prot_L-elsbetiae_contig6722.15466.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6722.15466.1
Unique Nameprot_L-elsbetiae_contig6722.15466.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length102
Homology
BLAST of mRNA_L-elsbetiae_contig6722.15466.1 vs. uniprot
Match: A0A6H5JTT5_9PHAE (SGNH_hydro domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT5_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 6.350e-19
Identity = 52/115 (45.22%), Postives = 70/115 (60.87%), Query Frame = 0
Query:    4 LDLEYLLSYEGMGAVSVAVTS-----------NEIGPTMVIDGLWESRASVPWFRTVPIP--GDSKSVLVTLSIMSAENEEDKKPSLS---NSDMNKPS-LRGDRKFKLISMQCC 101
            LD+EYL+SYEGMG+  V + +           N    T+++DGLW+S ASVP F T+PIP  G  + V V++ IMSAE E     S       D+++   +RGDRKFKLIS+QCC
Sbjct:  417 LDMEYLVSYEGMGSAMVEIEAGPTAEDVQDEGNSSTSTVIVDGLWDSHASVPSFETIPIPDAGGGRHVRVSIRIMSAEGERSSSSSRLFDFKGDLDREKEVRGDRKFKLISLQCC 531          
BLAST of mRNA_L-elsbetiae_contig6722.15466.1 vs. uniprot
Match: D7FNS9_ECTSI (SGNH_hydro domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNS9_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 2.000e-18
Identity = 53/115 (46.09%), Postives = 67/115 (58.26%), Query Frame = 0
Query:    4 LDLEYLLSYEGMGAVSVAV---------TSNEIGPTMVIDGLWESRASVPWFRTVPIPGDSKS-----VLVTLSIMSAENEEDKKPSLS---NSDMNKPSLRGDRKFKLISMQCC 101
            LD+EYL+SYEGMGAV V+V          +N     +V+DGLW S  S+P F T+ IP    S     V VTL I+S E E    P L     +D  + S+RGDRKFKL+S+QCC
Sbjct:  284 LDVEYLVSYEGMGAVKVSVGQVDAHGSSAANNSTSVVVVDGLWGSHVSIPAFETIDIPDKGTSAPESMVRVTLEILSVEGERLYTPHLFAGVGNDEKQTSVRGDRKFKLLSLQCC 398          
BLAST of mRNA_L-elsbetiae_contig6722.15466.1 vs. uniprot
Match: D8LJK3_ECTSI (SGNH_hydro domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK3_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 5.520e-18
Identity = 53/118 (44.92%), Postives = 68/118 (57.63%), Query Frame = 0
Query:    4 LDLEYLLSYEGMGAVSVAVTSNEIGPT--------------MVIDGLWESRASVPWFRTVPIP--GDSKSVLVTLSIMSAENEEDKKPS----LSNSDMNKPSLRGDRKFKLISMQCC 101
            LD+EYL+SY GMGAV V +   E GPT              +++DGLW+S ASV  F T+PIP  G   +V V+L I+SAE E     S        +  +  +RGDRKFKLIS+QCC
Sbjct:  392 LDIEYLVSYAGMGAVMVEI---EAGPTAEDLQDEGISSTSTVIVDGLWDSHASVSSFETIPIPDAGGGGNVRVSLRILSAEEEHSSSSSRLFDFKGDEDREKEVRGDRKFKLISLQCC 506          
BLAST of mRNA_L-elsbetiae_contig6722.15466.1 vs. uniprot
Match: A0A6H5JFN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFN1_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 3.810e-17
Identity = 51/118 (43.22%), Postives = 67/118 (56.78%), Query Frame = 0
Query:    4 LDLEYLLSYEGMGAVSVAVTSNEIGPT--------------MVIDGLWESRASVPWFRTVPIP--GDSKSVLVTLSIMSAENEEDKKPS----LSNSDMNKPSLRGDRKFKLISMQCC 101
            LD+EYL+SY GMG+V V +   E GPT              +++DGLW+S ASV  F T+PIP  G   +V V+  I+SAE E     S        +  +  +RGDRKFKLIS+QCC
Sbjct:  242 LDMEYLVSYVGMGSVMVEI---EAGPTAEDLQDEGISSTSTVIVDGLWDSHASVSSFETIPIPDAGGGGNVRVSFRILSAEEERSSSSSRLFDFKGDEDREKEVRGDRKFKLISLQCC 356          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6722.15466.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JTT5_9PHAE6.350e-1945.22SGNH_hydro domain-containing protein n=1 Tax=Ectoc... [more]
D7FNS9_ECTSI2.000e-1846.09SGNH_hydro domain-containing protein n=1 Tax=Ectoc... [more]
D8LJK3_ECTSI5.520e-1844.92SGNH_hydro domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JFN1_9PHAE3.810e-1743.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6722contigL-elsbetiae_contig6722:8816..9121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6722.15466.1mRNA_L-elsbetiae_contig6722.15466.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6722 7068..9374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6722.15466.1 ID=prot_L-elsbetiae_contig6722.15466.1|Name=mRNA_L-elsbetiae_contig6722.15466.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
MRHLDLEYLLSYEGMGAVSVAVTSNEIGPTMVIDGLWESRASVPWFRTVP
IPGDSKSVLVTLSIMSAENEEDKKPSLSNSDMNKPSLRGDRKFKLISMQC
C*
back to top