prot_L-elsbetiae_contig668.15412.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig668.15412.1
Unique Nameprot_L-elsbetiae_contig668.15412.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length134
Homology
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BLAST of mRNA_L-elsbetiae_contig668.15412.1 vs. uniprot
Match: D8LGG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG2_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 3.100e-47
Identity = 91/126 (72.22%), Postives = 103/126 (81.75%), Query Frame = 0 
Query:    1 MDAGDLDGSATDLQEAAKLAPDDQSKPIRFALKSLRIKQKEAQAARRRVWGGVFRRRGDTAPAPGRRQVEEAAARARGEGLVDPRRGGGSGDGDKPGGMD-DKWLYLSIAVGVVAFALAGFAAAKF 125
            MDAGDL+GS+TDLQEAAKLAP D  KP+R ALKSLRIKQKE +AARR +WGGVF+R      APGRRQVEEAAARARGE L DP RGGG   GD+ GG+  D+ LY SIAVG+VAFA+AGFAAAK+
Sbjct:    1 MDAGDLEGSSTDLQEAAKLAPGD--KPVRLALKSLRIKQKEVEAARRSLWGGVFKRGAAKTTAPGRRQVEEAAARARGERLQDPGRGGG---GDRRGGVGGDRLLYASIAVGLVAFAVAGFAAAKY 121
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BLAST of mRNA_L-elsbetiae_contig668.15412.1 vs. uniprot
Match: A0A6H5K9H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9H3_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 1.480e-44
Identity = 89/126 (70.63%), Postives = 102/126 (80.95%), Query Frame = 0 
Query:    1 MDAGDLDGSATDLQEAAKLAPDDQSKPIRFALKSLRIKQKEAQAARRRVWGGVFRRRGDTAPAPGRRQVEEAAARARGEGLVDPRRGGGSGDGDKPGGMD-DKWLYLSIAVGVVAFALAGFAAAKF 125
            MDAGDL+GS+TDL+EAAKLAP D  KP+R ALKSLRIKQKE +AARR +WGGVF+      PAPG+RQVEEAAARARGEGL DP RGGG   GD+ GG   D+ LY SIAVG+VAFA+AGF AAK+
Sbjct:  151 MDAGDLEGSSTDLKEAAKLAPGD--KPVRLALKSLRIKQKEVEAARRSLWGGVFKGGAAKTPAPGQRQVEEAAARARGEGLQDPGRGGG---GDRRGGTGGDRLLYASIAVGLVAFAVAGFTAAKY 271
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig668.15412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGG2_ECTSI3.100e-4772.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9H3_9PHAE1.480e-4470.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 124..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..123
NoneNo IPR availableTMHMMTMhelixcoord: 103..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig668contigL-elsbetiae_contig668:23015..23641 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig668.15412.1mRNA_L-elsbetiae_contig668.15412.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig668 21917..24016 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig668.15412.1 ID=prot_L-elsbetiae_contig668.15412.1|Name=mRNA_L-elsbetiae_contig668.15412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp
MDAGDLDGSATDLQEAAKLAPDDQSKPIRFALKSLRIKQKEAQAARRRVW
GGVFRRRGDTAPAPGRRQVEEAAARARGEGLVDPRRGGGSGDGDKPGGMD
DKWLYLSIAVGVVAFALAGFAAAKFTQSGPPTA*
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