prot_L-elsbetiae_contig68.15555.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig68.15555.1
Unique Nameprot_L-elsbetiae_contig68.15555.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length634
Homology
BLAST of mRNA_L-elsbetiae_contig68.15555.1 vs. uniprot
Match: A0A6H5K807_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K807_9PHAE)

HSP 1 Score: 632 bits (1629), Expect = 1.380e-218
Identity = 380/680 (55.88%), Postives = 430/680 (63.24%), Query Frame = 0
Query:    1 MWRKYSTHHIQRGDVTAVVWGAPGAAPADESGAGGGTVGDDTCPESPRSTARAAVIDTESLTRGRRSENPFVQQCDLIFPLPDQASFDGDAGVLDKEEVRSTKASDRYGAERQAEAFVARTLGEAFYYRARGPLSALLREPFLGACILKGGFSALALNAPSDQGNSFAILPSGVLVLSLDRESFQARQGISLLSSSNRQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSSIDLSSKAFRPGKPLHDRVLSCLGGAPGSGGDGEGVAVDMVV--CSWGEAGGGSDLKGXXXXXXRGGRK---------CGRSEQEAALGGEEVAESAAAGSDGTASRKGGRGEAEREREQCCREVTFPPGFSAERVDLTPDTCFFKQACCPDLNFVGQGLAATATT-----------------------------GDDSGQQGGQAS---HP--PPKPPSLPGSTKCRLVLDLFEWLGAVSCGLDAAISREPSPPEPYLSKFEAPCHLRYRRNRVVCRARLRGFLPPLAVARLVKAA--SXXXXXXXXXXXXXVHGGESGGRSGSLLSPARDTRQPEEPPPDGSSWGSVTAWPFRDAPRAYPGADAPCAGGQRAKRGGGGRGXXXXSXGGIGRKGVAERSTKEWPVGGHGVYAVVACPGETAVAYVSARCPGPGW 633
            MW+ +S H+ QRGDVTAVVWGAPGA PA          G+ T    P S A A  +D E+LTRGRR++ PF+QQCDL+FPLPDQ   DG++   D  + +  +   R   E +A+AFV R LG+ FYYRARGPLS LLRE FL + +LKGGFSALALNAPSD GNSFAILP GVLVLSLDRESFQA        S +   + LPGEAA TRP GK KRAGAGAGSTGGS GVLGG AGGPDRYVS++DLS+K+FRPGKPLHDRVLSCL       GD +G AVDMVV  C  G  G GS   G        G           CG+    AA+G     E A    +G  S            +QCCR++TFPPGFSAERVDLTPD  FF++ACCPDL+FVGQGLAATA T                             G D G      +   HP  PP   S P S KC LVLD+FEWLGAVSCGLDAA+ R PSPPEPYLSKFE P HLRYRR+RVVCRARLRGFLPP+AV+R V AA  +                G     S  LL   R  R   +  PDG SWG+VT+WPFRDAPRAYPGADAPCAGGQR+KRG         +  G G  G  ER  KEWPVGGHGVY VVACPGETAVA+VSA+CPGPGW
Sbjct:    1 MWQDFSAHNTQRGDVTAVVWGAPGARPA---------TGESTATVRPSSAAGA--VDAEALTRGRRADTPFIQQCDLVFPLPDQ---DGESDGHDHGDTQERQQK-RLEMEERAKAFVVRALGKTFYYRARGPLSVLLRERFLDSYVLKGGFSALALNAPSDHGNSFAILPGGVLVLSLDRESFQA--------SISGFRICLPGEAAATRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKPLHDRVLSCLSSCRWGSGD-DGAAVDMVVHWCGSGGVGQGSGEGGELAEAESSGTSEASGQAPEGCGQG--AAAVGRRPKGECAEGKQEGQQS------------QQCCRDITFPPGFSAERVDLTPDIRFFREACCPDLDFVGQGLAATAPTTVQRARRKGRKGIEATAFNSTSTAENLVDGSDDGGSDDHFTDRRHPRLPPPVASQPESAKCLLVLDMFEWLGAVSCGLDAAVRRSPSPPEPYLSKFETPRHLRYRRDRVVCRARLRGFLPPVAVSRFVDAAGSAAAGVAALASAEDSAADGRQHYESPQLLPVRRVVRDQGQQRPDGCSWGAVTSWPFRDAPRAYPGADAPCAGGQRSKRG---------ARKGRGGGGSEERCAKEWPVGGHGVYTVVACPGETAVAFVSAKCPGPGW 633          
BLAST of mRNA_L-elsbetiae_contig68.15555.1 vs. uniprot
Match: A0A835ZFG0_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFG0_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.120e-26
Identity = 114/400 (28.50%), Postives = 151/400 (37.75%), Query Frame = 0
Query:  163 QGNSFAILPSGVLVLSLDRESFQARQGISLLSSSNRQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSSIDLSSKAFRPGKPLHDRVLSCLGGAPGSGGDGEGVAVDMVVCSWGEAGGGSDLKGXXXXXXRGGRKCGRSEQEAALGGEEVAESAAAGSDGTASRKGGRGEAEREREQCCREVTFPPGFSAERVDLTPDTCFFKQACCPDLNFVGQGLAATATTGDDSGQQGGQASHPPPKPPSLPGSTKCRLVLDLFEWLGAVSCGLDAAISREPSPPEPYLSKFEAPCHLRYRRNRV-VCRARLRGFLPPLAVARLVKAASXXXXXXXXXXXXXVHGGESGGRSGSLLSPARDTRQPEEPPPDGSSWGSVTAWPFRDAPRAYPG 561
            +G +FA+LP G LV SLDRE+FQ              TLGLP +A   RP   ++R G                   P RY  S DL SK+FRPGKPLHDR++ CL  A G+       A  M+V   G AG                                                                  FP   +A RV + P    F++ CCP L          A T                  P+LP   +CRL+ D+F WLG V+CGL+  ++R P   EPY+S FE P  L Y  +   VCR RLRG +P +  AR   AA                  ++   + + +  A+ T           +W +VT W F+D P    G
Sbjct:   18 RGATFAVLPGGKLVYSLDREAFQ--------------TLGLPAKA--VRPASTSRRPGGDK----------------PRRYFGSADLHSKSFRPGKPLHDRLVQCL--AKGA------RAETMLVWDGGGAG-----------------------------------------------------------------AFPASLAATRVAMEPHARVFQRVCCPQLRRA-------ALT------------------PALPPRERCRLIADMFAWLGVVACGLEDLLARPPL--EPYVSSFEVPAGLAYGGSGARVCRVRLRGLIP-VQYARTRAAAVTPTSAALHVLRLCSKAAQAAAATAADI--AKTT----------GAWAAVTTWGFQDCPGVVDG 272          
BLAST of mRNA_L-elsbetiae_contig68.15555.1 vs. uniprot
Match: A0A0L0HUD1_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HUD1_SPIPD)

HSP 1 Score: 68.2 bits (165), Expect = 1.490e-8
Identity = 46/143 (32.17%), Postives = 68/143 (47.55%), Query Frame = 0
Query:  126 FYYRARGPLSALLREPFLGACILKGGFSALALNAPSDQGNSFAILPSGVLVLSLDRESFQARQGISLLSSSNRQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSSIDLSSKAFRPGKPLHDRVLSCL 268
            FYY+A  PLS  ++  F+   I KGGF+AL  NA +D  ++FA+LPSG LV+S+ +++++              TLGL G  +    KG                          +RY   IDL+  AF+P   L++RV  C 
Sbjct:   61 FYYKASVPLSFFIQPDFVNNYIRKGGFTALRSNAKADIDDTFALLPSGRLVMSVKKDTYE--------------TLGLVGRPSKFGDKG--------------------------NRYFIHIDLAQPAFKPKGKLYERVKWCF 163          
BLAST of mRNA_L-elsbetiae_contig68.15555.1 vs. uniprot
Match: A0A8C4PW73_EPTBU (Ribonuclease P/MRP 40 subunit n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4PW73_EPTBU)

HSP 1 Score: 63.9 bits (154), Expect = 3.320e-7
Identity = 48/144 (33.33%), Postives = 70/144 (48.61%), Query Frame = 0
Query:  127 YYRARG-PLSALLREPFLGACILKGGFSALALNAPSDQGNSFAILPSGVLVLSLDRESFQARQGISLLSSSNRQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSSIDLSSKAFRPGKPLHDRVLSCLG 269
            YY  RG PL+ALL+E F+   + +G   AL+ +   DQ +SFA+LP G L+LSL +++++              TLGL G     +P   A R                     P  YV +IDL+S  F+ GK  ++RV+  LG
Sbjct:   63 YYLVRGLPLTALLQEDFIERFVRRGSVCALSYDTRIDQDDSFALLPPGSLLLSLQKDTYE--------------TLGLQG-----KPSVYAGRK--------------------PLHYVVNIDLTSPTFKSGKKNYERVIWALG 167          
BLAST of mRNA_L-elsbetiae_contig68.15555.1 vs. uniprot
Match: A0A6P8F3B9_CLUHA (ribonuclease P protein subunit p40 isoform X1 n=2 Tax=Clupea harengus TaxID=7950 RepID=A0A6P8F3B9_CLUHA)

HSP 1 Score: 60.1 bits (144), Expect = 5.850e-6
Identity = 46/143 (32.17%), Postives = 68/143 (47.55%), Query Frame = 0
Query:  127 YYRARG-PLSALLREPFLGACILKGGFSALALNAPSDQGNSFAILPSGVLVLSLDRESFQARQGISLLSSSNRQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSSIDLSSKAFRPGKPLHDRVLSCL 268
            YYR R  P+  LL E FL   + KG F AL+ N   D+ N+ A LPSG L+LS+D+++++               LGL G+  P++ K +                VL        RYV +IDL+ K   PG   + R+++ L
Sbjct:   64 YYRVRDLPIYKLLEEEFLEKVVKKGQFYALSYNTRIDEDNTIAFLPSGQLILSVDKDTYEQ--------------LGLEGK--PSQYKHRK---------------VL--------RYVVTIDLTDKLMSPGAKRYQRLITSL 167          
BLAST of mRNA_L-elsbetiae_contig68.15555.1 vs. uniprot
Match: A0A673H2N4_9TELE (Ribonuclease P/MRP 40 subunit n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673H2N4_9TELE)

HSP 1 Score: 58.9 bits (141), Expect = 1.210e-5
Identity = 45/143 (31.47%), Postives = 66/143 (46.15%), Query Frame = 0
Query:  127 YYRARG-PLSALLREPFLGACILKGGFSALALNAPSDQGNSFAILPSGVLVLSLDRESFQARQGISLLSSSNRQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSSIDLSSKAFRPGKPLHDRVLSCL 268
            YY  R  P+  LL E FL + + KG F+AL+ N   D+ NS A+L SG L+LSLD+++++               LGL G  +    + KA R                        +V ++DL+ K+  PG   + RVLS L
Sbjct:   64 YYLVRDLPVYELLEESFLESLVKKGNFNALSYNTKIDEDNSIALLSSGQLILSLDKDTYEQ--------------LGLEGRPSLYNHR-KAMR------------------------FVVTLDLTDKSLTPGTKRYQRVLSSL 167          
BLAST of mRNA_L-elsbetiae_contig68.15555.1 vs. uniprot
Match: A0A672SZS8_SINGR (Ribonuclease P/MRP subunit p40 n=3 Tax=Cyprinidae TaxID=7953 RepID=A0A672SZS8_SINGR)

HSP 1 Score: 57.8 bits (138), Expect = 2.880e-5
Identity = 45/143 (31.47%), Postives = 65/143 (45.45%), Query Frame = 0
Query:  127 YYRARG-PLSALLREPFLGACILKGGFSALALNAPSDQGNSFAILPSGVLVLSLDRESFQARQGISLLSSSNRQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSSIDLSSKAFRPGKPLHDRVLSCL 268
            YY  R  P+  LL E FL + + KG F AL+ N   D+ N+ A+L SG L+LSLD+++++               LGL G  +    K KA R                        +V ++DL+ K+  PG   + RVLS L
Sbjct:   41 YYLVRDLPVYQLLEETFLESLVKKGNFYALSYNTKIDEDNAIALLSSGQLILSLDKDTYEQ--------------LGLEGRPSLYNHK-KAMR------------------------FVVTLDLTDKSLTPGTKRYQRVLSSL 144          
BLAST of mRNA_L-elsbetiae_contig68.15555.1 vs. uniprot
Match: A0A672T000_SINGR (Ribonuclease P/MRP subunit p40 n=23 Tax=Cyprinoidei TaxID=30727 RepID=A0A672T000_SINGR)

HSP 1 Score: 57.8 bits (138), Expect = 3.210e-5
Identity = 45/143 (31.47%), Postives = 65/143 (45.45%), Query Frame = 0
Query:  127 YYRARG-PLSALLREPFLGACILKGGFSALALNAPSDQGNSFAILPSGVLVLSLDRESFQARQGISLLSSSNRQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSSIDLSSKAFRPGKPLHDRVLSCL 268
            YY  R  P+  LL E FL + + KG F AL+ N   D+ N+ A+L SG L+LSLD+++++               LGL G  +    K KA R                        +V ++DL+ K+  PG   + RVLS L
Sbjct:   64 YYLVRDLPVYQLLEETFLESLVKKGNFYALSYNTKIDEDNAIALLSSGQLILSLDKDTYEQ--------------LGLEGRPSLYNHK-KAMR------------------------FVVTLDLTDKSLTPGTKRYQRVLSSL 167          
BLAST of mRNA_L-elsbetiae_contig68.15555.1 vs. uniprot
Match: A0A6P8Q5W0_GEOSA (ribonuclease P protein subunit p40 isoform X1 n=5 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8Q5W0_GEOSA)

HSP 1 Score: 57.8 bits (138), Expect = 3.210e-5
Identity = 44/143 (30.77%), Postives = 65/143 (45.45%), Query Frame = 0
Query:  127 YYRARG-PLSALLREPFLGACILKGGFSALALNAPSDQGNSFAILPSGVLVLSLDRESFQARQGISLLSSSNRQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSSIDLSSKAFRPGKPLHDRVLSCL 268
            YY  +  P+   +   F+   I KG F AL+ N   DQ N+ A+LP+G L+LS+D+++++               LGL G+  P+R  GK                V+        RY+ +IDL+  AF P    H RVL  L
Sbjct:   64 YYLVKDLPIHEFVSHDFISIFIKKGAFYALSYNTKIDQDNTVAVLPTGKLILSVDKDTYEE--------------LGLQGK--PSRYSGKK---------------VM--------RYIVTIDLTDAAFLPDTKKHKRVLWAL 167          
BLAST of mRNA_L-elsbetiae_contig68.15555.1 vs. uniprot
Match: UPI001C08801F (ribonuclease P protein subunit p40 n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C08801F)

HSP 1 Score: 57.0 bits (136), Expect = 5.660e-5
Identity = 44/143 (30.77%), Postives = 67/143 (46.85%), Query Frame = 0
Query:  127 YYRARG-PLSALLREPFLGACILKGGFSALALNAPSDQGNSFAILPSGVLVLSLDRESFQARQGISLLSSSNRQTLGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSSIDLSSKAFRPGKPLHDRVLSCL 268
            YYR R  PL  LL E  +   + KG F AL+ N   D+ N+ A LP+G L+LS+D+++++               LGL G+  P++ K +                VL        RYV ++DL+ K   PG   H R+++ L
Sbjct:   64 YYRVRDLPLYKLLEENVIEKVVKKGHFYALSYNTRIDEDNTIAFLPTGQLILSVDKDTYEQ--------------LGLEGK--PSQYKHRK---------------VL--------RYVVTVDLTDKLMSPGAKGHQRLMTSL 167          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig68.15555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5K807_9PHAE1.380e-21855.88Cyclic nucleotide-binding domain-containing protei... [more]
A0A835ZFG0_9STRA3.120e-2628.50Ribonuclease P n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A0L0HUD1_SPIPD1.490e-832.17Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A8C4PW73_EPTBU3.320e-733.33Ribonuclease P/MRP 40 subunit n=2 Tax=Eptatretus b... [more]
A0A6P8F3B9_CLUHA5.850e-632.17ribonuclease P protein subunit p40 isoform X1 n=2 ... [more]
A0A673H2N4_9TELE1.210e-531.47Ribonuclease P/MRP 40 subunit n=1 Tax=Sinocycloche... [more]
A0A672SZS8_SINGR2.880e-531.47Ribonuclease P/MRP subunit p40 n=3 Tax=Cyprinidae ... [more]
A0A672T000_SINGR3.210e-531.47Ribonuclease P/MRP subunit p40 n=23 Tax=Cyprinoide... [more]
A0A6P8Q5W0_GEOSA3.210e-530.77ribonuclease P protein subunit p40 isoform X1 n=5 ... [more]
UPI001C08801F5.660e-530.77ribonuclease P protein subunit p40 n=1 Tax=Alosa s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013893Ribonuclease P, Rpp40PFAMPF08584Ribonuc_P_40coord: 136..186
e-value: 1.6E-8
score: 34.2
coord: 428..556
e-value: 2.6E-8
score: 33.5
IPR013893Ribonuclease P, Rpp40PANTHERPTHR15396FAMILY NOT NAMEDcoord: 67..559

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig68contigL-elsbetiae_contig68:2047..4355 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig68.15555.1mRNA_L-elsbetiae_contig68.15555.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig68 2047..4355 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig68.15555.1 ID=prot_L-elsbetiae_contig68.15555.1|Name=mRNA_L-elsbetiae_contig68.15555.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=634bp
MWRKYSTHHIQRGDVTAVVWGAPGAAPADESGAGGGTVGDDTCPESPRST
ARAAVIDTESLTRGRRSENPFVQQCDLIFPLPDQASFDGDAGVLDKEEVR
STKASDRYGAERQAEAFVARTLGEAFYYRARGPLSALLREPFLGACILKG
GFSALALNAPSDQGNSFAILPSGVLVLSLDRESFQARQGISLLSSSNRQT
LGLPGEAAPTRPKGKAKRAGAGAGSTGGSAGVLGGGAGGPDRYVSSIDLS
SKAFRPGKPLHDRVLSCLGGAPGSGGDGEGVAVDMVVCSWGEAGGGSDLK
GGGGAATRGGRKCGRSEQEAALGGEEVAESAAAGSDGTASRKGGRGEAER
EREQCCREVTFPPGFSAERVDLTPDTCFFKQACCPDLNFVGQGLAATATT
GDDSGQQGGQASHPPPKPPSLPGSTKCRLVLDLFEWLGAVSCGLDAAISR
EPSPPEPYLSKFEAPCHLRYRRNRVVCRARLRGFLPPLAVARLVKAASAA
AAAAAAAATTEVHGGESGGRSGSLLSPARDTRQPEEPPPDGSSWGSVTAW
PFRDAPRAYPGADAPCAGGQRAKRGGGGRGRKGGSGGGIGRKGVAERSTK
EWPVGGHGVYAVVACPGETAVAYVSARCPGPGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013893RNase_P_Rpp40