prot_L-elsbetiae_contig6835.15596.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6835.15596.1
Unique Nameprot_L-elsbetiae_contig6835.15596.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length88
Homology
BLAST of mRNA_L-elsbetiae_contig6835.15596.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.990e-15
Identity = 42/79 (53.16%), Postives = 50/79 (63.29%), Query Frame = 0
Query:    2 PNTRSSKARISSRVPAVRALRLTWVLPIEVLVQGTAIELWESLNTVRLWGSV--DSLKSVVWPPNLKQLFLGHSFNRPI 78
            PNT+SSK R+ SRVP VRALRLTW   +E LVQ  AIELW     + + G +   SL SVVWP  L QL L   F+ P+
Sbjct:   74 PNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHIPM 152          
BLAST of mRNA_L-elsbetiae_contig6835.15596.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 2.270e-12
Identity = 46/86 (53.49%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    1 RPNTRSSKARISSRVPAVRALRLTWVLPIEVLVQGTAIELWESLNTVRLWGS--VDSLKS-VVWPPNLKQLFLGHSFNRPIAGVVW 83
            RPNTRS    ISSRVP VRALRLTW L +E L++  AIELW     + L GS  V SL S VVWP  L QL L ++ +    G VW
Sbjct:   75 RPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVL-YTDSDIAMGTVW 159          
BLAST of mRNA_L-elsbetiae_contig6835.15596.1 vs. uniprot
Match: A0A6H5KXY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXY5_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 7.060e-6
Identity = 38/82 (46.34%), Postives = 46/82 (56.10%), Query Frame = 0
Query:    7 SKARISSRVPAVRALRLTWVLPIEVLVQGTAIELW-ESLNTVRLWGSVDSLK--------SVVWPPNLKQLFLGHSFNRPIA 79
            +K  ISSRVP VRA RLT  L +E L++  A+ELW  S    RL   V S           VVWP +L+QL LG  F +PIA
Sbjct:  202 TKVLISSRVPVVRAHRLTRALSMEPLLRRAAVELWCRSAYRRRLVAGVPSTAFVRVLLQAEVVWPASLQQLSLGREF-QPIA 282          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6835.15596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7F9_ECTSI1.990e-1553.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LIJ3_9PHAE2.270e-1253.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXY5_9PHAE7.060e-646.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6835contigL-elsbetiae_contig6835:2747..3010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6835.15596.1mRNA_L-elsbetiae_contig6835.15596.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6835 2747..3011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6835.15596.1 ID=prot_L-elsbetiae_contig6835.15596.1|Name=mRNA_L-elsbetiae_contig6835.15596.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=88bp
RPNTRSSKARISSRVPAVRALRLTWVLPIEVLVQGTAIELWESLNTVRLW
GSVDSLKSVVWPPNLKQLFLGHSFNRPIAGVVWPASLQ
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