prot_L-elsbetiae_contig68.15559.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig68.15559.1
Unique Nameprot_L-elsbetiae_contig68.15559.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length122
Homology
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BLAST of mRNA_L-elsbetiae_contig68.15559.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.970e-27
Identity = 73/121 (60.33%), Postives = 82/121 (67.77%), Query Frame = 0 
Query:    3 DNSFSLHWLRNETGLPVVCSAHCRESRGSGXXXXXXXA-ADGNEDAEAA-LPVRVPAGEEAPMGGSLGLPLRAVVLEFEERGQGRERGAGGASXXXXXXMATATAAVTKSWRSLRPIDLDV 121
            DNSFSLHWLRNETGLPVVCSAH RE+RG  XXXXX     DG +DAEA  +PV+VP G+EAP+  SLG P+RAVVLE EE+G  RE    GA+                SWRSLRPI LDV
Sbjct: 3382 DNSFSLHWLRNETGLPVVCSAHYREARGGXXXXXXSLGLTDGEDDAEATTVPVKVPVGQEAPVAASLGRPVRAVVLELEEKGGEREEEEEGAT----------------SWRSLRPIALDV 3486
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BLAST of mRNA_L-elsbetiae_contig68.15559.1 vs. uniprot
Match: A0A6H5JKL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL9_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 3.060e-16
Identity = 64/134 (47.76%), Postives = 70/134 (52.24%), Query Frame = 0 
Query:    3 DNSFSLHWLRNETGLPVVCSAHCRESRGSGXXXXXXXAADGNEDAEAALPV---------------RVPAGEEAPMGGSLGLPLRAVVLEFEERGQGRERGAGGASXXXXXXMATATAAVTKSWRSLRPIDLDV 121
            DNSFSLHWLRNETGLPVVCSAH RE RG  XXXXXXX                             +VP G+EAP+  SLG P+RAVVLE EE+                  +     A T SWRSLRPI LDV
Sbjct: 2518 DNSFSLHWLRNETGLPVVCSAHYREPRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVPVGQEAPVAASLGRPVRAVVLELEEK---------------DGEVEEEEEAAT-SWRSLRPIALDV 2635
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig68.15559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LP20_ECTSI1.970e-2760.33Vacuolar protein sorting-associated protein, putat... [more]
A0A6H5JKL9_9PHAE3.060e-1647.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig68contigL-elsbetiae_contig68:44319..44684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig68.15559.1mRNA_L-elsbetiae_contig68.15559.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig68 44319..44686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig68.15559.1 ID=prot_L-elsbetiae_contig68.15559.1|Name=mRNA_L-elsbetiae_contig68.15559.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
GGDNSFSLHWLRNETGLPVVCSAHCRESRGSGSGGGGRGAADGNEDAEAA
LPVRVPAGEEAPMGGSLGLPLRAVVLEFEERGQGRERGAGGASEASAAGM
ATATAAVTKSWRSLRPIDLDVV
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