prot_L-elsbetiae_contig671.15452.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig671.15452.1
Unique Nameprot_L-elsbetiae_contig671.15452.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length153
Homology
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BLAST of mRNA_L-elsbetiae_contig671.15452.1 vs. uniprot
Match: D8LGD5_ECTSI (GRIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD5_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 4.110e-54
Identity = 114/139 (82.01%), Postives = 120/139 (86.33%), Query Frame = 0 
Query:    1 MRNELAEALLRVEQLSAQESVLKATIRALETDLKTERQARDLGTGEAAPINVAYLKSAVVRYMSTRDAGEQRSLLRVISTILQMTRQEAADVEARIAELEKTMVGRAGXXXXXXXXXXXXVXXXXXXLVWGG-RAAPAE 138
            MRNELAEALLRVEQLSAQES+LK+TIRALETDL TER   +LG+GE APINVAYLKSAVVRYMSTRDAGEQRSLLRVISTILQ T+QE ADVEARI ELEKTMV RAG     XXXXXXXV XX   LVWGG RAAPA+
Sbjct:   24 MRNELAEALLRVEQLSAQESLLKSTIRALETDLVTER---NLGSGETAPINVAYLKSAVVRYMSTRDAGEQRSLLRVISTILQFTKQEVADVEARITELEKTMVRRAGSMVGGXXXXXXXVVXXVVGLVWGGGRAAPAD 159
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BLAST of mRNA_L-elsbetiae_contig671.15452.1 vs. uniprot
Match: A0A6H5KSR4_9PHAE (GRIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR4_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.580e-47
Identity = 109/139 (78.42%), Postives = 115/139 (82.73%), Query Frame = 0 
Query:    1 MRNELAEALLRVEQLSAQESVLKATIRALETDLKTERQARDLGTGEAAPINVAYLKSAVVRYMSTRDAGEQRSLLRVISTILQMTRQEAADVEARIAELEKTMVGRAGXXXXXXXXXXXXVXXXXXXLVWGG-RAAPAE 138
            MRNELAEALLRVEQLSAQES+LK+TIRALETDL TER   +LG+GE APINVAYLKSAVVRYMSTRDAGEQRSLLRVISTILQ T+QE ADVEARI ELEKTMV RAG       XXXXXV      LVWGG RAA A+
Sbjct: 1597 MRNELAEALLRVEQLSAQESLLKSTIRALETDLVTER---NLGSGETAPINVAYLKSAVVRYMSTRDAGEQRSLLRVISTILQFTKQEVADVEARITELEKTMVRRAGSMVGGAGXXXXXVVGGVVGLVWGGGRAAAAD 1732
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig671.15452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGD5_ECTSI4.110e-5482.01GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KSR4_9PHAE1.580e-4778.42GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 12..32
NoneNo IPR availableCOILSCoilCoilcoord: 82..102
IPR000237GRIP domainSMARTSM007551gripcoord: 48..95
e-value: 2.9E-5
score: 33.5
IPR000237GRIP domainPFAMPF01465GRIPcoord: 50..91
e-value: 1.1E-12
score: 47.6
IPR000237GRIP domainPROSITEPS50913GRIPcoord: 45..95
score: 12.389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig671contigL-elsbetiae_contig671:29451..31525 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig671.15452.1mRNA_L-elsbetiae_contig671.15452.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig671 29403..32332 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig671.15452.1 ID=prot_L-elsbetiae_contig671.15452.1|Name=mRNA_L-elsbetiae_contig671.15452.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp
MRNELAEALLRVEQLSAQESVLKATIRALETDLKTERQARDLGTGEAAPI
NVAYLKSAVVRYMSTRDAGEQRSLLRVISTILQMTRQEAADVEARIAELE
KTMVGRAGSMVGGAGRKVGGVVGGVVGLVWGGRAAPAESYTEPGIDGTAP
EI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000237GRIP_dom