prot_L-elsbetiae_contig6789.15544.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6789.15544.1
Unique Nameprot_L-elsbetiae_contig6789.15544.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length112
Homology
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BLAST of mRNA_L-elsbetiae_contig6789.15544.1 vs. uniprot
Match: D7FR41_ECTSI (Voltage-gated Ion Channel (VIC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR41_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.810e-37
Identity = 83/114 (72.81%), Postives = 90/114 (78.95%), Query Frame = 0 
Query:    1 MQESLCRLETENASLRALVDSMQMDLQMANARLYDELQTPSRDRSPSPARAPKHRGGVGGVDASGSLGKSS---SFMSPENMAPLRKRVGSANSSIGGELEAIVETEDEEVSIV 111
            MQESL R+E ENASLRALVDSMQMDLQMANARLYDE+QTPSRDRSPSP R P  RG   GVD S   GK     SF+SP++MAPLRKRVGS  SS+GG +EAI E EDEEV IV
Sbjct:  933 MQESLSRMEAENASLRALVDSMQMDLQMANARLYDEMQTPSRDRSPSPGRTPSRRGS--GVDGSAHPGKPPLPLSFISPDSMAPLRKRVGSGTSSLGG-MEAIAEIEDEEVGIV 1043
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BLAST of mRNA_L-elsbetiae_contig6789.15544.1 vs. uniprot
Match: A0A6H5L0T6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T6_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 4.290e-34
Identity = 79/114 (69.30%), Postives = 88/114 (77.19%), Query Frame = 0 
Query:    1 MQESLCRLETENASLRALVDSMQMDLQMANARLYDELQTPSRDRSPSPARAPKHRGGVGGVDASGSLGKSS---SFMSPENMAPLRKRVGSANSSIGGELEAIVETEDEEVSIV 111
            MQE+L R+E ENASLRALVDSMQMDLQMANARLYDE+QT SRDRSPSP R P  RG   GVDAS   GK     SF+SP+++AP RKR GS  SS+GG +EAI E EDEEV IV
Sbjct: 1068 MQENLNRVEAENASLRALVDSMQMDLQMANARLYDEMQTKSRDRSPSPGRTPSRRGS--GVDASAHPGKPPLPLSFISPDSVAPPRKRAGSGTSSLGG-MEAIAEIEDEEVGIV 1178
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6789.15544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR41_ECTSI1.810e-3772.81Voltage-gated Ion Channel (VIC) Superfamily n=1 Ta... [more]
A0A6H5L0T6_9PHAE4.290e-3469.30Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6789contigL-elsbetiae_contig6789:2854..4911 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6789.15544.1mRNA_L-elsbetiae_contig6789.15544.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6789 2624..5433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6789.15544.1 ID=prot_L-elsbetiae_contig6789.15544.1|Name=mRNA_L-elsbetiae_contig6789.15544.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp
MQESLCRLETENASLRALVDSMQMDLQMANARLYDELQTPSRDRSPSPAR
APKHRGGVGGVDASGSLGKSSSFMSPENMAPLRKRVGSANSSIGGELEAI
VETEDEEVSIV*
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