prot_L-elsbetiae_contig6791.15548.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig6791.15548.1
Unique Name	prot_L-elsbetiae_contig6791.15548.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	488

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig6791.15548.1 vs. uniprot
Match: D8LDU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU9_ECTSI)

HSP 1 Score: 751 bits (1940), Expect = 1.030e-246
Identity = 412/490 (84.08%), Postives = 431/490 (87.96%), Query Frame = 0

Query:    8 GVTAGNGGGVG-GDLVRKEMYLVKWKNLSYLHNSWEMSKHLEDARHPSNRQKLLRYKNKMEQEHGLQWRKVLEDEDREEEGEGATVEKEYFPADMVEVQRIITCEATSTRHEAVLRQERHDILSGDSDSNQARGGXXXXXXXXXXXXXXXXXXXSMVLYLVKWRGLPYDQSSWEHFKDIRFAADQILDFWDFCRPGPKEMAEVEAQLAVGGKGHGGGIRGGGETLKGHNLRVRDFTKLMVSPVFGVTKAEKAAKGSSVGXXXXXXXXXXXXXG--------LTLRDYQLEGVNWLLWNWWNHRSSILADEMGLGKTIQTVGFLDQLWNHKLTGIRGPFCVVGPLSLVAQWQSEKLRSAGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADGRQFFDQSGFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPKAST 488
            GV  G G G G G+ VRKEMYL+KWKNLSYLHNSWEM+ HL+D RHPSNRQKLLR+ NKMEQEHG QWRKV+EDED E   EGA  EKEY+P+DM EVQRI+TCEATST HEAVLR+ERHD+LSGDS +      XXXXXXXXXXXXXX     S+VLYLVKWRGLPYDQ SWEHFKDIRFA+DQILDFWDFCRP P+EMAEV AQL+ GGKG GGG+RGGGE LKGHNLRVRDFTKLM SPVFGVT AEKAAKG    XXXXXXXXXXXXX         LTLRDYQLEGVNWLLWNWWNHRSSILADEMGLGKTIQTVGFLDQLWNHKLT IRGPFC+V PLSLVAQWQSEKLR+AGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFAD  QFFDQ GFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPK  T
Sbjct:  439 GVEGGAGRGAGEGESVRKEMYLIKWKNLSYLHNSWEMAAHLQDPRHPSNRQKLLRFNNKMEQEHGPQWRKVMEDEDAE---EGAA-EKEYYPSDMAEVQRIVTCEATSTAHEAVLRKERHDMLSGDS-AXXXXXXXXXXXXXXXXXXXXDSDPDSLVLYLVKWRGLPYDQCSWEHFKDIRFASDQILDFWDFCRPRPEEMAEVNAQLSAGGKGKGGGVRGGGEALKGHNLRVRDFTKLMTSPVFGVTAAEKAAKGXXXXXXXXXXXXXXXXXXXXXXXXXXLTLRDYQLEGVNWLLWNWWNHRSSILADEMGLGKTIQTVGFLDQLWNHKLTNIRGPFCIVAPLSLVAQWQSEKLRAAGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADSHQFFDQQGFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPKEET 923

[Close]

BLAST of mRNA_L-elsbetiae_contig6791.15548.1 vs. uniprot
Match: A0A6H5KVU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU7_9PHAE)

HSP 1 Score: 593 bits (1530), Expect = 9.010e-189
Identity = 341/529 (64.46%), Postives = 364/529 (68.81%), Query Frame = 0

Query:    1 MDVDDGAGVTAGNGGGVGGDLVRKEMYLVKWKNLSYLHNSWEMSKHLEDARHPSNRQKLLRYKNKMEQEHGLQWRKVLEDEDREEEGEGATVEKEYFPADMVEVQRIITCEATSTRHEAVLRQERHDILSGDSDSNQARGGXXXXXXXXXXXXXXXXXXXSMVLYLVKWRGLPYDQSSWEHFKDIRFAADQILDFWDFCRPGPKEMAEVEAQLAVGGKGHGGGIRGGGETLKGHNLRVRDFTKLMVSPVFGVTKAEKAAKGSSVGXXXXXXXXXXXXXGLTLRDYQLEGVNWLLWNWWNHRSSILADEMGLGKTIQTVGFLDQLWNHKLTGIRGPFCVVGPLSLVAQWQSE-----------------------------------------KLRSAGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADGRQFFDQSGFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPKAST 488
            +DV+ GA   AG G G   +LVRKEMYL+KWKNLSYLHNSWEM+ HL+D RHPSNRQKLLR+ NKMEQEHG QWRKV+EDED E   EGA  EKEY+P+DM EVQRI+TCE+TST HEAVLR+ERHD+LSGDS +      XXXXXXXXXXXXXXX    S+VLYLVKWRGLPYDQ SWEHFKDIRFA+DQILDFWDFCRP P                                                                                    EGVNWLLWNWWNHRSSILADE+GLGKTIQTVGFLDQLWNHKLT IRGPFC+V PLSLVAQWQSE                                         KLR+AGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADG +FFDQ GFKEQFGDLKGSSQVA+LH+MLRPYLLRRVKEDVEKSLPPK  T
Sbjct:  443 VDVEGGARRGAGEGEG---ELVRKEMYLIKWKNLSYLHNSWEMAAHLQDPRHPSNRQKLLRFNNKMEQEHGPQWRKVMEDEDAE---EGAA-EKEYYPSDMAEVQRIVTCESTSTAHEAVLRKERHDMLSGDSAAXXXX--XXXXXXXXXXXXXXXSDPDSLVLYLVKWRGLPYDQCSWEHFKDIRFASDQILDFWDFCRPRP------------------------------------------------------------------------------------EGVNWLLWNWWNHRSSILADEVGLGKTIQTVGFLDQLWNHKLTNIRGPFCIVAPLSLVAQWQSEIATWSPDMNVIVYHGNGTSRAILREREFWHEEPFVTRADAKKLRAAGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADGHRFFDQQGFKEQFGDLKGSSQVARLHDMLRPYLLRRVKEDVEKSLPPKEET 878

[Close]

BLAST of mRNA_L-elsbetiae_contig6791.15548.1 vs. uniprot
Match: A0A448Z3J7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3J7_9STRA)

HSP 1 Score: 344 bits (883), Expect = 1.260e-101
Identity = 213/538 (39.59%), Postives = 280/538 (52.04%), Query Frame = 0

Query:   19 GDLVRKEMYLVKWKNLSYLHNSWEMSKHL--EDARHPSNRQKLLRYKNKMEQEHGLQWRKVLEDEDR----------------EEEGEGATVEKE----YFPADMVEVQRIITCEATSTRHEAVLRQERHDILSGDSDSNQARGGXXXXXXXXXXXXXXXXXXX----SMVLYLVKWRGLPYDQSSWEHFKDIRF-AADQILDFWDFCRPGPKEMAEVEAQLAVGGKGHGGGIRGGGETLKGHNLRVRDFTKLMVSPVFGVTKAEKAAKGSSVGXXXXXXXXXXXXXGLTLRDYQLEGVNWLLWNWWNHRSSILADEMGLGKTIQTVGFLDQLWNHKLTGIRGPFCVVGPLSLVAQWQSE-----------------------------------------KLRSAGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADGRQFFDQSGFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPKAST 488
            G   R+E+YL+KW+  SYLHNSWE    +   D  + + R K+ +Y    E   G+ W+KV+E+E +                + EG+  T ++E    ++P    EV+RI+ C+ +        +Q   +IL       Q   G                         V Y+VKW+GLP+ + +WE++KDI+  A D+  DFW   +P  +E     +Q                      +  ++DF K+  SP FG++K ++     S+                 LR+YQLEGVNWLL+NWWN RS ILADEMGLGKTIQ+VG +  L +   TG+RGPF VV PLSL+ QWQSE                                         KLR     KFHILITTYEV LKDV   ++I WK L+VDEAHRLKN  SKLF+EL S+PRD+ LLLTGTPL N TEELWALL FA+G  F  +  F E+FG L  S QV +LH +L+PYLLRRVKEDVEKS+PPK  T
Sbjct:  483 GATEREEVYLIKWRGKSYLHNSWERGSDIIRTDPTNNTARSKIRKYNQAQEIALGIHWKKVIEEERKASNATALHDPVPATNVDTEGKMDTPQEEPDEEFYPPANTEVERILACDESEMDLSLYAKQRALNILDDQEQMKQKESGTTKLWNSKEGLKEILTEIPWDPEDNVRYVVKWKGLPFAEITWEYWKDIKTDATDEAEDFWIRQQPPDEETLARNSQP---------------------HPHMQDFQKIKESPPFGISKRKRLV-ADSINGQLVPKDVEDEREPFRLRNYQLEGVNWLLFNWWNRRSCILADEMGLGKTIQSVGLIKLLQDTPNTGVRGPFLVVAPLSLIGQWQSEMKSWAPDLHIVLYHGSADARDFLVKNDFFFTDQFVXKATATKLRKQHVTKFHILITTYEVVLKDVDVFTKIKWKALIVDEAHRLKNSSSKLFEELTSVPRDYCLLLTGTPLANATEELWALLKFANGSVFDSKDDFLEKFGQLTDSGQVDQLHAVLKPYLLRRVKEDVEKSMPPKTET 998

[Close]

BLAST of mRNA_L-elsbetiae_contig6791.15548.1 vs. uniprot
Match: A0A7S4QWE4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QWE4_9STRA)

HSP 1 Score: 339 bits (869), Expect = 9.250e-101
Identity = 219/547 (40.04%), Postives = 287/547 (52.47%), Query Frame = 0

Query:   23 RKEMYLVKWKNLSYLHNSWEMSKHLEDARHPSN----RQKLLRYKNKMEQEHGLQWRKVLEDEDR-------EEEGEGAT--------VEKEYFPADMVEVQRIITCEATSTRHEAVLRQERHDILSGDS-----------DSNQARGGXXXXXXXXXXXXXXXXXXXSMVLYLVKWRGLPYDQSSWEHFKDIRFA-ADQILDFWDFCR-PGPKEMAEVEAQLAVGGKGHGGGIRGGGETLKGHNLRVRDFTKLMVSPVFGVTKAEKAA----KGSSVGXXXXXXXXXXXXX----GLTLRDYQLEGVNWLLWNWWNHRSSILADEMGLGKTIQTVGFLDQLWNHKLTGIRGPFCVVGPLSLVAQWQSE-----------------------------------------KLRSAGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADGRQFFDQSGFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPKAST 488
            R+++YLVKW+  S+LH SWE  + LE     SN    R KL RY    E ++G  W+ VLE+E R       +EE +  T        VE+E+F     EV+R++ C+  S    +VL ++R   L  +S           DS   R                       V Y++KW+GL + + +WE++KDI+    DQ+ DFW   R P   E+  +                     L+  + ++ DF KL+ SPV+G++  +++      G  +                  G  LR YQLEGVNWLLWNWWN RS ILADEMGLGKTIQ+V FL +L  H  T +RGPF +V PLSL+AQWQSE                                         KLR     KFH+LITTYEV LKD   LS+I WK L+VDEAHRLKN  S+LF EL ++PRD  +LLTGTPLQN TEELWALL+F+D   F  +  F ++FG L  + QV++LH +L+PYLLRRVKEDVEKSLPPK  T
Sbjct:  396 REDVYLVKWRGKSHLHCSWERKRDLEKMDPSSNTNTARGKLKRYVQSQEVQYGKNWKLVLEEERRVSSVPTKKEENDAPTGDSKEDEIVEEEFFLPTFTEVERVLACDE-SEMDTSVLAKQRALNLKAESEQLRLKEHEKEDSGNDR--TTTSLIPKKEEKEEAWDPEDNVRYVIKWKGLQFQEMTWEYWKDIKHDFVDQVEDFWLRQRAPNTNEVTMI---------------------LERVHPKITDFKKLVTSPVYGLSHTKRSVAKLENGKGISGIKEEDGEKQDVESDENGYRLRAYQLEGVNWLLWNWWNRRSCILADEMGLGKTIQSVCFLQELQRHPNTKVRGPFLIVAPLSLIAQWQSETEAWAPDMNVILYHGSADSRDFLVKQEFYYTDQFLPKTTAVKLRRQHITKFHVLITTYEVVLKDAAVLSKIRWKALIVDEAHRLKNPKSRLFVELATVPRDFCVLLTGTPLQNSTEELWALLHFSDPVAFSSKEAFVDKFGQLTDARQVSELHSVLKPYLLRRVKEDVEKSLPPKEET 918

[Close]

BLAST of mRNA_L-elsbetiae_contig6791.15548.1 vs. uniprot
Match: A0A1Z5JDN6_FISSO (Chromodomain-helicase-DNA-binding protein 6 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDN6_FISSO)

HSP 1 Score: 317 bits (812), Expect = 3.960e-92
Identity = 197/524 (37.60%), Postives = 275/524 (52.48%), Query Frame = 0

Query:   23 RKEMYLVKWKNLSYLHNSWEMSK---HLEDARHPSNRQKLLRYKNKMEQEHGLQWRKV-LEDEDREEEGEGATVE--KEYFPADMVEVQRIITCEAT-------STRHEAVLRQERHDILSGDSDSNQARGGXXXXXXXXXXXXXXXXXXX--SMVLYLVKWRGLPYDQSSWEHFKDI-RFAADQILDFWDFCRPGPKEMAEVEAQLAVGGKGHGGGIRGGGETLKGHNLRVRDFTKLMVSPVFGVTKAEKAAKGSS-VGXXXXXXXXXXXXXGLTLRDYQLEGVNWLLWNWWNHRSSILADEMGLGKTIQTVGFLDQLWNHKLTGIRGPFCVVGPLSLVAQWQSE-----------------------------------------KLRSAGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADGRQFFDQSGFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPKAST 488
            ++E+ L+KW+  S+LH SWE +     L+ + + + R K+ RY  + E   GL W+ + L D +   +  G  +E  +EYF  D +E++RI  C+         + +  A L +E+  +   DS++ +                           V Y+VKW+G+P+ + +WE+++DI R A D+  DFW   +P P +  E+                         +  +R+F KL  S  +G++   +    +                 G  LR YQLEGVNWLL+NWWN RS ILADEMGLGKTIQ+  FL +L     T +R PF +V PLSLV QWQSE                                         KL+     KFH+LITTYEV LKDV  +S+I WK L+VDEAHRLKN  S+LF++L ++PRD  LLLTGTP+ N TEELWALL+FA+   F D+  F E+FG++  + QV +LH +L+PYLLRRVKEDVEKSLPPK  T
Sbjct:  336 KEEVLLIKWRGRSHLHCSWERADDVIRLDSSNNSTARNKIRRYYQEQEASIGLNWKSIMLADRESTTQMHGQFLEPAEEYFGGDCLEIERITACDENEMDMSVLAKQRAANLIEEQETLQKKDSEAIKVSEETLYQHLVKDVDLENDIPWDPEDNVRYVVKWKGMPFTEMTWEYWRDIKRDAVDEAEDFWYRQKP-PNDYRELP------------------------HPHIREFRKLQESAEYGISSRPRLLMNNDGTILKPADDEDDGTSKGFRLRGYQLEGVNWLLFNWWNKRSCILADEMGLGKTIQSAAFLRELQTQSATQVRAPFLIVAPLSLVGQWQSELMSWAPDLNVLLYHGSADAREFLVAHEFYFTDQFIPRPDAIKLKKQHVTKFHVLITTYEVILKDVHMISKIKWKALIVDEAHRLKNSKSRLFEQLANVPRDFCLLLTGTPIANATEELWALLSFANPDVFSDKESFLEKFGEMTDAEQVNELHSLLKPYLLRRVKEDVEKSLPPKEET 834

[Close]

BLAST of mRNA_L-elsbetiae_contig6791.15548.1 vs. uniprot
Match: A0A835Z670_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z670_9STRA)

HSP 1 Score: 291 bits (746), Expect = 7.630e-90
Identity = 151/251 (60.16%), Postives = 174/251 (69.32%), Query Frame = 0

Query:  279 GLTLRDYQLEGVNWLLWNWWNHRSSILADEMGLGKTIQTVGFLDQLWNHKLTGIRGPFCVVGPLSLVAQWQSE-----------------------------------------KLRSAGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADGRQFFDQSGFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPKAST 488
            GL LR+YQLEGVNWLLWNWW+ R SILADEMGLGKTIQT  FL  LW +KLT  RGP  +V PLSLV QWQ E                                          LR AG  KF+++ITT+E+AL++VR+LSR+ W+VLVVDEAHRLKNC SKLFQEL SLPR+H LLLTGTPLQN+TEELWALL+F     F DQ  F +QFGDLK +SQV +LHE+LRP+LLRR+KEDVEKSLPPK  T
Sbjct:   26 GLRLREYQLEGVNWLLWNWWHKRPSILADEMGLGKTIQTTAFLHALWRNKLTANRGPHLIVAPLSLVNQWQGEVDTWSPDMNAVVYHGNAEARDVIREREWWYDAPFVSKEDARDLRRAGVPKFNVMITTFEIALREVRDLSRVAWQVLVVDEAHRLKNCESKLFQELSSLPREHCLLLTGTPLQNKTEELWALLHFCHKDHFNDQRQFLQQFGDLKEASQVGELHEVLRPFLLRRIKEDVEKSLPPKEET 276

[Close]

BLAST of mRNA_L-elsbetiae_contig6791.15548.1 vs. uniprot
Match: A0A4D9D793_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D793_9STRA)

HSP 1 Score: 309 bits (791), Expect = 2.320e-89
Identity = 217/543 (39.96%), Postives = 284/543 (52.30%), Query Frame = 0

Query:   23 RKEMYLVKWKNLSYLHNSWEMSKHL--EDARHPSNRQKLLRYKNKMEQEHGLQWRKVLEDEDREEEGEGATVEKEYFPADMVEVQRIITCEATSTRHEAVLRQ---ERHDILSGDSDSNQARGGXXXXXXXXXXXXXXXXXXXS-----MVLYLVKWRGLPYDQSSWEHFKDIR-FAADQILDFWDFCRPGPKEMAEVEAQLAVGGKGHGGGIRGGGETLKGHNLRVRDFTKLMVSPVFGVTKAE----------------KAAKGSSVGXXXXXXXXXXXXXG---------LTLRDYQLEGVNWLLWNWWNHRSSILADEMGLGKTIQTVGFLDQLWNHKLTGIRGPFCVVGPLSLVAQWQSEK-----------------------------------------LRSAGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADGRQFFDQSGFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPKAST 488
            +++ +LVKWK+ SYLH  WE    L  +D+   S  QKL R++ +M +  G  WR+VL ++ RE   E      ++   ++ EV R+I CE      + ++RQ   +RH +L  +      R G                          V YLVKWRGLPY ++SWE + DI+ FA +++  FW   RP  K    +   +          +        GH    R +T L +    G +  E                  A+G +    XXXXXXXX             L LRDYQL G+ WL++N++  R SILADEMGLGKTIQT+ FL QL+  +    RGPF +V PLSL+ QWQ E                                          L+    +KF IL+TTYE  +KD++ LSRI WKVLVVDEAHRLKN  S+LF EL +LPRDH +LLTGTPLQN+TEELWALLNFAD   F DQ+GF  ++GDLK +SQV  LH ML+P+LLRR+KEDVEKSLPPK  T
Sbjct:  600 KEDYWLVKWKDKSYLHVRWETRAGLLRQDS---SADQKLKRFEKQMVKLRGPAWREVLLEDRRENPKESP----DWIEPEVTEVHRVIACETGYVNLQVLVRQVRRKRHALLVDEQAGEAGRDGAMGQALPVPLPPLTPAEEMENHQHDRVRYLVKWRGLPYAEASWEKWADIKDFAYEEVGLFWVLQRPDLKLNPALAMSMRA--------LHDVENPTFGH----RSYTFLSIYDPDGPSDIELPSAPLAPPXXXXXXXXLAEGGTEEQHXXXXXXXXAQAAAHAASSLSVLQLRDYQLTGLKWLIFNYYQRRPSILADEMGLGKTIQTMAFLTQLYRTQEGKNRGPFIIVAPLSLINQWQGEAGTWAPDLNVLVYHGNTDSRQVLREYEFHFNEPYIRAEEAHYLKQRNILKFDILLTTYETVIKDIKILSRIMWKVLVVDEAHRLKNPASRLFMELRTLPRDHCVLLTGTPLQNKTEELWALLNFADPVHFGDQAGFSREYGDLKDASQVENLHNMLKPFLLRRIKEDVEKSLPPKEET 1123

[Close]

BLAST of mRNA_L-elsbetiae_contig6791.15548.1 vs. uniprot
Match: B8CAT3_THAPS (Chromodomain-helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAT3_THAPS)

HSP 1 Score: 295 bits (754), Expect = 1.160e-88
Identity = 203/513 (39.57%), Postives = 252/513 (49.12%), Query Frame = 0

Query:   23 RKEMYLVKWKNLSYLHNSWEMSKHLEDARHP----SNRQKLLRYKNKMEQEHGLQWRKVLEDEDREEEGEGATVEKEYFPADMVEVQRIITCEATSTRHEAVLRQERHDILSGDSDSNQARGGXXXXXXXXXXXXXXXXXXXSMVLYLVKWRGLPYDQSSWEHFKDI-RFAADQILDFWDFCR-PGPKEMAEVEAQLAVGGKGHGGGIRGGGETLKGHNLRVRDFTKLMVSPVFGVTKAEKAAKGSSVGXXXXXXXXXXXXXGLTLRDYQLEGVNWLLWNWWNHRSSILADEMGLGKTIQTVGFLDQLWNHKLTGIRGPFCVVGPLSLVAQWQSE-----------------------------------------KLRSAGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADGRQFFDQSGFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPKAST 488
            R+E++L+KW+  SY+H SWE  + LE   H     S R K+ RY         +Q      D D++EE        EYF    +EV RI+ C+               D+  G  D                            V Y+V+W+GL   +++WE++ DI R   D++ DFW   + P  K + E+       G  H                  R F KL  SPVF                             L LR YQLEGVNWLLWNW+N RS ILADEMGLGKTIQ++GFL +L        RGPF VV PLSLVAQW SE                                         +L+     KF +LITTYEV LKDV  LS+I WK L+VDEAHRLKN  ++LF++L S+PRD  LLLTGTPLQN TEELWALL+F D + F  +  F EQFG L+ + QVA LH +LRPYLLRRVKEDVEK+LPPK  T
Sbjct:   98 REEVFLIKWRGRSYMHCSWERKRDLEKFDHSTQLGSARGKINRY---------IQ---SSNDSDKDEE--------EYFSPLHLEVDRILGCDENEL-----------DMNDGTWDPEDN------------------------VRYIVRWKGLQLTEATWEYWIDIKRDFVDEVEDFWRRQQAPSDKLVKEIS------GAPH---------------PHPRSFRKLTESPVFDTGSV------------------------LKLRAYQLEGVNWLLWNWYNRRSCILADEMGLGKTIQSIGFLHELQRVPKAKNRGPFLVVAPLSLVAQWASESKEWAPDMNVVVYHGSADARDFLVKHEFYYTDQFSSKTVAQQLKRKHITKFQVLITTYEVVLKDVNVLSKIKWKALIVDEAHRLKNIKARLFEDLASVPRDFCLLLTGTPLQNSTEELWALLHFCDPKTFGSRDEFTEQFGQLENADQVANLHTVLRPYLLRRVKEDVEKALPPKEET 510

[Close]

BLAST of mRNA_L-elsbetiae_contig6791.15548.1 vs. uniprot
Match: A0A2P4YLW4_9STRA (Chromodomain-helicase-DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLW4_9STRA)

HSP 1 Score: 288 bits (737), Expect = 2.560e-86
Identity = 195/498 (39.16%), Postives = 257/498 (51.61%), Query Frame = 0

Query:   27 YLVKWKNLSYLHNSWEMSKHLEDARHPSNRQKLLRYKNKMEQEHGLQWRKVLE-DEDREEEGEGATVEKEYFPADMVEVQRIITCEATSTRHEAVLRQERHDILSGDSDSNQARGGXXXXXXXXXXXXXXXXXXXSMVLYLVKWRGLPYDQSSWEHFKDIRFAADQILDFWDFCRPGPKEMAEVEAQLAVGGKGHGGGIRGGGETLKGH-NLRVRDFTKLMVSPVFGVTKAEKAAKGSSVGXXXXXXXXXXXXXGLTLRDYQLEGVNWLLWNWWNHRSSILADEMGLGKTIQTVGFLDQLWNHKLTGIRGPFCVVGPLSLVAQWQSE------------KLRSAGR----------------------VKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADGRQFFDQSGFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPKAST 488
            YL+KWK  +Y+H SWE  + L +    +N+QK+ R+  K +       R+  + DED       A  E EYF  + +E+ RII                +   +  D +   A                        + Y +KWR L Y++++WE   DI+  A                +A+ +A + V  +          E  K      +R++ KL  SP FG  ++                        L+LR YQLEG+NWLLWNW+N R SILADEMGLGKTIQT+ FL+ L +     IRGPF +V PLSL+ QWQ+E               SA R                       +F+IL+TTYEVA+KD+  LS+IHW+ LVVDEAHRLKN  S+L +++ SL RDH +LLTGTPLQN+TEELWALLNF DGR F   + F E+FGDL  + QVA LH+ML+PYLLRRVKEDVEKSLPPK  T
Sbjct:  252 YLIKWKGFAYMHASWETKQVLLELDPLTNKQKIKRFHEKEQHRLHHPHRQTGDLDEDS-----LAVDELEYFNPEYLEIHRIIA-------------HRKDTPMPADPNFPDA-------------------PVDDGMRYYIKWRILSYEEATWERACDIKDDA---------------ALAKYKASIVVPDE----------EIWKVRPRPSIREYRKLENSPKFGEDQS------------------------LSLRAYQLEGLNWLLWNWYNERPSILADEMGLGKTIQTLSFLNLLRDDHKIRIRGPFLIVAPLSLIVQWQNECETWTTMNCVVYHGNSASREIIRDFEFNYLDENLRPDRKKPYRFNILVTTYEVAIKDIAVLSKIHWRCLVVDEAHRLKNQSSRLVEQMRSLRRDHCVLLTGTPLQNKTEELWALLNFLDGRSFPSVADFLEKFGDLHEAQQVADLHKMLKPYLLRRVKEDVEKSLPPKEET 663

[Close]

BLAST of mRNA_L-elsbetiae_contig6791.15548.1 vs. uniprot
Match: A0A8K1FFJ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFJ2_PYTOL)

HSP 1 Score: 298 bits (763), Expect = 1.270e-85
Identity = 202/496 (40.73%), Postives = 257/496 (51.81%), Query Frame = 0

Query:   27 YLVKWKNLSYLHNSWEMSKHLEDARHPSNRQKLLRYKNKMEQEHGLQWRKVLEDEDREEEGEGATVEKEYFPADMVEVQRIITCEATSTRHEAVLRQERHDILSGDSDSNQARGGXXXXXXXXXXXXXXXXXXXSMVLYLVKWRGLPYDQSSWEHFKDIRFAADQILDFWDFCRPGPKEMAEVEAQLAVGGKGHGGGIRGGGETLKGHNLRVRDFTKLMVSPVFGVTKAEKAAKGSSVGXXXXXXXXXXXXXGLTLRDYQLEGVNWLLWNWWNHRSSILADEMGLGKTIQTVGFLDQLWNHKLTGIRGPFCVVGPLSLVAQWQSE----------------------------KLRSAGR------VKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADGRQFFDQSGFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPKAST 488
            Y +KWK  SYLH+SWE S+ +     P N+Q++ R+    E+EH     + +  ED EEEGE      EYF  + +E+ R+I     S R +A +  +  +      D                            + YLVKWR LPY  ++WE   D++  A  I  +       PKE  E   +  +                       R++ KL  SP FG   +                        L LR YQLEG+NWLLWNW+N R SILADEMGLGKTIQT+ FLD++        RGPF VV PLSL+AQWQSE                             + S  R       KF+IL+TTYEVA+KD+  LS+I W+ LVVDEAHRLKN  S+L ++L SL RDH +LLTGTPLQN+TEELWALLNF DG+ F   + F ++FGDL  + QVA LH+ML+PYLLRRVKEDVEKSLPPK  T
Sbjct:  278 YYIKWKGFSYLHSSWE-SRDVLLGIDPGNKQRIKRFH---EKEHPHHHHQRVFSEDMEEEGE-----MEYFNPEYLEIHRVI-----SHRQDAPVPAD-PEFPDAPVDDG--------------------------LRYLVKWRVLPYTDATWERACDLKDDA-AIEKYKMSLDVPPKEEWEPLPRPTI-----------------------REYRKLEESPTFGADNS------------------------LKLRAYQLEGLNWLLWNWYNERPSILADEMGLGKTIQTLAFLDRMRRSDKIMCRGPFLVVAPLSLIAQWQSECETWTTMNCVVYHGNTEAREIIRDFEFYYMDSQNRPDKKKPFKFNILVTTYEVAIKDISILSKIRWRCLVVDEAHRLKNQSSRLVEQLRSLRRDHCVLLTGTPLQNKTEELWALLNFLDGKSFPSVTDFLDKFGDLHEAQQVADLHKMLKPYLLRRVKEDVEKSLPPKEET 684

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig6791.15548.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig6791.15548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LDU9_ECTSI	1.030e-246	84.08	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KVU7_9PHAE	9.010e-189	64.46	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A448Z3J7_9STRA	1.260e-101	39.59	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]
A0A7S4QWE4_9STRA	9.250e-101	40.04	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]
A0A1Z5JDN6_FISSO	3.960e-92	37.60	Chromodomain-helicase-DNA-binding protein 6 n=2 Ta...	[more]
A0A835Z670_9STRA	7.630e-90	60.16	SNF2 family N-terminal domain-containing protein n...	[more]
A0A4D9D793_9STRA	2.320e-89	39.96	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
B8CAT3_THAPS	1.160e-88	39.57	Chromodomain-helicase (Fragment) n=1 Tax=Thalassio...	[more]
A0A2P4YLW4_9STRA	2.560e-86	39.16	Chromodomain-helicase-DNA-binding protein (Fragmen...	[more]
A0A8K1FFJ2_PYTOL	1.270e-85	40.73	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 100..200 e-value: 6.3E-5 score: 32.4 coord: 15..65 e-value: 0.38 score: 19.6
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 102..197 score: 9.806
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 278..450 e-value: 7.3E-25 score: 98.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 294..438 score: 20.77
IPR000330	SNF2-related, N-terminal domain	PFAM	PF00176	SNF2_N	coord: 360..486 e-value: 2.9E-30 score: 105.2
IPR000330	SNF2-related, N-terminal domain	PFAM	PF00176	SNF2_N	coord: 299..351 e-value: 2.2E-8 score: 33.2
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 25..50 e-value: 6.8E-8 score: 32.3 coord: 163..196 e-value: 5.4E-8 score: 32.6
None	No IPR available	GENE3D	2.40.50.40		coord: 154..196 e-value: 3.1E-9 score: 38.2
None	No IPR available	GENE3D	2.40.50.40		coord: 18..72 e-value: 9.1E-10 score: 40.6
None	No IPR available	PANTHER	PTHR45623	FAMILY NOT NAMED	coord: 357..485
None	No IPR available	PANTHER	PTHR45623	FAMILY NOT NAMED	coord: 24..351
None	No IPR available	PANTHER	PTHR45623:SF11	KISMET, ISOFORM C	coord: 357..485
None	No IPR available	PANTHER	PTHR45623:SF11	KISMET, ISOFORM C	coord: 24..351
IPR038718	SNF2-like, N-terminal domain superfamily	GENE3D	3.40.50.10810		coord: 355..488 e-value: 3.6E-44 score: 152.6 coord: 280..351 e-value: 1.8E-24 score: 88.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 279..473
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 24..59
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 95..197

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig6791	contig	L-elsbetiae_contig6791:577..10584 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig6791.15548.1	mRNA_L-elsbetiae_contig6791.15548.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig6791 550..10584 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig6791.15548.1 ID=prot_L-elsbetiae_contig6791.15548.1|Name=mRNA_L-elsbetiae_contig6791.15548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=488bp
MDVDDGAGVTAGNGGGVGGDLVRKEMYLVKWKNLSYLHNSWEMSKHLEDA
RHPSNRQKLLRYKNKMEQEHGLQWRKVLEDEDREEEGEGATVEKEYFPAD
MVEVQRIITCEATSTRHEAVLRQERHDILSGDSDSNQARGGEGGGHGGGG
GGGGDDPDPDSMVLYLVKWRGLPYDQSSWEHFKDIRFAADQILDFWDFCR
PGPKEMAEVEAQLAVGGKGHGGGIRGGGETLKGHNLRVRDFTKLMVSPVF
GVTKAEKAAKGSSVGSGGSGAAPAGGGGGLTLRDYQLEGVNWLLWNWWNH
RSSILADEMGLGKTIQTVGFLDQLWNHKLTGIRGPFCVVGPLSLVAQWQS
EKLRSAGRVKFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSK
LFQELGSLPRDHSLLLTGTPLQNRTEELWALLNFADGRQFFDQSGFKEQF
GDLKGSSQVAKLHEMLRPYLLRRVKEDVEKSLPPKAST

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000953	Chromo/chromo_shadow_dom
IPR014001	Helicase_ATP-bd
IPR000330	SNF2_N
IPR023780	Chromo_domain
IPR038718	SNF2-like_sf
IPR027417	P-loop_NTPase
IPR016197	Chromo-like_dom_sf