAIRMALRNAPADRAWRRRSWLVMLRASAEAEAAAKATRKKWELSSMAGSVVDLIDNRLVLGETSREKGAKDAVDKKERVTGGAGXXXXXXXXXXXXXXXXXAEDATAXXXXXXXXXXXXXXXXXXXXDGDEAAAXXKREXXXXXXGVAAEEACAREGPAKETPPAAHREGAHLDADGGHNSSREEETAVVVGEQGEGRGQAREGAAGDDGGDGKGARVLRWLCGRLFDLAAVEEGAFRNVVLFL 726
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BLAST of mRNA_L-elsbetiae_contig6864.15623.1 vs. uniprot
Match: D7FPM3_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM3_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 3.250e-38
Identity = 125/287 (43.55%), Postives = 149/287 (51.92%), Query Frame = 0 
Query:   89 PSTTPLGVVGIGNLGSGQDPTQRGPTETAAEFARRRDPQTMEAIRQALRNAPADRTWRRRSWLVMLRASAEAEASARATREKWELSSMTGSLVRMIGSGLVLGDNRGSGGGKQGQREGDGHGXXXGMKQEAAGGTAVGRXXXXXXXXXX-------------------------------RVVNGKGKGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAAHD-----GECGDG------GEDESVAELRFLCGRLFDLAAVEEGAFRRVLSYL 333
            PSTTP+GVVG+GN G  +DPT R  TE+AAE ARRRDPQTMEAIR ALRNAPADR WRRRSWLVMLR SAEAEA+A+ATR+KWELSSM GS+V +IG+ LVLG+     G +QG ++          ++   GG     XXXXXXXXXX                               R  +    G                                         A  A +     GE G+G      G+ +    LR+LCGRLFDLAAVEEGAFR V+ +L
Sbjct:  408 PSTTPVGVVGLGNCGRDEDPTLRLTTESAAEHARRRDPQTMEAIRMALRNAPADRAWRRRSWLVMLRVSAEAEAAAKATRKKWELSSMAGSVVDLIGNRLVLGEA----GREQGAKD------AVDKEERVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDKAAXXXXREGDEAPSGVAAEEACAREGSAKEAPPAAHREGAHLDADGGNNGSHGGVTAVVAREQGEAQGEAGEGAGGDDVGDGDGARVLRWLCGRLFDLAAVEEGAFRNVVLFL 684
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6864.15623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JA21_9PHAE2.210e-3842.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPM3_ECTSI3.250e-3843.55Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPFAMPF13606Ank_3coord: 30..53
e-value: 5.0E-4
score: 20.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 27..59
score: 10.179
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..84
e-value: 2.9E-8
score: 35.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..59
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..59
score: 13.124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6864contigL-elsbetiae_contig6864:8353..10185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6864.15623.1mRNA_L-elsbetiae_contig6864.15623.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6864 8353..10185 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6864.15623.1 ID=prot_L-elsbetiae_contig6864.15623.1|Name=mRNA_L-elsbetiae_contig6864.15623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=334bp
GKGSAGLIEDLLRAGADPSARVANPPPRSTPLHSACRSTRLEAVEVLLRG
GADETLGDLTPPPSSPLAAAQAAAAAAAAAAAAAAPPRPSTTPLGVVGIG
NLGSGQDPTQRGPTETAAEFARRRDPQTMEAIRQALRNAPADRTWRRRSW
LVMLRASAEAEASARATREKWELSSMTGSLVRMIGSGLVLGDNRGSGGGK
QGQREGDGHGGGAGMKQEAAGGTAVGRGGGGGGGDGGRVVNGKGKGAEED
DAKRVRRGGAGGAGGETEEDDSVTTGTASATEEAASSACAAHDGECGDGG
EDESVAELRFLCGRLFDLAAVEEGAFRRVLSYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom