prot_L-elsbetiae_contig6742.15491.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6742.15491.1
Unique Nameprot_L-elsbetiae_contig6742.15491.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length163
Homology
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: A0A6H5KX19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX19_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 5.660e-20
Identity = 54/137 (39.42%), Postives = 86/137 (62.77%), Query Frame = 0
Query:    3 GMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAINNACSPDRRGQLNGIASSVASVAGAVGPAVWLALFAFSIEG-GRHAFPFDFHLTFYVMA 138
            G+ + TF+L+V P L KR+G+   +R    + +  + + P LS L+G+G  ++V S+ + F   V   + +T ++LA NNA  P R   LNG++  + S+A AVGPA + A+FA+SI+  GR  FP D+HL FY++A
Sbjct:  558 GVGMLTFQLVVYPWLSKRIGVTGSQRWACFLAILVYAVFPFLSRLRGSGVLLVVGSIVLNFFSNVTATAVFTNVALATNNAVEPSRWATLNGLSMMLGSLAKAVGPAFFSAIFAWSIDDDGRRPFPLDYHLVFYLLA 694          
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: A0A7S0UIP9_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UIP9_HEMAN)

HSP 1 Score: 56.2 bits (134), Expect = 1.880e-6
Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 0
Query:   68 ACDSFYTGISLAINNACSPDRRGQLNGIASSVASVAGAVGPAVWLALFAFSIEGGRHAFPFDFHLTFYVMAALRLAVAF 146
            A  S +T +SL +NN+      G +NG++ + AS+A AV PA    +F+ S++ GR  +P DFHL FYV+AA+ + + F
Sbjct:  131 AFSSGFTSVSLLVNNSAPKRVIGSINGMSQTCASLASAVAPAFAGNIFSLSLQMGR-PWPLDFHLVFYVVAAISVVMLF 208          
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: D8LJX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX7_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 3.580e-5
Identity = 47/160 (29.38%), Postives = 76/160 (47.50%), Query Frame = 0
Query:    1 MCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAINNACS-PDR-RGQLNGIASSVASVAGAVGPAVWLALFAFSIEGGRHAFPFD---FHLTFYVMAALRLAVAFCMWDASLQE 155
            M G+ +  F+LL+LP L+K VGI   +RVG  +   AF+ +P +  L      +  ASVA     + +C      +++++ +    P R RG+L G+ +   S+   +GPA +   +A+S+     A  FD   F   F+V A L    A   W     E
Sbjct:  222 MTGLFMACFQLLLLPPLIKVVGITNWQRVGFVVGALAFIAIPSVRLLSWNYPSLFSASVAA--NTFASCGLAAVTLAMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAITYAWSVSPSSSAAGFDWVNFRFVFWVSAVLLALCAVLAWPTLTAE 379          
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: A0A6H5K5T8_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T8_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 3.850e-5
Identity = 47/160 (29.38%), Postives = 76/160 (47.50%), Query Frame = 0
Query:    1 MCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAINNACS-PDR-RGQLNGIASSVASVAGAVGPAVWLALFAFSIEGGRHAFPFD---FHLTFYVMAALRLAVAFCMWDASLQE 155
            M G+ +  F+LL+LP L+K VGI   +RVG  +   AF+ +P + SL      +  ASVAV    + +C      +++++ +    P R RG+L G+ +   S+   +GPA +   +A+S+     A   D   F   F+  A L    A   W     E
Sbjct:  390 MTGLFMACFQLLLLPPLIKVVGITKWQRVGFCVGALAFIAIPSVRSLSWNYPSLFSASVAV--NTFASCGLAAVALTMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAISYAWSVSPSSSAAGVDWVNFRFVFWASAVLLAMCAVLAWSTLTAE 547          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KX19_9PHAE5.660e-2039.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0UIP9_HEMAN1.880e-640.51Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
D8LJX7_ECTSI3.580e-529.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5T8_9PHAE3.850e-529.38MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..155
e-value: 3.7E-7
score: 31.7
NoneNo IPR availablePANTHERPTHR23504:SF15PROTEIN ZINC INDUCED FACILITATOR-LIKE 1coord: 3..149
NoneNo IPR availablePANTHERPTHR23504FAMILY NOT NAMEDcoord: 3..149
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..149
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 150..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..129
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..118
NoneNo IPR availableTMHMMTMhelixcoord: 29..46
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 51..73
NoneNo IPR availableTMHMMTMhelixcoord: 131..153
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 6..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6742contigL-elsbetiae_contig6742:5406..6230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6742.15491.1mRNA_L-elsbetiae_contig6742.15491.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6742 4158..6660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6742.15491.1 ID=prot_L-elsbetiae_contig6742.15491.1|Name=mRNA_L-elsbetiae_contig6742.15491.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=163bp
MCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGT
GYPIIVASVAVLFTIYVACDSFYTGISLAINNACSPDRRGQLNGIASSVA
SVAGAVGPAVWLALFAFSIEGGRHAFPFDFHLTFYVMAALRLAVAFCMWD
ASLQEEGVADHN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf