prot_L-elsbetiae_contig67.15435.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig67.15435.1
Unique Nameprot_L-elsbetiae_contig67.15435.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length158
Homology
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BLAST of mRNA_L-elsbetiae_contig67.15435.1 vs. uniprot
Match: A0A6H5K415_9PHAE (DUF4042 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K415_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 1.300e-65
Identity = 115/138 (83.33%), Postives = 119/138 (86.23%), Query Frame = 0 
Query:   15 KLWEDLVQKHLQRALEDPYHGVRAVACSCHACLLNSDWEAFSCRERGRCLDRVLAATRDRAAGVNILACRVVAGVMTMAGQDGAARWCRNPEFLGRCAARLQEMMEDPKATIRAQAMLAVGNLSCSLHGIRSRRPPTP 152
            K+W DLVQKHLQRALEDPYHGVRAVACSCHA LL SDWEAFS  ER RCL RVLAATRDRAAGVNILACRVVAGVMTMAG++GAA WCR+PEFL RCAARLQEMMED KA      MLAVGNLSCSLHGIRSRR   P
Sbjct: 1004 KVWRDLVQKHLQRALEDPYHGVRAVACSCHASLLKSDWEAFSDPERDRCLGRVLAATRDRAAGVNILACRVVAGVMTMAGEEGAAAWCRDPEFLDRCAARLQEMMEDTKA------MLAVGNLSCSLHGIRSRRRSLP 1135
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BLAST of mRNA_L-elsbetiae_contig67.15435.1 vs. uniprot
Match: D7FH12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH12_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.100e-57
Identity = 99/111 (89.19%), Postives = 102/111 (91.89%), Query Frame = 0 
Query:   13 GGKLWEDLVQKHLQRALEDPYHGVRAVACSCHACLLNSDWEAFSCRERGRCLDRVLAATRDRAAGVNILACRVVAGVMTMAGQDGAARWCRNPEFLGRCAARLQEMMEDPK 123
            GGK+W DLVQKHLQRALEDPYHGVRAVACSCHA LL SDWEAFS RER RCL RVLAATRDRAAGVNILACRVVAGVMTMAGQ+GAA WCR+PEFL RCAARLQEMMED K
Sbjct:  922 GGKVWRDLVQKHLQRALEDPYHGVRAVACSCHASLLKSDWEAFSDRERERCLGRVLAATRDRAAGVNILACRVVAGVMTMAGQEGAAAWCRDPEFLHRCAARLQEMMEDTK 1032
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig67.15435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K415_9PHAE1.300e-6583.33DUF4042 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FH12_ECTSI2.100e-5789.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 15..146
e-value: 3.8E-5
score: 25.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 19..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig67contigL-elsbetiae_contig67:8295..9505 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig67.15435.1mRNA_L-elsbetiae_contig67.15435.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig67 8295..9505 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig67.15435.1 ID=prot_L-elsbetiae_contig67.15435.1|Name=mRNA_L-elsbetiae_contig67.15435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
MAAKGGGVGGGSGGKLWEDLVQKHLQRALEDPYHGVRAVACSCHACLLNS
DWEAFSCRERGRCLDRVLAATRDRAAGVNILACRVVAGVMTMAGQDGAAR
WCRNPEFLGRCAARLQEMMEDPKATIRAQAMLAVGNLSCSLHGIRSRRPP
TPSSSALD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold