prot_L-elsbetiae_contig6784.15537.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6784.15537.1
Unique Nameprot_L-elsbetiae_contig6784.15537.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length323
Homology
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BLAST of mRNA_L-elsbetiae_contig6784.15537.1 vs. uniprot
Match: D8LLV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV5_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 3.050e-89
Identity = 217/332 (65.36%), Postives = 235/332 (70.78%), Query Frame = 0 
Query:    1 QVAILVEDVTCRMEEASASQLASVQGRLADGVVSALACAEDPSALQAAGAHVVKARSRLYKSRRVQACLDLLAAFLRALP--DPAPTASTARSPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNG-------ARRSEADLARALVGVAKLLHDSLDLLSSHERQRQASSSAVDLTCDMVDRIGRGWVQVQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASGAAADDGGGTGEASRLALLAECRQAFWGMDEVTDRLVLAAVGLSVRAWRAGSNATARAALCFCSLTVPSVPSAVRRLALLQLCATTALQVGKPSLADALFR 323
            +VAIL+EDV CRME+AS S+LASVQGRLADGV  ALACA+DPSAL+AAG HVVK    L KSRR QACLDLLAA LR+LP   P PT   +  P     XXXXXXXXXXX                 X  G       A + E +LARALVGVAKLLHDS DLLSS ERQRQ   SAV LTCDMVDR+GRGW +   XXXXXXXXXXXXXXXX                             EASRL +LAECRQAFWGMDEVTDRLVLAA GLS+RAWRAGS ATARAALCFCSLTVPSVPSA+RRLALLQLCA+TALQ+GKP+LADALFR
Sbjct:  775 EVAILMEDVACRMEDASTSELASVQGRLADGVAGALACAKDPSALRAAGVHVVKVLGVLDKSRRAQACLDLLAALLRSLPRHTPPPTGRVSARPATTPQXXXXXXXXXXXPESSAPGEREDGRSKSGXXXGEEKKKGAAIKGEVELARALVGVAKLLHDSFDLLSSGERQRQ---SAVALTCDMVDRVGRGWAEPPQXXXXXXXXXXXXXXXX-----------------------------EASRLEVLAECRQAFWGMDEVTDRLVLAAAGLSLRAWRAGSTATARAALCFCSLTVPSVPSALRRLALLQLCASTALQIGKPALADALFR 1074
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BLAST of mRNA_L-elsbetiae_contig6784.15537.1 vs. uniprot
Match: A0A6H5JSK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK9_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 1.410e-79
Identity = 234/445 (52.58%), Postives = 250/445 (56.18%), Query Frame = 0 
Query:    1 QVAILVEDVTCRMEEASASQLASVQGRLADGVVSALACAEDPSALQAAGAHVVKARSRLY-----------------------------------------------------------------------------------------KSRRVQACLDLLAAFLRALP--DPAPT-------ASTARSPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNGAR-RSEADLARALVGVAKLLHDSLDLLSSHERQRQASS----------------------SAVDLTCDMVDRIGRGWVQV-QPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASGAAADDGGGTGEASRLALLAECRQAFWGMDEVTDRLVLAAVGLSVRAWRAGSNATARAALCFCSLTVPSVPSAVRRLALLQLCATTALQVGKPSLADALFR 323
            +VAIL+EDV CRME+ASAS+LASVQGRLADGVVSALACA+DPSAL+AAG HVVK    +Y                                                                                         KSRR QACLDLLAAFLRALP   P PT       A+T      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GA    E +LARALV VAKLLHDS DLLSS ERQRQAS                       SAV LTCDMVDR+GRGW Q  QP                                         GGTGEASRL +LAECRQAFWGMDEVTDRLVLAA GLS+RAWRAGS ATARAALCFCSLTVPSVPSA+RRLALLQLCA+TALQ+GKP+LADALFR
Sbjct:  374 EVAILMEDVACRMEDASASELASVQGRLADGVVSALACAKDPSALRAAGGHVVKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYQKEREVGQRDSVLAVLDKSRRAQACLDLLAAFLRALPRHTPPPTGRVSARSATTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKGATVNGEVELARALVRVAKLLHDSFDLLSSGERQRQASGAGGWSGCLVQRTWFLVFVCPRQSAVALTCDMVDRVGRGWAQPPQP-----------------------------------------GGTGEASRLEVLAECRQAFWGMDEVTDRLVLAAAGLSLRAWRAGSTATARAALCFCSLTVPSVPSALRRLALLQLCASTALQIGKPALADALFR 777
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6784.15537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLV5_ECTSI3.050e-8965.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSK9_9PHAE1.410e-7952.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029705VPS35 endosomal protein sorting factor-likePANTHERPTHR13673ESOPHAGEAL CANCER ASSOCIATED PROTEINcoord: 138..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6784contigL-elsbetiae_contig6784:260..2519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6784.15537.1mRNA_L-elsbetiae_contig6784.15537.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6784 260..2519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6784.15537.1 ID=prot_L-elsbetiae_contig6784.15537.1|Name=mRNA_L-elsbetiae_contig6784.15537.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=323bp
QVAILVEDVTCRMEEASASQLASVQGRLADGVVSALACAEDPSALQAAGA
HVVKARSRLYKSRRVQACLDLLAAFLRALPDPAPTASTARSPLPPPPPPP
EDKGAAAKSGSGQIVGGGGGGGEGGAGNGARRSEADLARALVGVAKLLHD
SLDLLSSHERQRQASSSAVDLTCDMVDRIGRGWVQVQPPPAPPAAAAATA
TATAGAGGGGGAGAGGGGGKASGAAADDGGGTGEASRLALLAECRQAFWG
MDEVTDRLVLAAVGLSVRAWRAGSNATARAALCFCSLTVPSVPSAVRRLA
LLQLCATTALQVGKPSLADALFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029705VPS35L